Salvelinus fontinalis (brook trout): 129826526
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Entry
129826526 CDS
T11136
Name
(RefSeq) splicing regulator ARVCF-like isoform X1
KO
K28154
splicing regulator ARVCF
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129826526
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129826526
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
Arm_2
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
129826526
NCBI-ProteinID:
XP_055743328
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All DBs
Position
28:27030312..27408451
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AA seq
1043 aa
AA seq
DB search
MEDYDVRSAASILASVKEQEARFERLTRALEEERRNVSLQLERSNVPPDRLGGTGPSANL
PPNSQPLAWQQVVMQEQSPSNQTSLAMMQEPQEMVEETVTIEEDPGTPTSHVSVVTSDDG
TTRRTETKDMSTNLKVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYLK
NGERYITTPQATSTLTRSYNNYNDSYSDALPPDAGGSQYGGRHYGLHDGYGIGDATDNYG
SLSRGVNFRPPRYPYAMANSYRPENSYGTLPIRKDDYGHVAQPQVPMGNSSVDLNRSQPE
RFQPEPYGLEDDRRSLGPEEEEPYDLEPDYSTASRCQGTLPGTNRGRTMREPLRDGPRIR
GYEDPIEAEMIDERHPYIHGMYPAPLAQPERGSMASLDRLAGRRSPSIDSIRKDPRWRDP
DLQEVIAMLGHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKGIPVLASLLDHPKAEVHR
KACGALRNISYGKDHDNKVAIKNCDGIPALVRLLRKTNDMEVRELITGTLWNLSSYEPLK
MVIINHGLQTLTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARR
RLRECEGLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHKEIPGAEKFTDPSVL
QAPGSAGPQRKKKDDAGCFGGKKAKEEWFNQARKNGENDKNYDTLDLPKRTEPTKGFELL
YQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELL
RSDSDKVVRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAIL
NTIHEIVTDSSENARSLIQAQAIEKLVAINKTSQSPREDKAASHVLQTVWSYKDLRNALT
KEGWNKSHFQPTATGAPKAAKNGKPGYDDTTLPLMEKNQGQSVMAGETGDPPGLAYCGEL
STKKNGSGDMIPMDELGPDGYSTIDQRDKDCKYKSSGDGSVDLSEREPLKNDTNRKHYVR
SNRPAVKLVDACDVKPQPVDSWV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggaggattatgacgtgcgctcggccgccagtatcctggcctcggtgaaagagcaggag
gcgcgcttcgagcgtctgacccgggccctggaggaggagcgacgcaacgtctccctgcag
ctcgagcgttccaatgtaccccccgacaggttgggagggactgggcctagcgctaacctg
ccacccaacagccaacccctggcctggcagcaggtggtgatgcaggagcagagccccagt
aaccagacgtctctggccatgatgcaggagccccaggagatggtggaggagacggtcacc
atcgaggaggaccctggcacgcccacctcccacgtgtccgttgtcacctccgacgacggc
accacgcgacgcacagaaaccaaggatatgtcaactaacctgaaggtgactaagatggtg
aagacggtgaccacgcggacggttcgccaggtgcctctgggccccgacggcctgcccctg
cctgagggctcgtccccgctgggcagctacacagactccatcgaccggcgctacctgaag
aatggcgagcgctacatcaccacgccacaagccacctccacgctcacacgctcctacaac
aactacaacgactcctacagcgacgcactcccccccgacgctggtgggagtcagtacggt
gggcgccactacggcctccacgacggctacggcattggagacgcgacggacaactacggc
agcctgtcccgtggagtcaacttccggccaccccgctacccctacgctatggctaacagc
tatcggccagagaacagctacgggaccctacccatccggaaggatgactacggccacgtg
gcccagccccaggtccccatgggcaacagcagtgtggacctaaaccggtcgcagccagaa
cgcttccagccagagccatacggactggaggacgaccgccgcagcctgggccccgaggag
gaggagccctatgacctggagcctgactactccactgctagccggtgccaaggcacgctg
ccaggcaccaaccgcggcagaaccatgagagagccactccgcgacgggccacgcatcagg
ggttacgaggatcccatcgaggcggagatgattgacgagcgacacccctacatccatggc
atgtacccggcccccttggcccagcccgagagggggagcatggccagcctggaccgcctg
gctggccgccgctcgccctccatcgacagcatccgcaaggacccgcgctggcgtgacccc
gatctgcaagaggtcatagccatgctgggccacccaatcgacccggtcaagtctaacgct
gccgcatacctgcagcacctgtgctacgaaaacgacaagatcaagaaagatgtgcgtcag
ctgaaggggatcccggtgctggcaagcctgctggaccatcccaaggctgaggtccaccgc
aaggcctgcggagccctgaggaacatctcctacggcaaggaccacgacaacaaggtggcc
atcaagaactgtgacggtatccctgcccttgtccgcctgctgaggaagaccaacgacatg
gaggtccgcgagctcatcacagggaccctgtggaacctgtcttcctatgagcctctgaag
atggtgattataaaccacggactgcagactttgaccaacgaggtcatcatcccccactca
ggctgggagcatgagcccaacgaggactccaaacctcgtgatgcagagtggaccaccgtc
ttcaagaacacatcaggatgtctgaggaatgtgagttcggacggggctgaggcaaggcgc
agactaagggagtgtgaggggcttgtggatgctctgctgcacgccctgcagtcagctgtg
ggcaagaaagacatggacaacaagtctgtggagaactgtgtgtgtatcatgaggaacctg
tcttatcatgttcacaaagagatcccaggggcagagaagttcacagacccatccgttctg
caggccccaggctctgcgggccctcagaggaagaagaaggatgacgcaggctgctttgga
gggaagaaggccaaagaggaatggtttaatcaagccagaaaaaacggcgagaatgacaaa
aactacgatacgctggatctacccaagcgcacagaacccacaaaaggttttgagctgctg
taccaaccggaagtggtgaggctgtacctgtctctgctaactgagagccagaactacaac
actctggaggctgccgcaggggccctgcagaacctcagcgccggacagtggacctggtcc
aactacatccgtgccacagtgaggaaggagaagggtcttcccatcctggtggagctgctg
cgttctgactctgacaaggtggtccgagccgtggccatcgccctgcgtaacctctccatc
gaccgccgcaacaaagacctgatcgggagctatgccatgagggacctggtgagtaacctg
cccagcggtcagcagcggccagccaagaacctggaggaagacacggtggtggccattctc
aacaccatccacgagattgtgacggacagctccgagaacgcacgctccctcatccaggcc
caggccatcgagaaactggtggccatcaacaagacaagccaatcaccacgtgaggacaag
gccgcctcccacgtgctgcagacggtgtggagctacaaggacctgaggaacgccctgacc
aaggaaggatggaacaagagccacttccagcctacagcgaccggcgcccctaaagcagcc
aagaatggcaagccaggctatgacgacaccactctgcccctgatggagaagaaccaaggt
cagtctgtgatggcaggcgagactggggatcctccgggcctggcctactgtggtgaactg
agcaccaagaaaaatggaagtggtgatatgataccaatggacgagcttggtccagatggc
tactccaccatcgaccagagagacaaagactgcaagtacaagagtagtggagacgggtca
gtggacctgtcagaacgggagccattaaagaatgacacaaataggaaacactatgtcagg
agtaacaggcctgcagtcaaactggtggatgcttgtgacgttaaacctcagcctgttgac
tcctgggtctaa
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