Salvelinus fontinalis (brook trout): 129826611
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Entry
129826611 CDS
T11136
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03022
Basal transcription factors
sfon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129826611 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
129826611 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129826611 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129826611 (gtf2h2)
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129826611 (gtf2h2)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129826611 (gtf2h2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
VWA
Motif
Other DBs
NCBI-GeneID:
129826611
NCBI-ProteinID:
XP_055743497
LinkDB
All DBs
Position
28:complement(33366892..33373768)
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEILKEDESGSLKATVEEILFQAKRKRVFESHGQVRLGMMRH
LYVVIDTSRTMEDQDLKPNRLTSTLKLVEYFVEEYFDQNPISQVGIITTKNKRAEKLTDL
AGNPKKHIDALKKAKDSTCGGEPSLYNSLSLAMQTLKHMPGHSSREVLIIFSSLTTCDPA
NIYELVKTLKALKIRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFRELLMFHVKPPP
ATSSSECSLIRMGFPQHTIASLSDQDAKPSFSQAHLDSTSGGPGLSMGGYFCPQCQAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLEAFQESPLLLHHRERFCEACQGELKDKSVFT
CPSCCSVFCVECDLFIHDTLHCCPSCIHSRSAP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagccagagagagccaagcgttgggaggggggttatgagcgaacatgggag
atcttgaaggaggatgagtctggatctctcaaagccactgtggaggaaatccttttccag
gccaaaaggaaaagggtgttcgagagccatggacaagttcggcttgggatgatgcgtcac
ctgtacgtggtgattgacacctctagaaccatggaagaccaggacctgaaacccaaccgc
ctcacctctacactcaagctggtggaatatttcgtagaggaatactttgatcagaacccc
atcagtcaggtgggcatcatcaccacaaagaacaagagagcggagaagctgactgacctg
gcagggaacccaaagaagcacattgatgccctgaagaaagcaaaggactctacgtgtggg
ggagaaccctctctatataactccctcagcctggccatgcagacactcaaacacatgcca
ggacacagcagcagagaagtcctcatcatctttagtagtctcaccacatgtgacccagct
aacatctacgagctggtcaagactctgaaggctctgaagatccgtgtgtctgtgattggc
ctgtcagccgaggtgcgtgtctgcaccgtgctcaccagagagaccggggggtcgtaccat
gtgatccttgatgagagccacttcagggagctgctgatgtttcatgtgaagcctcctcct
gctacctcctcctccgagtgttccctcattcgcatgggtttcccccagcacaccatagcc
tctctatcagaccaggatgccaagccttctttcagccaggcccatctggacagcactagt
ggtggtcccggtctgtctatgggcgggtacttctgtccacagtgccaggccaagtacact
gagctacctgtcgagtgtaaagtctgtgggctgacacttgtctccgctcctcacctggcc
cgatctttccaccacctcttccccctggaggccttccaggagagtcctctgctgctgcac
cacagagagaggttctgtgaagcctgccagggggagctgaaagacaaaagtgtgttcacg
tgtccgtcgtgctgcagtgtgttctgcgtggagtgtgacctgttcatccacgacacgctg
cactgctgcccctcctgcatccacagccgcagtgccccctga
DBGET
integrated database retrieval system
