Salvelinus fontinalis (brook trout): 129826731
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Entry
129826731 CDS
T11136
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129826731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129826731
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129826731
mRNA degradation factors
5'-3' decay
Lsm complex
129826731
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129826731
NCBI-ProteinID:
XP_055743734
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Position
28:42356671..42359217
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGTKFGDIP
RGIFIVRGENVVLLGEIDIDKLCDNVLQQVSIEEILEEQRLQQQAKQKTEKAKVTALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccagggaccgcgagtctcatcgatgatatagacaaaaagcatcttgta
cttcttcgagatggaagaacgctaattgggtttctgagaagcattgaccagtttgccaac
ctagtttttcatcaaacagttgagcgcatccatgtgggcacgaagtttggagacatcccc
agaggaatcttcattgtgagaggagagaatgttgttttgcttggagaaatagacattgat
aagctgtgtgacaacgtcttgcagcaagtttctatagaggagatcctggaggagcagcga
ttgcaacagcaagccaagcagaagacagagaaagccaaggtgaccgcactgaaggacaga
ggcctatccatcccaaaagcagataatctcgatgaatactga
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