Salvelinus fontinalis (brook trout): 129826808
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Entry
129826808 CDS
T11136
Name
(RefSeq) zinc finger RNA-binding protein-like
KO
K13203
zinc finger RNA-binding protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129826808
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129826808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
129826808
NCBI-ProteinID:
XP_055743869
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All DBs
Position
28:complement(49956513..50005233)
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AA seq
1088 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPGAVAYTHPTTVASYTVH
QAPVAAHSVAAAYAPTAATVAVARPAPVAVAAAATAAAYGGYQPAHATADYGYAQRQPDV
PPPPPPVTSQNYQVGYQDSYSYVRSTAPAVTYDPKQYYQQPVASAAVAVQPQPTAESYYQ
AASLNTSWDATWKKTLPASKTGYSQASLTPYTQTQQTRQVTAIKPAAPFSIYPVSSAVQP
VAAASVVPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASTYYQQQQQQQKQAVAAVAAS
AGWTGSSFTKKPPFQSKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEV
ALKASQNSSSSSSGGSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLG
KPIPSTEPSVVTQTPTSTTAAPSKTPASSSSTLTSNSSYLKSVNIVSQGGAGIGKGPAVN
SLSAATTAVNSLSAATTAVKKVNAPKINFVGGSKLQTTGKVTEEAKVEVSKPPLPSLVPQ
VQESKNESSDSLSASTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAK
EMHLKGRRHRLQYKKKVNPELQVEVKPSIRARKIQEDKMRKQMQKEEYWRRREEEERWRM
EMRRYEEEMYWRRMEGQHHWDERRGGPRMPGDGPYLQGPPGPPGLLGVRPGMPIPQPQGP
VPPRRPDSSDDRYVMTKHTAIYPSEDELQAVQKIVSITERALKLVSDITDQEKTNETTGE
EKEKEVPKTAQDRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKTLLSCIVEHLPK
QLVLVTPEKYEVKGSIEDCSIILTSGADPKMTVTVTLTSPSIREEETPATPPPRDGDVTW
GLVRDPADVLDRQKCLAALAALRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPS
WAMELLVEKAISSASGPLSPGDALRRVLECISSGILLPGGPGLVDPCEKNPTDTLTTMEE
QHREDITSSAQFALRLLAFRQIHKVLGMDPLPQINPRFNVHNNRKRRRDIDGADGFEGEG
KKDKKDFD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtggtctccttcacctatgtgcccagccggctaggtgaagat
gctaaaatggctaccggcaactactttggatttacccacggtgctgctgcgcagtacagt
cagcagccgggcgcggtggcctacacccaccctaccaccgtggccagctacacagtacac
caggcaccggtggcggcccactccgtggcagcagcctacgctcccactgctgccacggtt
gctgtagccaggcccgccccagttgccgtggcagccgcagccaccgccgcagcctacggc
gggtaccagccggcgcacgccaccgcagactacggctacgcgcaacgccagccggatgtc
ccgccgccgcctcccccggtcacctcccagaactaccaggtgggttaccaggactcctac
tcctacgtacggtccacggccccggcggtgacctacgaccctaagcagtactaccagcaa
cccgtagctagcgctgcggtagccgtacagccccaacccaccgccgagtcctactaccag
gccgcctccctcaacacatcctgggacgccacgtggaagaaaacgctaccagcttctaaa
acaggctacagccaggccagtctgaccccctacacccagacccagcagaccaggcaggtg
acggccatcaagcctgccgcgcccttctccatctacccggtctcctccgccgttcagccc
gtagccgccgcctctgtggtcccctcttactcccagagccctacctactccaccaacgcg
gtcacgtactctggcacctcgtattctggctatgaagcagcggtgtactcggctgcctct
acctactaccagcagcagcagcagcagcagaaacaggccgtggcggcagtagcagcttca
gcaggctggacaggaagctccttcaccaagaaacctcccttccagagcaagcagctgaaa
cccaagcagccccccaaaccaccacagatccactactgtgacgtctgcaagatcagctgt
gctggaccccagacctacaaggaacacctggagggtcaaaagcacaagaagaaagaggtg
gccctgaaggcctcccagaacagcagcagcagcagtagtggaggaagctcagcccggggg
actcagaaccagctacgctgtgagctctgtgacgtctcctgcaccggggcagatgcatat
gctgcacacatcagaggggccaagcaccagaaggtggtgaagctgcacaccaagctgggg
aagcccatcccctcgacagaacccagtgtggtgacacagacccctacgtcgaccacggcc
gccccctccaagacccctgcttcctcttcctccaccctcacatctaactcttcctacctg
aaatcggtcaacatcgtcagccagggtggggctgggataggaaagggtccagccgtcaac
agcctatcagcagccaccacagccgtcaacagcctatcagcagccaccacagccgtcaag
aaggtcaacgcccccaagatcaactttgttggaggaagcaagcttcagactactgggaaa
gtgaccgaggaagccaaggtggaggtatccaaacctcctctgccctcattggtcccccag
gttcaggagtccaagaacgagtcctctgattctctgtctgcgtccaccctggctgccctg
cagagtgatgtgcagcctgttggacatgactatgtggaagaggtgcgtaacgatgaaggc
aaggtaatccggttccactgtaagctgtgtgaatgcagcttcaacgatcccaacgccaaa
gagatgcatctgaagggcaggagacaccgcctgcagtacaagaaaaaggtgaacccggag
ctgcaggtggaggtgaagccctctatcagagccaggaagatccaggaagacaagatgagg
aagcagatgcagaaggaggagtactggaggaggagagaggaggaggagagatggaggatg
gagatgagacgctatgaggaggagatgtattggcgtcgtatggaggggcagcaccactgg
gacgagagacgtggggggcccaggatgccaggggacggaccatacctccaggggccccct
ggtccacctggactactgggcgttcggcctggcatgcccatccctcagccacagggacct
gtgcctccccgtcgcccggactcgtcagacgatcgctacgtgatgacgaagcacacggcc
atctacccctctgaggacgagctgcaggccgtccagaagattgtctccatcacagagaga
gccctcaaactggtctccgacatcaccgatcaggagaagactaacgagacgactggggag
gagaaagagaaggaggtcccgaagactgcccaagacagagcgctgaagggggtgatgagg
gtgggggtgctggctaaaggactgctgctccgcggagacaagaacgtcaacctggtcctg
ctctgttcagagaagcccaccaagaccctgctgagctgcatagtggaacacctacccaag
cagctggtgctggtgaccccagagaagtacgaggtgaagggttccatcgaggactgttcc
atcatcctgacgtctggagccgaccccaaaatgacagtcactgtcaccttgacctccccc
agcatccgagaagaggagactcctgccacacccccgccacgggacggagatgtaacctgg
ggcttggtgcgagacccagcggacgtcttggacaggcaaaaatgcctcgctgctctggca
gccctccgccacgctaagtggttccaggctagggccaacggactccaatcctgtgtgatt
gttatccgtatcctgcgtgacctctgtcagagggtcccaacgtggtccgccttccccagc
tgggctatggagctgctggtagagaaggccattagcagtgcctctggccccctgagccca
ggcgacgcactgagacgggtcttggaatgtatttcctccggaatcctgctccccggtggt
ccgggattggtcgacccgtgtgagaagaaccccacggacaccctgacaaccatggaggag
cagcacagagaagacatcacctcgagtgcccagtttgctctgcggctgctggcgttccgt
cagatccacaaggtgctgggaatggacccacttccccagataaaccctcgcttcaacgtc
cacaacaaccgcaagcgtcgccgcgacatcgacggggcggacggcttcgagggcgaaggg
aagaaggacaagaaagatttcgactag
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