Salvelinus fontinalis (brook trout): 129827311
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Entry
129827311 CDS
T11136
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129827311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129827311
03036 Chromosome and associated proteins [BR:
sfon03036
]
129827311
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129827311
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129827311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
129827311
NCBI-ProteinID:
XP_055744013
LinkDB
All DBs
Position
29:complement(847313..910405)
Genome browser
AA seq
1574 aa
AA seq
DB search
MTKEYSKMSKASTECTDQMMEEEVGQPPITDQMREEEEEEVDQHPITDQMMEEEPGSSAE
TERPSSSHTKRKPAVAAKHTGGNKSDASDQSGQEDGDSDNPSDDTTLQERIDCTACGQQV
NHFQRHSVFEHPMLHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDYCHNA
FCKKCVLRNLGRKELSMITDDDSKWSCYICSPQPLSDIASNCSNIMTKLESFWRTGRKKG
REVKGHSKGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVLKELVKGTKKLIEKTTGLN
NTFIHFIQQAEEEQGAGGGGSGTRHLKAFRSVLADLKKAHAALEEDLESQFISPDQGLQN
GDAVSNTDGHDQIDNMVEDGQEAEEDKMADTEDGKELEEDGGLSEDAVMEGSPTPQDHSD
TETDSQAKDQTAVEEEEEDDRDKDIASVGPSVPDELFQMVESLADSAGLTPGNDAMEPTA
ASQSESLAADSNRKSLETHKEKAMPKVKNLIVKLTPVPVVTTRTSTSKSNDKDGGKERSK
DGGKERSKEKSEVEEGGGSEEDSRHSSQKKLAAKRKLKADDSDNSDSDSDEDAKKKKSST
ASAKKTSKKKNSDGSSNSDSDLEKEMKGLSKLGPGKRRSSRVKKEREEKEKKGGDRRRSY
ELKRKARGRGAKQQDSSSDDEEDEEEGGGGSGEESGDQQKMKPIVEETVVAGRGTFRQSS
GDEGNHDASQMADEEDDDPENRIAKKMLAQIKANYSSGAEESSDEDGEEKEQKKGKGGEE
EEEEEDDDDEGGSDVDAKKSVGRRHRLLPHKLTLYEVESGEKEKPASKGKKETKRNRRKV
GSDDSADSDFKESASSSESGVSEEISEKESSSEEESESEKEVSGHRRITRSSEKKKKKKK
KEERSFAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPKGQRKKIRKILKDNKLRME
TRDALKEEEERRRRISEREQLGEKLRETLYVPPDQVLVVEEASAVACPITTKLVLDVDEE
TKEPMVQVHRNLVTKLKPHQVDGDEGNHDASQMADEEDDDPENRITKMLLAQIKANYSSG
AEESSDEDGDGEEKEQKKGKGGEEQEEDDDDDEWGSGSDVDVKTIVGRRHKRTLYEVESG
EEKEKPASKEKETKRTRRKVGSDDSADSDFKESASSSESGVSEEISEMEESLSEESESEK
EGGSHRRTTRSSEKKKKKKKKEERSYAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDT
PKGQRKKIRKIVKDDKLRMETRDALKEEEERRRRISEREQLGEKLRETLYVPPDQVLVVE
EASAVACPITTKLVLDVDEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTSK
NSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKLDFSTALIVCPLNNVLNWLNEFEKWPYG
FKDKESLEVTELATVKRPQERAAALQQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETF
QKTLVDPGPDFVICDEGHILKNEASAISKAMNSIKTRRRVVLTGTPLQNNLIECMSVTSC
YIQTASLQGIGKVF
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagtacagtaaaatgagtaaggcctcaactgaatgtacagaccagatgatg
gaggaggaagtaggtcagcctccgattacagaccagatgagggaggaggaggaggaggaa
gtagatcaacatccgattacagaccagatgatggaggaggaacctgggagctcagcagag
actgagagaccctcctcttctcacaccaagaggaagcctgctgtcgcagccaagcacact
ggagggaataagtctgacgcctcggaccagagtggacaggaagatggggactctgacaac
ccctcagatgataccactctgcaggagagaatagactgcaccgcctgtggacagcaggtt
aaccacttccagcgccactcagtgtttgagcaccccatgctccatgtgctcctctgcaag
tcgtgctataagtattacaccagcgatgacatcaataaagacgaggacggcatggacgaa
cagtgcaggtggtgtgctgaagggggcaacctgatctgctgtgactactgccacaacgcc
ttctgtaagaagtgcgtcctgcgtaacctggggcgcaaggagctgtccatgatcaccgac
gacgacagtaaatggtcctgctatatctgcagccctcagcccctctcagacatcgcctcc
aactgctccaacatcatgaccaagctggagagcttctggcgcacgggacgcaagaaaggg
agggaggtgaaagggcacagtaagggtaaaggtcaccaccaccatggtaaagctgtggtg
aacggtaaggagcattcagacgggtcagggaccctcaccttctcctataagaccctgaag
gtcctcaaggagctggtgaaggggaccaagaagctgattgagaagaccacagggctcaac
aacaccttcatccatttcatccagcaggctgaggaggagcagggagcaggaggaggtggc
agcgggaccagacacctcaaggccttcaggtctgttttggctgatctaaagaaggcccac
gctgccctagaggaggacttggagtcacagttcatttccccggaccaggggctgcagaac
ggggatgctgtctccaacaccgacggccacgaccagattgacaacatggttgaggatgga
caggaggcagaagaggataaaatggccgacactgaagatgggaaggagctagaggaggat
gggggcttgtcagaggacgcagtgatggaggggagccctacgcctcaggaccactcggac
acagagacagacagccaggccaaagaccagacagcagtggaggaggaggaggaggatgac
cgggataaagacattgcgtccgtcgggccgtccgtccctgacgagctcttccaaatggta
gagagtctggcggactccgcagggttaacgcccggcaacgacgccatggaacccacagct
gctagccaatccgagagcctcgccgccgactcaaacaggaagtcacttgaaacccataag
gagaaggccatgcccaaggtgaagaacctgatcgtgaagctgacgcccgttcccgtggtt
accacacgcacctccacgtctaagagcaatgataaggatggagggaaggagaggagtaag
gatggagggaaggagaggagtaaggagaagagtgaggtggaagaaggtgggggctctgaa
gaggacagccgccactccagccagaagaagctggcggccaaacgcaaactgaaagccgac
gattcagacaactcagattccgactcagacgaagacgcgaagaagaagaagtcctccacg
gcttctgccaaaaagacatccaagaagaagaactcggacggctcctctaactccgactct
gacctggagaaggagatgaagggactcagcaaactggggccggggaaacggaggagcagc
cgcgtgaagaaagaaagagaggagaaggagaagaagggcggggatcggagacggtcgtac
gaactgaaacgcaaagccagaggtcgaggagccaagcaacaagattcatcgtctgatgac
gaggaggatgaggaggagggaggaggaggttctggagaggagagtggagaccagcagaag
atgaaacccatcgtggaggagacggtggtagcagggaggggaaccttccgccagtcctca
ggagatgaaggtaaccatgacgcctctcagatggctgatgaggaggacgatgatccagag
aacagaattgccaagaagatgctggcccagatcaaggctaactactcttcaggagcggag
gagagctctgacgaggacggagaagagaaggaacagaagaaggggaagggaggcgaggag
gaggaggaggaagaagacgatgatgacgaagggggctctgacgtggacgcgaagaagagt
gtggggcgtcgccaccggctgctcccccacaaactgacgctgtacgaagtggagtcggga
gagaaggagaaaccagccagcaaggggaagaaggagaccaagaggaacagacggaaagtg
ggtagtgatgactcagcagactcagactttaaggagtcagcgagcagcagtgagtcagga
gttagtgaggagatcagtgagaaggaatcgtcgtcagaggaggagtcggagtctgagaag
gaagtcagtggccacaggaggatcacgcgctcctccgagaagaagaagaagaagaagaag
aaggaggagaggagcttcgcccagaagaagaaacggcgccgcatcaaggtccaggattct
tcatctgacgagaagagcgggtcaggagaggacggctcggggaaggaggatggagacaca
cctaaaggacagaggaagaagatcagaaaaatcctcaaggacaacaagctgaggatggaa
acgagggatgccctgaaggaggaggaggagaggaggagacgcatctctgagagggagcag
ctcggggagaaactccgagagactctatatgtccctcccgaccaggtactcgtggtggag
gaggcgtccgccgtggcttgtccaatcacaaccaagctggtgctggatgtagacgaggag
accaaggagcccatggtgcaggtccaccgcaatctggtcactaaactcaaaccacaccag
gtcgacggagatgaaggtaaccatgacgcctctcagatggctgatgaggaggacgatgat
ccagagaacagaattaccaagatgctgctggcacagatcaaggctaactactcttcagga
gcggaggagagctctgacgaggacggagacggagaagagaaggaacagaagaaggggaag
ggaggcgaggagcaggaggaggacgacgatgatgatgaatggggctctggctctgacgtg
gacgtgaagacgattgtggggcgtcgccacaaacggacgctgtacgaagtggagtcggga
gaggagaaggagaaaccagccagcaaggagaaggagaccaagaggaccagacggaaagtg
ggtagtgatgactcagcagactcagactttaaggagtcagctagcagcagtgagtcagga
gtcagtgaggagatcagtgagatggaggagtcgttgtcagaggagtcggagtctgagaag
gaaggcggtagccacaggaggaccactcgctcctccgagaagaagaagaagaagaagaag
aaggaggagaggagctacgcccagaagaagaaacggcgtcgcatcaaggtccaggattct
tcatctgacgagaagagcgggtcaggagaggacggctcggggaaggaggatggagacaca
cctaaaggacagaggaagaagatcagaaaaatcgtcaaggacgacaagctgaggatggaa
acgagggatgccctgaaggaggaggaggagaggaggagacgcatctctgagagggagcag
ctcggggagaaactccgagagactctatatgtccctcccgaccaggtactcgtggtggag
gaggcgtctgccgtggcttgtccaatcacaaccaagctggtgctggatgtagacgaggag
accaaggagcccatggtgcaggtccaccgcaatctggtcactaaactcaaaccacaccag
gtcgacggggtccagttcatgtgggactgctgttgtgagtcggtgaagaaaaccagcaag
aactctggttctggatgtatcctggctcactgtatgggcctgggaaaaacactgcaggtg
gtaaccctactccacacactactgctgtgtgaaaagttagacttttccacggctctgatc
gtctgtcctctcaacaacgttctcaactggctcaatgagtttgagaagtggccgtacggc
ttcaaggacaaggagagtttagaggtgacggagctggccacggtgaagcgacctcaggag
agagcggctgctctgcagcagtggcaggaggatggggggatcatgatcattggctatgag
atgtaccgtaacctcacacagggtagaaacatcaagagcaagaaactcaaagagaccttc
cagaagaccctggttgacccaggcccagactttgtgatctgtgatgagggccacatcttg
aagaacgaggcgtcggccatctctaaagccatgaactccatcaagacccgacggagagtg
gtgctcaccggcacaccgctgcagaacaacctcatagagtgtatgtccgttacttcctgt
tatatccagaccgctagcctacagggcattgggaaagtattctga
DBGET
integrated database retrieval system
