Salvelinus fontinalis (brook trout): 129827316
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Entry
129827316 CDS
T11136
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129827316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129827316
03036 Chromosome and associated proteins [BR:
sfon03036
]
129827316
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129827316
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129827316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
129827316
NCBI-ProteinID:
XP_055744024
LinkDB
All DBs
Position
29:1073375..1190986
Genome browser
AA seq
2289 aa
AA seq
DB search
MTKEYSKMSKASTESTDQMMEEEVDQHPITDQMEEEEEEVDQHPITDQMMEEEEPGSSAE
TERPSSSHTKRKPAVAAKHTGGNKSDASDQSGQEDGDSDNPSDGMLVVRPPAGTDNKESR
GAMKLRVDLSRRKTDTTLQERIDCTACGQQVNHFQRHSVFEHPMLHVLLCKSCYKYYTSD
DINKDEDGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSMITDDDSKWSCYI
CSPQPLSDIASNCSNIMTKLESFWRTGRKKEREVKGHSKGKGHHHHGKAVVNGKEHSDGS
GTLTFSYKTLKVPKELVKRTKKLIETTTGLNNTFIHFIQQAEEEQGAGGGGSGTRHLKAF
RSVLADLKKAHAALEEDLESQFISPDQGLQNGDAVSNTDGHDQIDNMVEDGQEAEEDKMA
DTEDGKELEEDGGLSEDAEMEGSPTPQDHSDTETDSQAKDQTAVKVEEEEEEEEEEEEDG
EEGDRDKDIASVGPSVPDELFQMVESLADSAGLTPGNDAMEPTAASQSESPAAGSNRKSL
ETHKEKAMPKVKNLIVKLTPVPVVTTRTSRSKSKDKDGGKERSKDGGKERSKDGGKERSK
DGGKERSKDGGKEKSKDGGKEKSKDGGKEKSEDGGKERSEDGGKEESEDGGKEESEDGGK
EESEDGGKKESEDGGKEESKDGGKERSKDGGKEGERIKDGGKERERSKDGGKVRSKDGGK
ERSKDGGKERSKDGGKERSKDGGKEKESGEKERSKDGGKEESEVEEGAGSEEDSRRSSRT
KTTPLRKSPDGKNKMAESSQENSNSEGKSPSRLKSRTKGSSEKEREEEEEEEEEEQSNAS
TKVTADPSKQEVDSDSDEVPDILLQTAAVERSSDEDAQQDADGNEGNRSFKRCQFKLSKK
DGEEEEKNDKVKTEKKLAAKRKLKVDDSDNSESDSDEDAKKKKKSSTASAKKTSKKKNSD
GSSNSDSDLEKEMKGLSKLGPGKQRSSRVKKEREEKEKKGGDRRRSYELKRKARGRGAKQ
QDSSSDDEEDEEEGGGGSGEESGDQQKIKPIVEETVVAGRGTFRQSSGDEGNHDASQMAD
EEDDDPENRIAKKMLLAQIKANYSSGAEESSDEDGDGEEKEQKKGKGGEEEEEEEDDDDD
DDEGGSDVDVKKSVGRRHRLLRHKLTLCEVESGEKEKPASKGKKETKRTRRKVGSDDSAD
SDFKEAASSSESGVSEEISEKESSSEEESESEKEGGSHRRTTRSSKKKKKKKKKEERSYA
QKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPKGQRKKIRKILKDDKLRMETRDALKE
EEERRRRISEREQLREKLRETLYVPPDQVLVVEEASAVACPITTKLVLDVDEETKEPMVQ
VHRNLVTKLKPHQVDGVQFMWDCCCESVKKTSKNSGSGCILAHCMGLGKTLQVVTLLHTL
LLCEKLDFSTALIVCPLNTVLNWLNEFEKWQYGFKDEESLEVTELATVKRPQERAAALQQ
WQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEASAI
SKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFVNPIQNGQAAD
STDQDVRIMKKRAHILYEMLNGCVQRRDYSALTKFLPPKHEYVVSVRVTPIQCTLYRHYL
EHLTGAGNAVEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFI
ASETEESSLSMTSEDEKQKKKKKRGKARKKDSDSDSDALEVIKEWNTSSRGGDPSSRNRA
EPEEEVRPASSPGTRSPDWHKEFVTEADSEILEHSGKMVLLFEILRMAEEVEDKVLVFSQ
SLISLDLIEDFLELAGRAKEEEKPSPYKGEGKWFRNIDYYRLDGSTNALNRKKWAEEFND
YSNVRGRLFLISTRAGSLGINLIGANRVIIFDASWNPSYDIQSIFRLYRFGQLKTCYVYR
FLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDLLDDPTGKKSK
RTTPMLPKDPFLAELLHSNKEQIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGL
SMRVNHGAYGGQMDMGGANSFFPFNVAALASMSNPQLEELINQGRQKVMEATNSLKFLPR
EALEDTIGRVWRENPALTESQVHAMALGRQASVEMELKHREAVYRDVLNKQQTLMMYVQK
VITNRKVREQQIAMANQAQLMSQMNGMLGAGGMSQMELLGLYQQLGALQGHPTHPSMGGK
NPGPSKGNL
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagtacagtaaaatgagtaaggcctcaactgaatctacagaccagatgatg
gaggaggaagtagatcaacatccgattacagaccagatggaggaggaggaggaggaagta
gatcaacatccgattacagaccagatgatggaggaggaggaacctgggagctcagcagag
actgagagaccctcctcttctcacaccaagaggaagcctgctgtcgcagccaagcacact
ggagggaataagtctgacgcctcggaccagagtggacaggaagatggggactctgacaac
ccctcagatggcatgttggtggtacggcctcctgctgggactgacaacaaggagagcaga
ggagccatgaagctccgagtggacctctcaaggagaaagacagataccactctgcaggag
agaatagactgcaccgcctgtggacagcaggttaaccacttccagcgccactcagtgttt
gagcaccccatgctccatgtgctcctctgcaagtcgtgctataagtattacaccagcgat
gacatcaataaagacgaggacggcatggacgaacagtgcaggtggtgtgctgaagggggc
aacctgatctgctgtgactactgccacaacgccttctgtaagaagtgtatcctgcgtaac
ctggggcgcaaggagctgtccatgatcaccgacgacgacagtaaatggtcctgctatatc
tgcagccctcagcccctctcagacatcgcctccaactgctccaacatcatgaccaagctg
gagagcttctggcgtacgggacgcaagaaagagagggaggtgaaagggcacagtaagggt
aaaggtcaccaccaccatggtaaagctgtggtgaacggtaaggagcattcagacgggtca
gggaccctcaccttctcctataagaccctgaaagtccccaaggagcttgtgaagaggacc
aagaagctgattgagacgaccacagggctcaacaacaccttcatccatttcatccagcag
gctgaggaggagcagggagcaggaggaggtggcagcgggaccagacacctcaaggccttc
aggtctgttctggctgatctgaagaaggcccacgctgccctagaggaggacttggagtca
cagttcatttccccggaccaggggctgcagaacggggatgctgtctccaacaccgacggc
cacgaccagattgacaacatggttgaggatggacaggaggcagaagaggataaaatggcc
gacactgaagatgggaaggagctagaggaggatgggggcttgtcagaggacgcagagatg
gaggggagccctacgcctcaggaccactcggacacagagacagacagccaggccaaagac
cagacagcagtgaaagtggaggaggaggaggaagaagaagaagaagaggaggaggatgga
gaggagggtgaccgggataaagacattgcgtccgtcgggccgtccgtccctgacgagctc
ttccaaatggtagagagtctggcggactccgcagggttaacgcccggcaacgacgccatg
gaacccacagctgctagccaatccgagagccccgccgccggctcaaacaggaagtcactt
gaaacccataaggagaaggccatgcccaaggtgaagaacctgatcgtgaagctgacgccc
gttcctgtggttaccacacgcacctccaggtctaagagcaaggataaggatggagggaag
gagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaag
gatggagggaaggagaggagtaaggatggagggaaggagaagagtaaggatggagggaag
gagaagagtaaggatggagggaaggagaagagtgaggatggagggaaggagaggagtgag
gatggagggaaggaggagagtgaggatggagggaaggaggagagtgaggatggagggaag
gaggagagtgaggatggagggaagaaggagagtgaggatggagggaaggaggagagtaaa
gatggagggaaggagaggagtaaggatggagggaaggagggggagaggattaaggatgga
gggaaggagagggagaggagtaaggatggagggaaagtgaggagtaaggatggagggaag
gagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaag
gatggagggaaggagaaggagagtggtgagaaggagaggagtaaggatggagggaaggag
gagagtgaggtggaggaaggtgcgggctctgaggaggacagccgtcgctccagccgcaca
aagaccacacctctcaggaagtcaccggacgggaagaacaagatggccgaatcctctcag
gagaacagcaactcagagggcaagagtcccagcaggctgaagagtagaaccaaaggcagc
tcggagaaggaacgtgaggaggaggaggaggaggaggaggaggagcagagcaatgcctcc
accaaggtgaccgctgacccttctaaacaagaagtggactctgactctgacgaggttccg
gacatcctgctccagactgcagcggtggaacgcagctcggacgaggacgcgcagcaggac
gccgatggtaacgagggcaacaggagcttcaaaaggtgccagttcaaactcagcaagaaa
gacggagaggaggaggagaagaatgacaaggtgaagactgagaagaagctggcggccaaa
cgcaaactgaaagtcgacgattcagacaactcagagtccgactcagacgaagacgcgaag
aagaagaagaagtcctccacggcttctgccaaaaagacatccaagaagaagaactcggac
ggctcctctaactccgactctgacctggagaaggagatgaagggactcagcaaactgggg
ccggggaaacagaggagcagccgtgtgaagaaagaaagagaggagaaggagaagaagggc
ggggatcggaggcggtcgtacgaactgaaacgcaaagccagaggtcgaggagccaagcaa
caagattcatcgtctgatgacgaggaggatgaggaggagggaggaggagggtctggagag
gagagtggagaccagcagaagattaaacccatcgtggaggagacggtggtagcagggagg
ggaaccttccgccagtcctcaggagatgaaggtaaccatgacgcctctcagatggctgat
gaggaggacgatgatccagagaacagaattgccaagaagatgctgctggcccagatcaag
gctaactactcttcaggagcggaggagagctctgacgaggacggagacggagaagagaag
gaacagaagaaggggaagggaggcgaggaggaggaggaggaagaagacgatgatgacgat
gatgacgaagggggctctgacgtggatgtgaagaagagtgtggggcgtcgccaccggctg
ctccgccacaaactgacgctgtgcgaagtggagtcgggagagaaggagaaaccagccagc
aaggggaagaaggagaccaagaggaccagacggaaagtgggtagtgatgactcagcagac
tcagactttaaggaggcagctagcagcagtgagtcaggagttagtgaggagatcagtgag
aaggaatcgtcgtcagaggaggagtcggagtctgagaaggaaggcggtagccacaggagg
accactcgctcctccaagaagaagaagaagaagaagaagaaggaggagaggagctacgcc
cagaagaagaaacggcgtcgcatcaaggtccaggattcttcatctgacgagaagagcggg
tcaggagaggacggctcggggaaggaggatggagacactcctaaaggacagaggaagaag
atcagaaaaatcctcaaggacgacaagctgaggatggaaacgagggatgccctgaaggag
gaggaggagaggaggagacgcatctctgagagggagcagctcagggagaaactcagagag
actctatatgtccctcccgaccaggtactcgtggtggaggaggcgtctgccgtggcttgt
ccaatcacaaccaagctggtgctggatgtagacgaggagaccaaggagcccatggtgcag
gtccaccgcaatctggtcactaaactcaaaccacaccaggtcgacggggtccagttcatg
tgggactgctgttgtgagtcggtgaagaaaaccagcaagaactctggttctggatgtatc
ctggctcactgtatgggcctgggaaaaacactgcaggtggtaaccctactccacacacta
ctgctgtgtgaaaagttagacttttccacggctctgatcgtttgtcctctcaacacggtt
ctcaactggctcaatgagtttgagaagtggcagtacggcttcaaggatgaggagagttta
gaggtgacggagctggccacggtgaagcgacctcaggagagagcagctgctctgcagcag
tggcaggaggatggggggatcatgatcattggctatgagatgtaccgtaacctcacacag
ggtagaaacatcaagagcaagaaactcaaagagaccttccagaagaccctggttgaccca
ggcccagactttgtgatctgtgatgagggccacatcttgaagaacgaggcgtcggccatc
tctaaagccatgaactccatcaagacccgacggagagtggtgctcaccggcacaccgctg
cagaacaacctcatagagtaccactgcatggtgaacttcatcaaggagaacctgctgggg
tcagtgaaggagttcaggaaccgcttcgtcaaccccatccagaacgggcaggcagcagac
tccacggaccaggacgtacggatcatgaagaagagggctcacatcctctatgagatgctc
aatggatgtgtacagagaagagactactctgccctgaccaagttcctgcctcctaaacat
gagtacgttgtgtctgtcagagtcacgcccatccagtgtactctataccgacactacctg
gagcacctaacaggtgcggggaacgcggtggaggggggtcggggtcgagccggcaccaaa
ctcttccaggacttccagatgctcagcagaatctggacccatccctggtgcctgcagctg
gactacatcagcaaggaaaacaaggggtactttgatgaggacagcatggatgagttcatc
gcttcggagaccgaggaatcttctttaagcatgacctctgaagacgagaaacagaaaaag
aagaagaagcgggggaaagccaggaagaaggacagcgactcagacagtgatgctctggag
gtaataaaggaatggaacaccagctcccgcggaggagacccttccagccgtaaccgggcg
gagccagaggaggaagtgcgtccagcctccagccctggcaccaggagtcctgactggcac
aaagagtttgttacggaggccgactctgagatcctggagcattctgggaaaatggtgctg
ctgtttgagatcctccgcatggccgaggaggtggaggacaaagttctggtgttcagtcag
tctctgatctctctggacctgatcgaagatttcctggagctggctggccgagccaaagag
gaggagaaaccctctccctacaaaggtgaagggaagtggttccggaacatagactactac
cgtttggacggctccaccaacgccctgaaccggaagaagtgggccgaggagttcaatgac
tacagcaacgtccgaggtcggttgttcctgatctcgaccagggctggttctctgggcatc
aacctgataggagctaaccgggtcatcatctttgacgcgtcctggaacccgtcgtatgac
atccagagtatcttcaggctctaccgcttcggacagctcaagacctgctacgtctaccga
ttcctggcccagggtactatggaagagaagatctatgaccgccaggtggctaaacagtct
ctgtccttccgagtggtggatcaacagcagatcgagagacatttcaccatgaatgagctg
accgagctctacgcctttgaacctgaccttctggatgatcccactggcaagaagagcaag
aggaccactcctatgctgccaaaggaccccttcctagctgagctgctccacagcaataag
gagcagattgtgggctatcatgaacacgactccctgctggatcacaaggaagaggaggct
ctcagcgaagaggaccgcaaagcagcctgggccgagtacgaggcggagaaaaagggtctg
tctatgcgtgtgaaccatggagcgtacggaggacagatggacatgggaggagctaacagc
ttcttccccttcaacgttgccgcactggcctctatgtccaacccccagctagaggagttg
atcaaccagggccgtcaaaaggtgatggaggccaccaactctctcaagttcctccccaga
gaagctctagaggacaccatcgggagagtgtggagggagaacccagccctaacggagtcc
caggtccacgccatggctctggggagacaggccagtgtagagatggagctcaaacataga
gaagctgtctacagagacgtcctcaataagcaacagactctgatgatgtacgttcagaag
gtgatcaccaacaggaaggtgagagagcagcagatcgccatggccaaccaggcccagctg
atgagccagatgaacggcatgctgggagctggagggatgagccagatggaactcttgggg
ttgtaccaacagctgggggctctacagggtcatcccacccacccctccatgggcggcaag
aaccccggcccctccaagggcaacctgtaa
DBGET
integrated database retrieval system
