Salvelinus fontinalis (brook trout): 129827339
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Entry
129827339 CDS
T11136
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129827339 (rlim)
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129827339 (rlim)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129827339 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129827339
NCBI-ProteinID:
XP_055744070
LinkDB
All DBs
Position
29:complement(4633694..4647790)
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AA seq
731 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQQPSINTSETGEATGELAEGPEDPSNGDTLLDWLNTVRRTGN
TTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGEAQEEAQGEEQQAR
AEGEAQEEEQQARAEGEAQEEAATRAPDNVVEVLPEAGTEVPMETGEVLEEPVVEELAVI
VEPEVEMEPEAEVEAEPELEAEMVPELVVEVVPQPPSPVTTTPPVSRPASPLVQAPPATP
APAPPSPPPEEPPRRGQRRARSRSPEQRRTRARTTRSRSPLTLDRLDGLPRHVPNAAPSH
SPPTLPPQAPAEGSSRTRQHVLSRQSTAEYEVQSAGTGSETAPEPVTTPPQEGEAAGGEG
AAGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRS
ERAGVRTYVSTIRIPIRRISDAGLGEATSMALQTMIRQIMTGFGELSYFMDSDSESSDSN
RGGGNPTGAADLAEALNTPDGGVAGMADGAEPPVSVSGHSMGGAGEARTEEREGEDGIGL
GLAPGIGLGVGGTPREGRARPRAPISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQI
DNLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRA
VLVSANRESVV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaatctgctgggtaccccaggtgagatcaca
gcggaggagttgttgagtcggctgcagcagattaaggatgggccagagcagcagcagcag
cctagcatcaacaccagtgagactggagaagctacaggagaactggcagaaggtccagag
gacccgtctaacggcgacaccctcttggattggctgaacaccgtcaggcggacaggcaac
accacccgcagtggtcaccgaggaaaccagtcgtggcgggcggtgagccggaccaaccca
aacagcggagacttccggttcagtctggagatcaacgttaaccgtaacctggcggagcag
caggcccgcgcggagggggaggcgcaggaggaggcgcagggggaggagcagcaggcccgc
gcggagggggaggcgcaggaggaggagcagcaggcccgcgcggagggggaggcgcaggag
gaggccgcaacaagagcacctgacaatgtggtggaggtcctgcctgaggcggggacggag
gtacccatggagacaggagaggtgctggaggaacccgttgtggaagagctggctgtcata
gtggaaccagaagtggagatggagccagaggctgaagtagaagctgagccagaactagaa
gcagagatggtcccagagttagtagtagaggtagtcccacagccgcccagccctgtcacc
accacccctcctgtctccagaccagccagtcccctggtgcaggcccctccagccaccccg
gcccctgcccctcccagccctccccctgaggagcctccgcgacgtggccagagacgagcc
cgcagccgtagccccgagcagcgccggaccagggctcgcaccacacggagccgttccccc
ctcaccctggaccgactggacggcctcccccgccacgtgcccaacgccgccccttcacac
agcccccccaccctgcccccccaggcccccgcagagggaagctcacggactcgacagcat
gttctgtcccggcagagcaccgcagagtacgaggtccagtcagccggaacagggtctgag
accgccccagagcccgttaccaccccaccccaggagggagaggccgcgggcggggaggga
gcagcgggacgacgtccccccaccatcatgctggacctgcaggtgcgccgagttcgtcca
ggtgagtaccgccagagggacagcattgctaacagaacccgctcacgctcccagaactcc
aacaacaccttcctgtacgagagtgagagggggggattccgcaggaccttctcccggtcc
gagcgcgcgggtgtgaggacgtacgtcagcaccatcaggatccccatcaggaggatcagt
gacgcggggttgggagaggccacctccatggctctgcagaccatgatacgacagatcatg
accggcttcggagagctcagctacttcatggactcggactcggaatcctcggactcaaac
cgtggcggtggtaaccccactggcgctgccgacctggccgaggcgctcaacactcccgac
gggggagtagccggtatggcggacggggcggagcctcctgtctcagtgagcgggcatagt
atgggaggagccggtgaggcaaggacagaggagagggagggggaggacgggattggtctg
ggtctggccccagggataggtttaggggtggggggcacccccagggaggggcgagctcgg
ccccgtgcccccatcagtttggaggaaccggggtcactacccttcctccgccttgctcac
ttcttcctcctgaatgatgaggacgaggaacagcccagaggactcaccaaggagcagatc
gacaacctctccaccaggaactttggggagagtgacgctctgaagacctgcagtgtgtgt
atcacagagtatgctgaggggaacaagttgaggaagttgccctgttctcatgagtaccat
gttcactgtatcgaccgctggctgtctgagaactccacctgtcctatctgccgcagggcc
gtgctggtgtctgctaaccgggagagtgtggtctaa
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