Salvelinus fontinalis (brook trout): 129827373
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Entry
129827373 CDS
T11136
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129827373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129827373
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129827373
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Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
Tim54
CobT
CPSF100_C
BUD22
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
129827373
NCBI-ProteinID:
XP_055744128
LinkDB
All DBs
Position
2:77708581..77714883
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AA seq
576 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKREFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECHKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDALREVMDGLNMGDLLGSLSDD
EGEPEEEEEDDDDEEEEDDDDEEEEDDYEEEDDDVEEEEDSSVNQVSSPPSVPRPPDAAS
FLCFPSPDKLLKLGTKRALLFEQQVDMADAGKTAEAFLKISSVYNEEDEEVKSAVLDSID
AILRKAFASPSFQGYNFVSSLLVMLGLLKSEDKVKPVHVVPGHLQALEYVVRQDYFPQDH
IAVLEAFMSRHVQALESCSSARNILKSTLEHVRPEN
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcacagttggccgactctctggcaaaaacccaggtgactgag
ggagagttgagttataaaggccaaggacgtaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttacaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagggaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aactccctgggtgcagccctgatgacagcaggcgccagactgaccgtgctggacctcagt
gacaacgcctttggaccagatggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggcggcaag
atcttagctgcagcgttgacggagtgccataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggggtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgcagtgtccaggtgataaactttggagactgcctggtgcgttccgagggg
gctatagccatcgcagaggcagtcaccgaggggcttcccatcctcaaggagctgaatctg
tcattcggggagatcacaggagaagctgcactgctggtggcacaatcagtcgagggcaaa
gccacactggagaaactggacctaaatggtaactgcctgggggaggagggctgtgatgct
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggaagaagaagaggatgatgatgatgaagaagaggaggatgatgat
gatgaagaagaggaggatgactatgaggaggaggatgatgatgtggaggaagaagaggac
agcagtgtgaatcaggtttcctcccctccgtcagtgccccgacccccagatgctgcctcc
ttcctctgcttcccctcccccgacaagctgctcaaactgggcaccaagagggccctgctc
tttgaacagcaggtagatatggctgatgctggtaagacagcggaggctttcctgaaaatc
tcctctgtgtacaatgaggaagatgaagaggttaagagtgctgtcctagacagtattgat
gcaattctcaggaaagccttcgcaagcccctccttccaaggttacaactttgtatcatcg
ctgttagtaatgctgggactcctcaagagtgaggacaaggtgaagccggtacatgtggtg
cctggtcatttgcaggcactggagtacgtcgtgcgtcaggactacttcccccaggaccac
atcgctgtgctggaggccttcatgtcccgacacgtccaggccctggagtcgtgcagcagc
gccaggaacatcctcaagtccacgctggagcatgtcaggcctgagaactga
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