Salvelinus fontinalis (brook trout): 129827478
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Entry
129827478 CDS
T11136
Name
(RefSeq) synaptopodin-like
KO
K21112
synaptopodin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129827478
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NCBI-GeneID:
129827478
NCBI-ProteinID:
XP_055744344
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Position
29:15747751..15815528
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AA seq
1147 aa
AA seq
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MERERGQMSVRRGVSWSPGGGREPLHGGHGGNTDTGKRESAASSERLDYKGIKGQVTSTS
TNQLTRKTNLTRSASLSEKELKEARVRSQIIAAQLTVPSGCSNSRGVQLFNRRKQRVNAF
TLESCGERTREEERDGDNRNNNLTWEEEEREGPSEGTETDRQLNWKKNSSGTKPPLWSPP
FGCEVTGSDIMEDPGDEHIYEEVDVIQERHFQPVNEREEEEEERSGEREREEIYEDIEGE
VKDEIIPVNDNNTGPVREEVGMNRGSYTFPTAPSETRNGFHSTQGSAGEIQNGGRVSMSL
SRQTPTIVNRTARPFFSPPTVQLKSPEARSPVMDNNILPAPSYSTPPLPAFTATRPVAFS
PPPPLASCSMPPLPAFPIHPPPPSQSLSSPTPKSTVMFPRSTPAPQYNPPPTSAPVSQYL
PPNPLVTQYIPPPTSPRPNTFVPFTPQPIGQQNQQQPIKTGILEKGAAAIRRSSTARKSM
FTFKEKPVMAPNPELLSLVQGNDDRKKHGLRSVPDPAPEEELLALGAEASNFLAREEVKA
EAAKVPEWSSCLKSSRTREPRGQHQPEQTLTNASGKGAELFAKRQSRMEKYVVGNQNVSG
GGGGQMRSPSPTASLPPSWIYPSNMPGRVKAIANNTDLSARLTQTLQTPQPGNRRPSQQA
LTPAPVLAEPPLEYGCTKIEMDLSRHQPYQLNSSLFIFNPVQGSTSTLLSTLPRGAPPPP
KPLVSSEAYSRQASLPSSNPQSHNYNSLPRFRPTMSPSLQPPSGGIGGRDTYPPQHGGTP
QLRDPRITSAVSAFSTERVASPRSSVQAPRPTFSAKRAGIEPQMRKESPPTPTTTPTRTP
QFTRRFSSPEGPPTSRPLHQATAISPASLPWETRCKSPTVVNQTTKPFSTASLSRPEPST
TTSPISPVSPWGSRCQSPNINQTTKPFSTTISPISPVSPWGSRCQSPNINQTTKPFSTTI
SNSSSSRPSHQGTITSPLSPSPLSPPWGSRCQSPIVSPGPNNSKANHRLLAKNIINAAKR
KNSPSPGALSGHNLPISPLDDNITHQHHQGYDQQHHHSSSKPPFSPYQSRAMGCQSPPFA
SPPPTPTGVIRSPVRLYNTRSLTDSDASVESEDSGLRSPGLQRTHNTSPRGWGGSLRVKR
GSFGTDL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagaggggtcagatgtctgtgaggagaggggtaagctggagcccaggtgga
gggagggagccccttcacggggggcatggcgggaacacggacaccggcaaaagagagagc
gccgcatcttcggagaggctggactacaaagggatcaaaggacaggtgacatcgacctcc
accaatcagctgactcggaaaaccaacctgacgcgtagtgccagcctatcagagaaggag
ttgaaggaggcgagggtgaggtcacagatcatcgcggcccagctgaccgtcccgtctggc
tgctccaattcacgcggcgtccagctcttcaaccgccgcaagcagagggtcaacgccttc
acgctagagagctgcggggaaagaacgagagaagaggagagagacggagataacaggaac
aacaacctgacatgggaggaggaggagagggagggtcctagtgaagggacagagacagac
agacaactgaactggaagaagaacagcagcgggacaaaaccaccactctggtcgccaccc
tttggatgtgaggtcacaggaagtgacatcatggaggacccaggtgacgagcacatctat
gaggaagtggacgtgatacaagagagacacttccagccggtgaacgagagagaagaggag
gaggaagagaggagtggagagagagaaagagaggagatatacgaggatattgagggtgaa
gtgaaggatgagattataccagtaaatgacaacaacaccggtccagtcagagaggaagtg
gggatgaataggggatcatacacattccccacagctccctctgagacccgtaatggcttc
cacagcacccagggctctgctggagagatccaaaatggcgggcgagtttctatgtccctg
tccagacagacccccaccatcgtcaaccggacagccagacccttcttctccccgcccacc
gtacagcttaagtccccagaggccaggagtcctgtcatggataacaacatactcccagcc
ccctcctactccactccccctctccctgctttcactgccactcgccctgtcgccttctcc
cctcctccccctcttgcttcatgctccatgcctcctctcccagccttccccatccatcct
cctcctccctcccagtctctctccagtcctactcccaagtctaccgtcatgttccctagg
tctacacccgccccccagtacaaccctcctcctacgtctgccccagtgtcccaatatcta
ccccccaaccctcttgtcacccaatacatccctcctccaacctcccccagacccaacacc
tttgtccccttcacccctcagcctattggtcaacagaaccagcagcagccaatcaaaacg
ggcattctggagaaaggggcggcggccatcagacgatcgtcaacagccaggaagtccatg
ttcacctttaaggagaagcctgtcatggcacccaaccctgaactcctgtctctggtccag
gggaacgatgataggaagaagcacggcctccgctccgttcccgacccagccccagaggag
gagctgctggctctgggggccgaggcctctaacttcctagccagggaggaggtgaaggcg
gaggctgccaaagtgccggagtggtcctcctgtctcaagagctccaggaccagggaaccc
agggggcagcaccagccagagcagaccctgaccaacgcatcagggaagggggccgagctg
ttcgctaagcgccagtcgaggatggagaagtacgtagtggggaaccagaatgtctccggt
ggtggaggtggtcagatgaggtcaccatctcccaccgcgtctctgccgccgtcttggatc
tatccatctaatatgcctggccgggtcaaagctatcgctaacaacactgatctcagcgcc
aggctgacacagaccctccagacccctcagcctgggaacaggaggcccagccagcaggct
ttaaccccggccccggtcctcgcagaaccacccctggagtacggctgcaccaagatagag
atggacctctccaggcaccagccctaccagctcaactcctccctgtttatcttcaaccca
gtccagggctctaccagcaccctgctgagcactctgccccgaggggcccctccaccaccc
aaacccctggtctcatctgaggcctactccaggcaggcctccctgccctcctccaaccct
cagtcacacaactacaacagcctgccccgcttcaggcctaccatgtccccgtcacttcag
cccccatcaggaggaattggaggtagggatacctatcctccccaacacggggggactcca
cagctgagggaccccaggatcacctctgctgtctctgccttctctacggagagagtagcc
tctcctcggtctagcgtccaggcacccagacccaccttctctgccaagagggccgggatc
gaaccccagatgaggaaggagtcccctccgacccccaccaccacccccaccaggacaccg
cagttcacccgtcggttcagcagcccagagggaccccccacttccaggcccctccaccag
gcgacagccatctcccctgcctccctaccctgggagacgaggtgcaagtcacccacggtg
gtcaaccaaaccaccaaacccttctccactgcctctttatccaggcctgaaccatccact
accacctcacctatatcgcctgtatctccctgggggtcccgctgtcaatcccctaacatc
aaccagacaaccaagcctttctccaccaccatctcacctatatcgcctgtatctccctgg
gggtcccgctgtcaatcccctaacatcaaccagacaaccaagcctttctccaccaccatc
tccaactcttcctcttccagaccctctcaccaaggcaccatcacctctcctctctccccg
tcacccctgtcccctccctggggttccagatgccagtctcccatcgtcagccccggcccc
aacaactccaaggcaaaccatcgcctgttagccaagaacatcatcaacgcggccaaacgt
aaaaacagcccgtccccaggtgctctgagtggccacaacctcccaatctccccactagat
gacaacatcacccaccagcaccaccagggctatgaccagcagcaccaccacagcagctcc
aaaccccccttcagcccctaccagtccagggccatggggtgccagtccccccccttcgcc
agcccacctcctacccctacaggggtgatccggtccccagtaaggctctacaacaccagg
tccctcactgactcggatgcttcggtggaatcggaggactctgggctgaggtctccagga
ctgcagcgtacccacaacaccagtccccggggctggggaggcagcctgagggtgaagagg
ggtagttttggcaccgacctatag
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