Salvelinus fontinalis (brook trout): 129827505
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Entry
129827505 CDS
T11136
Name
(RefSeq) integrator complex subunit 5-like
KO
K13142
integrator complex subunit 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129827505
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
129827505
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
INTS5_C
INTS5_N
Motif
Other DBs
NCBI-GeneID:
129827505
NCBI-ProteinID:
XP_055744386
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All DBs
Position
29:17513663..17517672
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AA seq
1017 aa
AA seq
DB search
MCAVFDGTSLTVTMQTSLTHTPQNAFSPQELSQEIKSFISGVDQTQGRKLSVREHARCAV
RLLRSVPACRGAVLEHLRGVYNEHVSAFLHNLETNGDGDGDSNLEDVITEVHGVLAEFIK
LNPRAWAPLVSTWAVDLLGQLSSKHAGRRAAPNSSSLNELLQLWMSCAATRSLMEAYTQC
LAAMIAWCPDQCVDALLDTSVQHSPHFDWVVAHIGSSFPGTIISRVLACGLKDFCSHGTA
DKCQGDKSSRVPKIGSVVGILGHLAARHSDSIRRELLRMFQESLSPPTIPPSSGSTSLEH
SAQLRRATVPFLLQLAALSPSLLGAVSTELVESLRPPVLLQLQAVLQGLPRDELDNMLGL
AVHLIAQSPAGGAHILRFLADTATPASVIISGPTSSPHEGVREACDLLLQMLLLHLHKLV
YTRSEGDDGYYSRPHSPSSQAPRVVPFLEELQSHVGELCAEMLRLERKRHLWLHQLLCLL
CLLSVYGGPSVATEALCQLLTLARNPDQLALAWQLHTPLSACLPGLIPAAVTRCVAQIHT
HTLGPRQLCQLLLNLGSAMQSVQEEERRGPGGGMGGGGASPQSSMAVQVGAAVSGHLHDF
CPLLLHGDPAVSHAAVRLLSRSPLPRAALPSHLLLVCRAAVTHFFLALRRRGETGKGRDE
GQGGEAVNCSLLLLSRLVGYSPLTLKCVLQHLVEGALHKGNADLFGGQSEDIGGDTPISP
SLAPDRVGSLLDINCRFGTTVNFSGSVWSVFHAGVIGKGLKQRSAMPHPDAASVIQNVQT
LLAVTVQCCSAPSGNGGNGGGTRHQPSVPDEPPPINAEAAKIMAVTLVEYICPDVANGEL
SWPPEEHARTTVERDIHIRRCFEAHPVLFPLLHVVAAGRPALCYCSAVLRGLLATLLAHW
EASREALAMDSPWHLQASCMLVSCMGEGQLLPPVLGNVHEAFPYLTPFEVRLLLLAVWEY
VRGNGPMPQKFVFSAEKGLFCRDFSRDGDVARYVAPIHSVLHKNIDRLGHLCWRFQL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccgtctttgacgggacttccctgacagtcaccatgcagacctctctcactcac
acaccgcagaatgcatttagcccccaggaactgtcccaggagataaaatccttcatcagt
ggcgtggaccagacccagggtcgtaaactcagcgtccgcgagcatgcccgctgtgccgtg
cgtctactacggtctgtgcctgcctgtcgcggggcggtcctcgagcacctaaggggtgtg
tacaacgagcacgtctcagcctttcttcacaatctagagactaacggcgatggcgacggg
gactccaatctggaggatgtcatcacggaggtccatggcgtcctggcggagttcattaag
ctcaacccccgagcctgggctccccttgtctcaacctgggctgtagacctgctggggcag
ctgagctccaagcatgctggccgcagggcagctcccaactcctccagcctcaacgagcta
ctgcagctgtggatgtcctgtgcggctacacgctccctcatggaggcctatacccagtgc
ctggcggccatgatagcctggtgtcctgaccaatgtgtggatgctctcctggacacctcc
gtgcagcactccccccacttcgactgggtggtggcccacattggatcctccttcccgggc
accatcatcagtcgtgtcctggcctgtggccttaaagacttctgctcccacgggacggct
gacaagtgtcagggagacaagagcagccgagtgcctaagatcggctctgtggtagggatc
ctgggccacctggcggcgcggcactctgacagcatccggcgggagctgctgaggatgttc
caggagagcctcagtcccccgactataccccccagctctggatccacctccttggagcac
tcagcccagctccgcagagccacagtgcccttccttctccagctggcggcgctgtctcct
tctcttctgggtgccgtatctacagagctggtggagtctctacggcctccagtcttgctc
cagctccaggctgttctacagggccttcccagggacgagcttgacaacatgctggggctg
gctgtccacctcatcgcccagagccctgctggaggggcacacattctccgcttcctagct
gacacggccacccccgcctctgtcatcatctccggccccacatcttcccctcacgagggg
gtccgggaggcctgcgacctcctcctccagatgctcctgctgcacctccacaagctggtc
tacacccgctcagagggggacgacggctactacagccgcccccactctccctcctcccag
gcgccccgtgtggtccccttcctggaggagctgcagtcccacgtgggagagctctgtgct
gagatgctgagactggagaggaagcgtcatctctggctgcaccagctgctgtgtctgctg
tgtctgctgtctgtatatgggggccctagcgtggccacggaggccctctgtcagctgctc
accctggcccggaacccagaccagctggccctagcctggcagctccacaccccactgtcc
gcctgcctgccgggcctcatccctgccgcagtgacccgctgcgtggcccagatccataca
cacaccctgggacccaggcagctctgccagctccttctcaacctgggctctgccatgcag
agtgtacaggaggaggagaggaggggtccaggaggaggcatgggaggaggaggtgctagt
cctcagtcctccatggcagtgcaggttggagcagcggtctcaggacacctccatgacttc
tgtcctctgctcctccacggtgacccggcggtatcccacgctgccgtgcggctcctgtcc
cgcagccccctcccccgtgctgccctgccttcccacctgttgcttgtttgtcgagctgct
gtcacacacttctttctggcgctgcggaggagaggagagacagggaaggggagagacgaa
ggccagggaggagaggcagtgaactgttcgctgctcctcctgtcccgtctggtaggttac
tcccctctaaccctcaaatgtgtcctgcagcatctggtggagggagctctacataaagga
aacgctgacctgttcggagggcagagtgaggacattggaggggacacgcccatctccccg
tccctggcccctgaccgggtgggctccctgctggacatcaactgcaggttcggcaccacg
gtcaacttctctggcagtgtgtggtctgtgttccatgctggggtgatagggaagggtctg
aagcagcgcagtgctatgcctcaccccgacgccgccagtgtcatacagaatgtccagact
ctgctggctgtcaccgtccagtgctgcagcgcaccatccgggaatggcggcaacggtgga
ggcacccgacaccagccctccgttccagacgaaccgccgcccatcaacgctgaggcagcc
aaaattatggcagtgacgctggtggagtatatctgccccgatgtggccaacggggaactg
tcatggccgccagaggaacatgcacgcacaactgtagaacgtgacatacacatccgccgc
tgcttcgaggcccaccctgtcctcttccctttactccatgttgtggctgccgggcgtcct
gctctctgttactgttctgcggtgctccggggcctgctggccactctgctagcccactgg
gaggcttcgagggaggctttggcgatggactccccgtggcacctccaggcctcctgcatg
ctggtgtcctgtatgggtgaaggccagctgctgccccctgtgctgggcaacgtccacgag
gctttcccctacctgacgccgttcgaagtgaggcttctcctcctggctgtgtgggaatat
gtaaggggtaacggccccatgccacagaagtttgtcttcagtgccgagaagggcctgttc
tgccgggatttctcgcgggacggagacgtggcgagatacgtagcacccattcacagtgtc
ctgcataagaacattgaccggctggggcatctatgctggcgtttccagctctga
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