Salvelinus fontinalis (brook trout): 129827567
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Entry
129827567 CDS
T11136
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129827567 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129827567 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129827567 (pdlim3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
129827567
NCBI-ProteinID:
XP_055744503
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All DBs
Position
29:19684636..19704772
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AA seq
347 aa
AA seq
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MPQNVVLDGPAPWGFRLNGGKDFNQPLTITRVTPGSKASLANLCPGDIILAIEGVSTECM
THSEAQNKIKDPASQLGLKIERPETKLWSPQVTEDGKANPFKLNLEAEQQDLGYFEHKFN
VRPKLFLPAGQSECPPPQGLMGNGHQTVVTLSPPDPPLSANSGTDQPLAPSAQYNSPINL
YSEANVSAAQQLAQITSLEEQVPLSGKTLSSIKESHVYRMLQDDQDRPHEPRQSGSFKAL
QEHVETDGAKPLITRSVRAPVTKPPTPAGSLQKLPLCDKCGNGIVGTVVKAREKFRHPGC
FVCSDCKVNLKQRGYFFVEGQLYCETHARARTIPPEGHDVITVYPTA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaatgtggtcctggatgggccagccccctggggcttcaggctcaatggaggg
aaggacttcaaccagcccctgaccatcaccagggtgacgcctggcagcaaagcctcgctg
gccaacctgtgccccggtgacatcatcctggccatagagggtgtgagtacagagtgcatg
actcacagcgaggcccagaacaagatcaaagaccctgcctcccagctcggcctcaagatt
gagaggcctgagaccaaactgtggtctccccaagtcacagaggatgggaaagcaaaccca
ttcaagctcaatttagaggcagaacagcaagacctgggctactttgaacacaagtttaac
gtcaggcctaagctcttcttacctgcaggccaaagcgagtgccctcctccgcaaggcctg
atgggaaatggccatcagacggtggtcaccctctccccccctgaccctcccctgtctgct
aactccggcacagaccaacccctggcccccagtgctcagtataactcccccattaacctg
tactctgaggccaacgtctcggccgctcaacagctagctcagatcacctcactagaggaa
caggtccctctaagtggtaagacactgtcctccatcaaggagtctcatgtgtaccggatg
ctccaggatgaccaggataggccacatgaaccacgtcagtcaggctcctttaaggctctg
caggaacacgtggagactgatggagcaaagccgttgattactagaagtgtaagagctcca
gtgacaaagcctcctacacctgcgggatcgctacagaaactacccctctgtgacaagtgt
ggaaacggcatagtaggcacagtggtgaaggccagagaaaagttccgccaccctggatgt
tttgtgtgctccgactgcaaagtcaacctgaagcagaggggctacttctttgtggagggg
cagctgtactgcgagacccatgcccgcgcccggacgatacctccagagggacacgatgtc
atcaccgtttaccccacggcttga
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