Salvelinus fontinalis (brook trout): 129827692
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Entry
129827692 CDS
T11136
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129827692
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129827692
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129827692
NCBI-ProteinID:
XP_055744739
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All DBs
Position
29:complement(25543974..25545724)
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AA seq
319 aa
AA seq
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MVFCSTLSTPESEHFKAVRMYNMMETEIKSPLPQSNSGSAAGNKNNSATDQDRVKRPMNA
FMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPD
YKYRPRRKTKTLLKKDKYSLPGGLLAPGANAVNNGVSVGQRMDSYAHMNGWTNSAYSLMQ
DQLAYPQHHSINSPQIQQMHRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSSAMG
LGSMASVCKTEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDSADHASLQTSRLHSVH
PHYQTAGTGVNGTLPLTHI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggtattttgttcaactttatccacgcctgagagtgaacatttcaaagccgttcgaatg
tataacatgatggaaaccgagatcaagagcccactcccacagtccaattcgggctcagcg
gcgggcaacaagaataacagtgccaccgaccaggaccgggtgaagcggcctatgaatgct
ttcatggtgtggtcccgtggacagcggagaaagatggcacaagagaaccctaaaatgcac
aactctgagattagcaagcggctcggtgcagactggaaacttttgaccgacgcggagaag
agacccttcatcgacgaggccaagcgtctgcgcgccatgcacatgaaggagcatccggat
tacaaataccgtccccgcaggaagaccaagaccctgctcaagaaagacaagtattctttg
cctggaggacttctggcgccaggtgccaacgctgtcaacaacggcgtctcggtgggacag
cggatggacagttatgctcacatgaatggctggacaaacagtgcgtactccctcatgcag
gaccagttggcctaccctcagcatcacagcatcaacagcccacagattcagcagatgcac
cggtatgagatggcagggctccagtaccccatgatgtcctcggcgcagacctacatgaac
gcagcatccacgtacagcatgtcccccgcatacacgcagcaaacctccagcgccatgggt
ttgggttccatggcctccgtgtgcaagaccgagccgagctcaccacctccggcgattact
tctcactcccagagagcgtgtttgggggacctgagggatatgatcagcatgtacctgcct
cccggtggcgacagcgcggatcacgcgtccctgcagaccagtcggttacacagtgtacat
ccgcactatcagaccgcggggactggcgtgaacggaacgctacccctaacccacatttga
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