Salvelinus fontinalis (brook trout): 129827735
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Entry
129827735 CDS
T11136
Name
(RefSeq) F-box and WD repeat domain-containing 11-A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04114
Oocyte meiosis
sfon04120
Ubiquitin mediated proteolysis
sfon04218
Cellular senescence
sfon04310
Wnt signaling pathway
sfon04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129827735
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129827735
04340 Hedgehog signaling pathway
129827735
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
129827735
04218 Cellular senescence
129827735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129827735
03036 Chromosome and associated proteins [BR:
sfon03036
]
129827735
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129827735
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129827735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_C
EIF3I
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_Gbeta
Beta-TrCP_D
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
CFAP251_N
ANAPC4_WD40
F-box-like
Beta-prop_Aladin
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
PAC11
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_DCAF4
NBCH_WD40
TRM82_WD
Beta-prop_IFT140_1st
WD40_like
F-box
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
WD40_2
DUF1513
Motif
Other DBs
NCBI-GeneID:
129827735
NCBI-ProteinID:
XP_055744812
LinkDB
All DBs
Position
29:27007006..27021818
Genome browser
AA seq
562 aa
AA seq
DB search
MEPEMEDNTLELMSSVPRSLWLGCSSVAESLCALRCLQSIPSTRAHNQNTSVMESQNHVD
DLSPKKTTILTKFSNGPVMTGSRKRPSEGNCDKEQCIALFDQWSETDQVEFVEHLISHMC
HYQHGHINTYLKPMLQRDFITALPAQGLDHIAENILSFLDAQSLCSAELVCKEWQRVISE
GMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTTEVPPNSYYHSLYPKIIQDIETIE
ANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKILTGHT
GSVLCLQYDERVIVTGSSDSTVRVWDVTSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDR
SIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN
GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA
YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL
NVSTNGQSEGRSPSRTYTYISR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaacacgttggaattaatgagctctgtgcctcgctctctc
tggctgggctgctcctcggtggcagagagtttgtgtgcactcaggtgcctgcagagcatc
ccctctacccgggctcacaaccagaacacgtcagtcatggagtcccagaaccacgtagac
gacctctccccaaagaaaaccacgattctcaccaagtttagtaatggtcctgtaatgaca
ggctctcgtaagcgtccgtcagaggggaactgtgacaaggagcagtgcatcgccctgttt
gaccagtggtctgagactgaccaagtggagtttgtagaacacctcatctcccatatgtgc
cactaccaacacggccacatcaacacctacctcaaacccatgcttcaacgagacttcatc
acagcactgccagcccaggggctggaccacatagcagagaacattctgtcgttcctggac
gcgcagtctttgtgctcggcagagctggtgtgtaaggagtggcagagggtgatctcagag
ggcatgctctggaagaaactcatagaacgcatggtgcgcacagaccccctctggaaaggc
ctgtcagagaggcaccagtgggagaagtatctgttcaagaaccgaacgacagaagtcccg
ccgaactcctactaccactccctctaccccaagatcatccaggacatagagacgattgag
gctaactggcggtgtggcagacacaacctacagaggatccagtgtcggtcagagaacagt
aaaggagtctattgcctccagtacgacgacgataagatcatcagtggccttagagacaac
tccataaagatctgggacaagcagtctctggagtgtctgaagattctgacaggtcataca
ggctctgtgctgtgtctgcagtatgatgagagggtcatagtcactggctcctccgactct
actgtcagggtgtgggacgtgacgtcaggtgaagtactgaacactctgatccatcacaac
gaggcggtgctccacctgcgcttctgtaacggtctgatggtgacgtgttctaaggaccgc
tccatcgccgtgtgggacatggcctcgcccaccgacatcagcctccggcgcgtcctcgtg
gggcaccgagccgccgtcaacgtggtcgacttcgacgacaaatacattgtgtcggcgtct
ggagaccgcaccattaaggtgtggagcaccagtacgtgtgagtttgtgcgcacgctaaac
ggacacaagcgaggcatcgcctgcctgcagtacagagacagactagtggtcagcggctcc
tcagacaacaccatacggttatgggatattgagtgtggagcgtgtttgcgggtgttggag
ggtcatgaggaactggtccgctgcattcgcttcgacaacaagaggatcgtcagtggtgcc
tacgacggtaagataaaggtgtgggatctgcaagctgctctggatccacgagccccagcc
agcaccttgtgcctgcgcacactggtggagcactcgggacgtgtgttccggctgcagttt
gatgagttccagatcatcagcagttcccatgacgacaccatcctcatctgggacttcttg
aatgtgtcgaccaatggccagtcagagggccggtccccctcacgaacctacacctacatc
tccagatag
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integrated database retrieval system
