Salvelinus fontinalis (brook trout): 129827740
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Entry
129827740 CDS
T11136
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129827740
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Protocadherins
129827740
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
129827740
NCBI-ProteinID:
XP_055744825
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All DBs
Position
29:27153593..27162776
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AA seq
1020 aa
AA seq
DB search
MGHRLVSTRWTPLTGLVGCLLVCTCVVELVLAQIRYSIPEELEHGAFVGNIAEDLGLNVA
KLSSRRFRIVSVAKKQYLEVNLENGILFVNEKIDREELCERSPTCFLHLQVVIENPLELY
RVEVEILDVNDNFPNFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRSYQLSSNEH
FVLNTQTRNDGSKFAELVLETPLDREQQKTHEMVLTSVDGGSPERSGTALITITVLDAND
NVPVFDQSVYRTSLVENAQRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKVRELFSVDQ
YTGEIRVKGIVDYEKESVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSRFLDREA
FSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIHGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQA
QDAGFPPLSSNVTVNVFVLDQNDNSPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITALD
ADIGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRFVDKDATRQRLVILVKDNGQPPLS
ATVSILLSVVENVPESLSDFSDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDRDTLSGYSLPPFACYCCGGFQPEPPPEVFKKSNLNLQISTGAKVPTNCMEVNGNGTL
SQAYCYKVCLTPESAKSDFMFLKPCSPSSTSRNNESKAADNFAWSAHNRSASVNNNSGAT
TPNELKQPNTDWTLPKNQKSSLKSYNSINMDGTLMRKAMHADPENYMTPMTGQYWTWGTH
MRDYKMSPPATGPPPRSWTPLCTPPPQQQPQPQPQQPQQPPLPPHPHPHPHSQPPPDYQH
NVYIPGTPSALCTLRPAASHHRSELDVHNSFSTFGKKRRFIHNYEPRTEAAVINNDLYND
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggggcacaggctcgtgagcacccggtggacaccgttaaccgggctggtggggtgcctg
ctggtgtgcacttgtgtggtggaactagttctcgcacagattcggtactctatccccgag
gagttggagcacggagcttttgtcggtaatatcgccgaggacctgggcttgaatgtagcc
aagctgtcctctcgtcggtttcgtattgtatccgtggccaaaaaacaatacttagaagtg
aatctggaaaacggtattttgttcgttaatgagaagattgaccgcgaggaactgtgtgaa
cggagtccgacctgcttcttgcacttgcaagtggtgatcgagaatccgttagaactgtac
cgagtggaggtggagattttggatgtgaatgacaattttcccaatttcccatggagcgag
tttaatctggagattacagagtcagcggcgcccgggtctcggttcccgttggaaagtgcg
caggaccaggacgtgggcaccaactcgctccgctcctaccagctgagctctaacgaacac
tttgtgctgaacacccagacgcgtaatgatgggagcaagtttgccgagctagttctggag
accccactggaccgggagcagcagaagacgcatgagatggtgctcacatccgtggacggg
gggtcgcctgagcgctcgggcacagcgctcatcaccatcacggtgttggatgccaacgac
aacgtgcccgttttcgatcagtctgtttaccggacgagcctggtagaaaacgcacagaga
gggacattagtgctgaagctaaatgctactgatttggacgagggtgcgaacggggaggtg
tcctatgcattcagcgggcacgcaccactcaaagtgcgcgagctgttcagcgtagaccag
tacacaggtgagatccgagtgaaggggattgtggactatgagaaagagagtgtgtatgag
ctgtacgtgcaggctaaagacaggggtccctcggcagtggccgtgcacagtaaggtgttg
gtggatatcttagatgtgaatgacaacgcgccagaagtcatcctcacctccgtgtccacg
cctgtccaggaggacgcgccaccgggaacggtgatagccgttataagcgtcatggaccgg
gactcgggagagaacgggaatgtggactgccagatccccagcaacgtccccttccagctc
cactcctcttttaagaactactacactctggtgactagcaggtttctcgacagagaagcc
ttctccgagtacaacattaccctcacggcccgggacttgggctccccgtccctctccacg
aggaaaaccatcctcgtccaagtgtctgacattaacgacaaccccccgcgctttgcccag
ccatcatacacagtttatgtgactgagaataatgccccgggcgcatccatttgctcagtc
actgctttcgaccccgattctaatcagaacgcctatctgtcctactcgattctagagggt
cagatccatggcatgcccgtgtccacttacgtctccatcaactcggacaacggaaacatc
tacgcgctgcgctcctttgattacgagcagctaaggaactttcagatacgggtgcaggcg
caggacgccggtttccccccactcagcagcaatgtcacagtaaatgtgttcgtattggac
cagaacgacaactctccagtcatcgtgtcccccttgcccaagaacgggactgtagcgaca
gaggtggttccgaggtcagtggatgcggggtacctagtcaccaagatcactgcgctagat
gcggacataggacagaactcccgcctctcctaccaggtgctccaggctacagacccgggg
ctgtttagtgtcgcgctctacacaggagaaattaggacaattcgccggttcgtggataag
gacgctacgaggcagagactcgtcatcctggtcaaggacaacggccagccgcctctctcc
gccaccgtctccatcctcctctccgtggtcgagaacgtgcccgagtccctgtctgatttc
agcgacctcactctgagcccgcagcccccctccaacctcgctctctacttgatcgtgtca
ctgagcaccatctcgctaatcttcctggtggctattattgtgctggctgcggtcaaatgt
tacaaggacagagacaccctcagtgggtacagcctccctcccttcgcctgctactgctgc
gggggcttccagccagagccaccccccgaggtattcaaaaaatctaacctgaacctgcaa
atctccaccggggctaaagtgcctaccaactgcatggaggtaaatggcaacggtactctg
tcccaagcctactgctataaagtgtgtctgacccccgagtcagctaagagtgactttatg
ttcctgaagccgtgcagccccagcagtacctcgaggaacaacgagtcgaaggcggctgac
aactttgcctggagcgcgcacaaccggagcgcatccgtgaataacaattccggagccacc
actccgaatgagctcaagcaaccaaacacagactggaccctcccaaagaaccagaagtcc
tctctgaaaagctataactctatcaacatggacggcactctgatgaggaaggccatgcat
gcagacccagagaactacatgacacccatgacgggccagtactggacctggggcacccac
atgagggactacaagatgtctcctcctgccactgggcctcctcctcgctcctggacccct
ctgtgcacccctccaccccagcaacagccccaaccccaaccccagcagcctcagcaacct
ccactcccccctcacccccatcctcaccctcactctcaaccacctccagactaccaacac
aacgtgtacatccctggcacgccgtcggccctgtgcaccctgaggccagcagccagccac
caccgcagcgagctggatgtccacaactccttctccaccttcggcaagaagagacgcttc
atccacaactacgagccccggacagaagcagctgtcatcaacaacgacctgtataacgat
taa
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