Salvelinus fontinalis (brook trout): 129827851 Help Entry 129827851         CDS       T11136                                  Name (RefSeq) protocadherin-18-like isoform X1   KO K16499   protocadherin delta 2 Organism sfon  Salvelinus fontinalis (brook trout) Brite KEGG Orthology (KO) [BR:sfon00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sfon04515]     129827851 Cell adhesion molecules [BR:sfon04515]  Cadherins   Protocadherins    129827851 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 PAG Cadherin_C_2 TMEM154 Motif Other DBs NCBI-GeneID:  129827851 NCBI-ProteinID:  XP_055745061 LinkDB All DBs Position 29:32591978..32598688 Genome browser AA seq 1242 aa AA seqDB search MGAKMNTPRVNIVFSTALLLFLVGIMQDVSGKNLKYKVYEEQKVGTVIARLKEDVAGVLS KLPSSVSFLFRAMQRGSTPFLSVREEDGEITIGTKIDREKICEKNLNCSIEFDVITLPTE YLQLFHVEVEVLDINDNSPQFSRAIIPIEISESASVGNRIQLDSATDPDVGDNSLYSYSL TPNHFFKIDIRTRTDGAKYAELVVLRELDREVQSNYQLQLTASDNGVPPKSGSTLLKISI SDSNDNSPAFDEQAYVINLMENSPLGTLLIDLNATDPDEGTNGKIVYSFSSHVSPKILET FKINPENGQITLIKKVDYESTSSYELDIQAQDLGPNSIPGLCKIVIKVVDVNDNKPEINI NLMTPGKEEVAYISEGAPVDTFIALVRVDDSDTGLNGDVVCRLHGHGHFRLQKTYEKNYM ILTNVSLDREKRSEYSLTVIAEDRGSPSLSTVKHFTVQVLDENDNPPRFEKSRYEVFKSE NNSPGAYLMTVVASDPDLGTNGQVTYTVVEALVQGSPISTYVTIDPSNGAIYALRSFDHE DVSRIAFTVQARDGGNPALSSNATVLLTVLDDNDNPPTIQSPPLRNHTADLPLWRHASAG QLVTIIKATDRDTGANGELSCSIVGGNEEGLFVMDARRCELRTNGSLEGVPKDVLEIRVE VQDRGTTRLSTGALLRLSLQENMDILPPDLPTGPSQPPLDLSLIIIISLGAVCALLLVVM VMFTTARCNREKKDPRNSYNCRVAENTYQNHPKKPSRQIHKGDITLVPTVNGTLPVRAHP RSPSASPAPERGTMGSRQSQHSRQSLNSLVTISSNHVAENFALELAHATPPVEQVSQLLS MLHQGQYQPRPSFRGNKYTRSYRYALNDMDKFSLKDSGRGDSDAGDSDYEAGRESPIDRL LGEAFTELYPPDGQHRPHPQHPHAAMRLCTEECRVLGHSDQCWMPPLPSPASSDYRSNLF IPGDDPRQARDPEQPPQSSDPAHPHAQRSNQSFSTFGKDNQEGAEEGEAEDGGEEGEDLC GTTSLLSEMSSVFQRLLPPSLDSYIQVSETQKGGTSVGGVSVPMTGSLDRRRGHLPGKPS AAAHQQGVAAWAANTHFQNPGSSIGPSGHPHPQNGSYHTLKPSTKLSPQNNHKNQVVGHG QHAPTPKNSPLLTALVSPTLVVPSLAPAPAPIPVPVPLPGPCGKWLPAMEEIPENFEEDE FDSVLGQLGHLQGKRSDSRHELMDASELVAEINKLLQDVRQS NT seq 3729 nt NT seq  +upstreamnt  +downstreamnt atgggtgccaaaatgaatacacccagagtgaatatagtattttccactgcactattatta tttttggttggaattatgcaggacgtttctggtaagaatttgaaatataaagtttatgaa gagcaaaaagtgggcacagtgattgcaaggctaaaggaagacgtggcgggtgttctttct aaattaccgagttcagtgtcctttctgttccgtgctatgcagcgggggagcactccgttt ctgtcggttcgggaggaggacggtgaaatcaccatagggaccaagattgaccgggagaag atttgtgaaaagaacctcaactgttccatcgaatttgacgttatcactctgcctactgaa tacctccagctcttccacgtcgaggtggaagtcttggacattaacgataactcgccacag ttctctcgtgccatcatacccattgagatctccgagagcgcatctgtgggaaaccggatc cagctggacagcgccacggacccagacgtgggagataactccctttactcttattccctg acaccgaatcactttttcaaaatcgacattaggaccagaaccgacggtgccaaatacgca gagcttgttgtgttgagagagctggacagggaggtgcagtccaactaccagctgcagcta acggcctcggacaatggagtccccccgaagtccggctccactttgctcaagataagcatc tcggactccaatgacaacagtccggcttttgacgagcaggcttacgttattaatctcatg gaaaactcaccactagggactctactgattgatttaaacgccacagatccggatgagggc acaaacggtaaaatagtttactctttcagcagtcatgtctctcccaaaatactggagacg tttaaaattaaccctgaaaatggtcaaatcactttgattaaaaaagtggactatgaatct acgtcatcttatgagctggacattcaggcacaggatctgggtcccaactccatccctgga ctttgtaaaatcgtcatcaaagtggtggacgtgaacgacaacaaaccggagatcaacatt aacctgatgactcctggcaaggaggaggtggcctacatctcggagggcgcgccagtggac accttcatagcactggtgcgcgtggacgacagtgacacggggctcaacggtgacgtggtg tgccgcctgcacggccacggtcacttccggctgcagaagacctatgagaagaattacatg atcctgaccaacgtgtctttggacagagagaagaggtcagagtacagtctgacagtcata gctgaggaccgcggctctccaagcctctccacagtcaaacacttcactgtacaggtgttg gatgaaaacgataacccgcctcgctttgagaagagtcgctacgaggtcttcaagtcagag aacaactctccaggggcctacctgatgacagtggtagcgtccgaccctgacctgggcact aacggtcaggtgacctacacggtggtggaagctctggtccagggaagccccatctccacc tacgtcaccatcgacccgtccaacggcgccatctacgctctacggagcttcgaccacgag gacgttagccgcatcgccttcaccgtccaggcacgcgacggagggaaccccgccctctcc tccaacgccaccgtcctcctgactgtgctcgacgataacgacaatccgcccaccatccag tccccacccctacggaaccacaccgccgatctacctctctggagacacgcctccgccggt cagctggtcaccatcattaaggccaccgaccgtgacaccggtgccaacggcgagctgagc tgctccatcgtcgggggcaacgaggagggcctgtttgtgatggacgcgcggcgatgcgag ctgcggaccaatggcagtctggaaggggttcccaaggacgtgctggagatcagggtggag gtgcaggacaggggcaccactcgcctgtccacgggggccctgctccgcctttcccttcag gagaacatggacatcctgcccccagacctccccacgggcccaagccagccaccgctggac ctctccctcataatcatcatctccctgggggccgtgtgtgccctgctgctggtggtcatg gtgatgttcaccacggcacgctgcaacagggagaagaaggacccacgcaactcgtacaac tgcagggtggcagagaacacgtaccaaaaccacccgaagaagccctctaggcagatccat aagggagacatcaccctagttcccaccgtcaacggcaccctgcccgttcgggcacaccca cgctcaccttctgcttcgcctgccccggagaggggcaccatgggcagccggcagagccaa cacagccgccagtcgcttaacagcctagtcaccatctcctccaatcacgtcgcagagaac tttgctctggaactggcccatgccacgccccctgtcgagcaagtctcacagcttctgtcc atgctccatcagggccagtaccagccaagacccagtttccgtggcaacaaatacaccagg agctacaggtatgctctaaatgacatggataagtttagtctgaaggacagtggtcgtggt gacagcgacgctggggacagtgactacgaggcagggagagagtctcccatcgacaggctc ctgggtgaggcctttactgagctatacccccctgacggccaacacagaccccatccacag catccgcatgcagcgatgagactgtgcactgaggagtgtcgtgtcctgggtcattctgac cagtgctggatgcctcccctgccctccccagcctcctctgactaccgcagcaacctcttc atcccaggagatgacccccgccaggccagagaccccgagcagcccccacagtcctccgac cccgcccatcctcatgcccaacgcagcaaccagagcttctccacctttggcaaggacaac caggagggggccgaggagggagaggcggaagatgggggagaggagggggaggacctctgt ggaaccacctccctgctgtcagagatgagcagcgtgttccagaggctcctccccccatcg ctggactcctacatccaggtcagtgagacccagaagggaggtacgagtgtggggggtgta agtgtcccaatgacggggtcactggacaggaggaggggtcacttgccaggtaagcccagt gctgcagcccaccagcaaggtgtggcagcgtgggctgccaacacccacttccaaaacccc ggatctagcatcgggccctcaggccatccacacccccagaacggtagctaccacaccctc aaacccagcaccaagctcagcccccagaacaaccacaagaaccaggtcgttgggcacgga cagcacgcccccacccccaagaacagccctctcctcactgccctggttagccctaccctg gtggtaccctccctggcccctgcccctgcccccatccctgtccctgtccccctcccgggg ccttgcggtaagtggctcccagccatggaggagatcccagagaacttcgaggaggatgag tttgactcggtgctggggcagctgggacacctgcaggggaagaggagcgacagccggcat gagttgatggatgccagcgagctagtggctgagatcaacaaactgttacaggacgtccgg cagagctag

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