Salvelinus fontinalis (brook trout): 129827904
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Entry
129827904 CDS
T11136
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon02010
ABC transporters
sfon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129827904
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129827904
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129827904
Transporters [BR:
sfon02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129827904
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129827904
NCBI-ProteinID:
XP_055745157
LinkDB
All DBs
Position
29:complement(34780402..34825702)
Genome browser
AA seq
2299 aa
AA seq
DB search
MSITTQLGLLLWKNFTYRRRQTIQLLIEIVWPLLIFFILISVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRNPTPGESPGVVGNFNESIISRLFSDAKKILLYSQNDR
NLDGFKDLIQALKTLQANTEGFKLKDFLHDNETLSTFLLRNASFSEHAVHQIIEANVNLE
KVLVKGFGVHLRDMCKSNGTSVEDFVTIADSEVSSLVQEILCRSPGSWLNQAESHFLNNL
DFLKPIRKDVRADPEAVQQVAEATDNLLESLGSLAIELASMKSWSDLRNEIIFLTENATS
SPSHMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNHNTTDGEEPISAYDNASTP
YCNAMMRNMESSPVSRMIWQALKPLLMGKILYTPATPATQKIIHEVNKTFQELGVLRELG
GMWEEVRPKAWTFMESSEQMDLVRTLLKNNGTARFFTSQLAGTEWTVEDVSNFLTKHSED
TRPHGTAFTWREVFNETDQAIMSISRFMECVNLDKMEPVANEERMVNKSMALLDDRKFWA
GIVFPDIEANSSELPAIVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDIIEHSIITVVTGAKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAI
IIKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISASLLVVLLKMGNLLPYSD
PGVIFLFLGSFAVVTIMQCFLISTMFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKIVASLLSPVAFGFGCEYFALFEEQGIGIQWSNLFNSPMEEDNFSLTTAIIMMYFDSFL
YMVMTWYIESVFPGQYGIPRPWYFLFTKSYWFGEGDNRKTDFSQNKRRNCEAVCIEEEPA
HLKPGVFIENLVKVYPHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPT
SGTAYIMGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKSEIE
QILIDIGLPHKRTSKTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDL
LLHYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKG
PEPSLSSFHNSSSTVSFTKKEEDCPSESSSDAGLGSEHESEAATIETAQAASICESAFVP
PDVSLISSLIFKHVPAARMVEDLGHELTYILPYGAAKDGAFVELFKDMDDRLPDLGISSY
GVSDTTLEEIFLKVAEDNGVDTELPSDGTLPMPRRRIHHAFGGGNAFGGDHQSCLRPQTD
DDNNDHNDSDAYPESRETDFLNGSDGKGSYQVKGWSLTRQQFVALIWKRFLYAQRSRKGF
FAQIVLPAVFVCVALVFSLIVPPFGKYPSLELQPWMYEEQSLFISDDAPEDANTQRLLSA
LTEGPGFGTRCMEGQPITDSHCTMGDEDWTIPEVPESLLELFRTGNWTMEEPSPTCACSC
DGRKKMLPECPTGAGGLPPPQMKISETDTLQNLTGRNISDYLVKTYAEIIGKSLNNKIFV
NEFRYGGFSLGARSTQVLPLAGEVDDAIARVRKIFELEKGAAADRFLASLSSFINGLDTK
NNVKIWFNNKGWHSMGAFLNVMNNGILRANLPPGQDPSKFGIRAFNHPLNLTKEQLSQVA
LMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWTANFIWDM
CNYIVPATLVIIIFACFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAY
VVLTSVNILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQA
MADALERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFCIKPINLHTKLPP
VGEEDEDVARERQRIVNGLGHGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGV
NGAGKTTTFKMLTGDSIVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHL
EFYAVLRGVPEKEVCEVAEWGIRKLGLVKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVF
LDEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGS
VQHLKNRFGDGYTIILRVAGPDPDLPPVMKFIESKLPGSTLKEKHRNMLQYQLSSSLTSL
AHIFSILAKNKDLLRIEDYSVSQTTLDQVFVNFAKDQSDDYHSKDNSVKRKEAVVDITPL
SSRQAEEKLAEERLKESLV
NT seq
6900 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcacaactcagctgggcttgctgttgtggaagaactttacctacagaagaagg
caaacgatccaactgctgattgagatagtatggcccctgttgatcttcttcattttgata
tcagtgagactgaactaccctccgtacgaacaacatgagtgtcatttccccaacaaggcc
atgccctcggcaggcaccctgccgtggatccaaggcatcatctgcaacgccaacaacccc
tgcttccgcaaccccactcctggagagtcccctggggtcgtgggcaacttcaatgagtcc
ataatctctcgtttgttctcggatgccaagaaaatcctgctgtacagtcagaatgaccgg
aatctggacggctttaaagaccttatccaggccctgaagaccctacaggccaacaccgaa
ggattcaagctgaaggatttcctccacgacaatgagaccctgtccactttccttctgcga
aacgcctccttctcggaacacgccgtgcaccagatcattgaggccaacgtgaacttggaa
aaggtgctggtcaaaggcttcggtgttcacctgagggacatgtgcaaaagcaacggcacc
agtgtggaggactttgtgaccatcgcagacagcgaggtgtccagtctggtccaggagatc
ctctgccggtccccaggctcctggctcaaccaagcagaaagccacttcctcaacaacctg
gacttcctcaaaccaatacggaaagatgtgagggctgaccctgaagctgtccagcaagtg
gctgaggctacagacaaccttctggagagcctggggtccctggccattgagctggccagc
atgaagagttggagcgacctgcgtaacgagatcatcttcctcactgagaacgccacgtcc
tcccccagccacatgtaccaggccgtgtcgcgcatcgtctgtggccaccccgagggcggc
ggactaaagatcaagtccctcaactggtacgaggacagcaactacaaggccctgttcggc
aaccacaacacaaccgacggggaggaacctatctctgcctacgacaacgcatccactcca
tactgcaatgcaatgatgaggaacatggagtccagccccgtatccaggatgatctggcag
gccctgaagcctctgctcatgggcaagatcctgtatacccctgccactcccgccacacag
aagatcatccacgaggtgaacaaaacgttccaggagctgggggtcctcagagagctgggg
ggtatgtgggaggaggtgaggcccaaggcctggaccttcatggagagtagcgaacagatg
gacctagtaaggaccctactgaagaacaatggcaccgccaggttcttcacctcccaactg
gcgggcacagagtggaccgtggaggatgtctccaacttcctgaccaaacattcagaggac
acacgtccccacggcaccgccttcacctggagggaggtcttcaacgagacggaccaggcc
atcatgagcatatcccgcttcatggagtgtgtaaacctggataagatggagcccgtggcc
aacgaggaaaggatggtcaacaaatccatggcactcctggacgacaggaagttctgggcg
gggatcgtgtttcccgacattgaggccaacagctctgaactgccggccattgtcaactac
aagatccgcatggacattgataatgtggagcgcaccaacaagatcaaagacggatattgg
gaccccggtcctcgtgccgacccctttgaggacctgcgctacatctggggcggcttctct
tacctccaggacatcatcgaacacagcatcatcacggtagtgactggcgccaaggagaag
acgggagtctacatccaacagatgccctacccctgctacgtggacgacatcttcctgcgg
gtgatgagtcgctccatgcccctcttcatgaccctggcctggatgtactctgtggccatc
atcatcaagagtgtggtttacgagaaggaggcgaggctcaaggagaccatgaggatcatg
ggattggacaacggcatcctgtggttcagctggttcatcagcagcctcatccccctgctc
atctccgccagtctgctggtggtgctgctcaagatggggaacctgctgccctacagtgac
cccggtgtcatcttcctgttcctgggttccttcgccgtggtaaccatcatgcagtgcttc
ctcatcagcaccatgtttgcccgtgccaacctggcggcggcctgtgggggtatcatctat
ttcaccctctacctgccctacgtcctctgtgtggcctggcaggactacgtgggctttggg
gcaaaaatagtcgctagcctgctgtccccggtggcctttggctttggctgtgagtacttt
gccctgtttgaagagcagggcatcggcatccaatggagcaacctgttcaacagccccatg
gaggaggacaacttcagcctgaccaccgccatcatcatgatgtactttgactccttcctc
tacatggtgatgacctggtacatcgagtccgtcttccccggtcaatatggtattcccagg
ccctggtacttcctcttcaccaagtcctactggtttggagaaggagacaacaggaagact
gacttcagtcagaacaagagaaggaactgtgaagctgtctgtatagaggaagagccagcc
caccttaaacctggcgtcttcatagagaacctagtcaaggtgtacccgcacgggaagaag
ctggctgtggacgggctgactctgggcttctacgagggacagatcacttctttcttgggc
cacaacggagcagggaaaaccaccaccatgtcgattctaacgggactgtttccccctacc
tctggcactgcttacatcatgggcaaagacatccgatcggagctgagcgctattcgacag
agtctgggtgtttgtccacagcacaacgttctcttcagcatgctgactgtcgaggagcac
atctggttttacgctcgtctgaagggtctatctgaggaacaggtgaagtctgagatcgaa
cagatcctgatagacattggcctgccgcacaaacgcacttccaagaccagcacactgtct
ggagggatgcagaggaagctctctgtggctctggccttcgtcggggggtcaaaggttgtg
attctggacgagcccaccgctggggtcgacccctacgcccgccggggcatctgggacctc
ctgctccattatcgtcaaggtcgtaccatcatcctctccacccaccacatggatgaggcg
gacatattgggcgaccgcatcgccataatctcccatggcaagctttgctgcgtgggctcc
tccctcttcctgaagaaccagctaggtacaggctactatctgaccctggtcaagaagggc
ccagaaccttccctcagctccttccacaattcctccagcaccgtctccttcactaagaag
gaggaagattgcccctctgagagcagctctgacgcaggccttggcagcgaacacgagagc
gaagcggccaccatcgaaactgcccaggctgcatccatctgtgaaagtgccttcgtgccc
cccgacgtctccctgatctccagcctgatcttcaagcatgttccagccgcccgtatggtg
gaagacctgggccacgagctcacttacatactgccctatggcgcagccaaggacggcgcc
ttcgtggagctcttcaaggacatggacgaccgtctccccgacctaggcatctccagctac
ggcgtctccgacaccaccctggaagagattttcctgaaagtggcagaggacaatggagta
gacactgaactcccctctgacggtaccctccccatgcccagacgtcgcatacatcatgct
tttggtggaggaaatgcctttggtggagaccaccagagctgccttagaccccagacagac
gacgacaacaatgaccataacgactcggacgcatacccagaatccagagagacagacttc
ctgaacggctcggacggtaaaggctcctaccaggtgaaaggctggagtctgacgaggcag
cagtttgttgccttgatatggaagaggttcctgtatgctcaacgctccagaaaaggtttc
tttgctcagattgtgctccctgcggtgttcgtttgcgtcgccctggtcttcagtttaatc
gtcccgccctttggaaaataccccagtctggagctgcagccgtggatgtacgaagaacag
tccctcttcatcagtgatgacgcccctgaagatgccaacacacagcggttattaagtgcc
ctcaccgaaggccctgggtttggaacgcgttgcatggaaggacagcctataactgactct
cactgtacgatgggtgatgaggactggaccataccggaggttccggagagccttctggaa
ctgttccgcacaggcaactggaccatggaggagccgtctcccacatgtgcctgcagctgt
gacggccgcaaaaaaatgctccctgagtgtcctactggagccggaggactgccaccaccc
cagatgaagatcagcgagacagacaccctgcaaaacctgactgggagaaacatctctgac
tacctggtaaagacctatgcagagatcattgggaaaagtttgaacaacaagatctttgtg
aatgaatttaggtacggtggcttctcattgggcgccaggagcactcaggtcctcccccta
gctggcgaggttgatgacgctatcgctcgagtgaggaagatttttgaattggagaagggt
gctgccgcggaccgattcctggcgagcttgtctagcttcatcaatggtctggacaccaag
aacaatgtcaagatttggttcaacaacaaggggtggcacagcatgggagcctttctcaac
gtgatgaacaatggcatcctgcgcgccaacctgccccctggccaggaccccagcaagttt
ggcatccgcgccttcaaccacccgctcaacctcaccaaggagcagctgtcccaggtggca
ctgatgaccacctcagtggacgtgctggtgtccatctgcgtgatcttcgccatgtccttc
gtcccagccagcttcgtagtcttcctcatccaggagagagtgagcaaggccaagcacatg
cagttcatcagcggcgtgcagcccctgctctactggacggccaacttcatctgggatatg
tgtaactacatcgtcccggcgacgctcgtcatcatcatctttgcctgcttccaacaaaaa
gcctacgtgtcgtccaccaacctgccagtgctggccctgctgctgctcctctatggctgg
tctatcactcctctgatgtacccggcgtccttcttctttaagatccccagcacggcctac
gtggtgctcacctccgtcaacatcctcatcggcatcaacggcagcatctccacctttgtc
atggagctctttgggaacaacgagattggaggtatcaatgacatcctgaagaacgttttg
ctgatatttcctcacttctgtttgggtcgaggcctcatcgacatggtgaagaaccaggcc
atggccgacgctctggaaagattcggtgagaatcgcttccgatcccctctggaatgggac
atggtgggcaagaacctgtttgccatggccgtggaaggagtggtcttcttcattatcacc
gtcctcatccagtaccgcttctgcatcaaacccattaacctgcacaccaagctccctccg
gtaggcgaggaggacgaggacgttgccagagagaggcagaggatcgtcaacggactggga
cacggagacatcctggagctccgacagctcaccaaggtctacaaaaggaagcagaagccg
gcggtggaccgcctgtgtgtgggcatccctcctggagagtgctttggcctcttgggtgtg
aacggagctggaaagaccaccaccttcaaaatgctgacaggagactccatagtcaccagt
ggagaggctttcctggccggaaaaagtatactgcgggagatagacgaggtgcaccagaac
atgggctactgccctcagtttgacgccatcaacgacctgctgacaggaagagagcacctg
gagttctacgccgtcctgcgcggcgtgcccgagaaggaagtgtgcgaagttgccgaatgg
ggcatccgtaagctgggcctagtaaagtatgtggacaaggcagcgggaagctacagcgga
ggaaacatgaggaaactctccaccgccatggccctgataggaggaccacctgtcgtgttc
ctggacgagcccaccactgggatggaccccaaagcacgcagggccttatggaactgcatc
cacagcgtcatcaaggagggacgctccgtggtgctcacctcgcacagtatggaggaatgt
gaggccctgtgcaccagaatggccattatggtcaatggcaggttccgctgcttggggagc
gttcagcacctaaagaacaggttcggagacggctacaccatcattctgcgtgtggctggg
ccggaccctgacctgccgccggtgatgaagttcattgagagtaagctgcctggcagcacc
ctgaaggagaagcacaggaacatgctgcagtaccagctgtcctcctcactcacctccctg
gcacacatcttcagcatcctggccaagaacaaggaccttcttcggatagaggactactcc
gtgtcgcagaccacactggaccaggtttttgtgaactttgccaaggaccagagtgacgat
taccactcaaaagacaattcagtaaagcgcaaagaggcggtggtggacattaccccgctc
agctcacggcaggctgaagagaagctagccgaggagaggctaaaggagagcttggtgtga
DBGET
integrated database retrieval system
