Salvelinus fontinalis (brook trout): 129827952
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Entry
129827952 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130-like isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129827952
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129827952
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129827952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
129827952
NCBI-ProteinID:
XP_055745233
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All DBs
Position
29:complement(37387562..37455726)
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AA seq
437 aa
AA seq
DB search
MPKRWTAATPCSHLPLVLLVLVLPRCILSIRADKTISKEDHVTATVNATVLDSKGNPKQI
LTKDDGTYGQNSPKVDAKGIVIGPAPNHGVVDLQGCDPHTRFVVPPRTGHWVALLQRGNC
TFKEKILKASAFNASAVLIYNNNSNEDTVKMGHEGTGDTVAVMITESYGKEILGLLERNL
TVLVSVVVGQRGQAKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRFTNARDRSQVG
HRRRLGDAAKKAIGKLTTRTVKKGDKETDPDFNHCAVCIEGYQLNDVVRILPCKHVFHKL
CVDPWLNEHCTCPMCKLNILKALGIMPNLPCVDNAGFDMDHRIGRSQTMASQRTALVDLS
SETSISLEPLQRGPLGTGPQIPSESGELTPRTGEINIAVTKEWFIIASFGLLSALTLFYM
IIKATASFSSPDLEWEE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaggtggaccgcagcaacgccatgcagccatctccctctcgtcttgttggtg
ctcgttctgcccaggtgtatactgtcgatccgtgccgacaaaaccatcagcaaggaagac
catgttactgctacggtcaatgccaccgtacttgactccaaaggcaatccaaagcaaatt
ctaaccaaggacgatggcacgtacggccagaattcaccgaaagtggacgcgaaaggaatc
gtgattggacctgcaccgaatcatggagtggtggacctccagggctgcgacccccacact
cgcttcgtggtgcccccccggacggggcactgggtggccctgctgcagcgcggcaactgc
accttcaaagagaagatcctcaaggcctccgctttcaacgcctccgccgttctcatctac
aacaacaactccaatgaggacaccgtcaagatgggccatgaaggtacgggtgacactgtg
gcggtgatgatcactgagtcgtacggcaaggagatcctgggtctgctggagaggaacctg
acggtgctggtgagtgtggtggtgggccagcgtggccaggccaagaatatcaaccgcggc
tccctggtcttcgtctccatctccttcatcgtactcatgatcatctcctctgcgtggctc
atcttctacttcatccagaagatacgctttacgaacgcacgtgaccgcagccaggtagga
catagacgtcgacttggagatgccgctaagaaagccatcgggaagctgacaaccaggacg
gtgaagaaaggggacaaggagacagacccggacttcaaccactgcgctgtgtgcatcgag
ggttaccagctcaacgacgtggtccgcatcctgccctgcaaacatgtcttccataagctg
tgtgtggacccctggctgaacgagcactgtacctgccccatgtgtaagctgaacatcctc
aaagctctgggcatcatgcccaacctgccgtgcgtggacaatgccggttttgacatggac
cacaggatagggcgcagccagacgatggccagccagcggacggccttggtggacctgtcc
agtgagacgtccatcagcctggagcctctgcaacgaggccccctcggtaccggaccccag
atcccctccgagagcggagaactcaccccgcgcaccggagagatcaacatcgccgtcacc
aaggagtggtttataatcgccagcttcggccttctcagcgctctcacattgttctatatg
atcatcaaggccactgccagcttctccagccctgacctggagtgggaggagtaa
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