Salvelinus fontinalis (brook trout): 129828003
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Entry
129828003 CDS
T11136
Symbol
vimr2
Name
(RefSeq) alpha-internexin
KO
K07606
vimentin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129828003 (vimr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129828003 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129828003 (vimr2)
04147 Exosome [BR:
sfon04147
]
129828003 (vimr2)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
129828003 (vimr2)
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
129828003 (vimr2)
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129828003 (vimr2)
Exosomal proteins of other cancer cells
129828003 (vimr2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DivIC
TPR_MLP1_2
Phage_cement_2
PI3K_P85_iSH2
Filament_head
FapA
Motif
Other DBs
NCBI-GeneID:
129828003
NCBI-ProteinID:
XP_055745367
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All DBs
Position
29:complement(42740174..42759245)
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AA seq
393 aa
AA seq
DB search
MAMLRVSSYRRQFEEQRSRNGRSSGGCGGQYRSSAVKARGAAAEECTCDQLDFVAAKTLN
KESLVRFAKDRSIIAALNDRFVALINMARCFEEDNESLEAQICELEERMTGQQTTSTAVA
VPEYSLDAVVERLRKERDQSLFDVEELRRELECLQEQYEETVQQRTLIQLEQEDVGLEVD
VVTADCLALREQVKIYEEQLARMEAQHETTVQNMVAPVDGPAAAGRGVLEFCNPDIKSAI
IYIKENYSQLGETIQCECRETGVVVAGAVVAIGAGKELTVARPAGVTGVGQITGVSELKK
LIAELEKELAELEKCGEELEDEIEMKREAYVEEIFELECRIEEMREQQHDMQVQMREQCD
DYEELLGQKMAREIEIAAYRGLVEEEDERLCYL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgagagtgtcgtcctaccgccggcagtttgaggagcagaggagtcggaat
ggacggtccagcggtggctgtggagggcagtaccgctcctcagcggtcaaggccaggggt
gcggctgctgaggagtgtacgtgtgaccagctggactttgtggctgccaagacgctcaat
aaggagagtctggtccgattcgctaaagaccgcagcatcattgccgccctaaatgatcgc
tttgtcgccctcatcaacatggcacgctgctttgaggaggacaatgagtctctggaggcc
cagatctgtgagctggaggagaggatgaccggccaacagaccacctccactgccgtagct
gtccctgaatacagcctggacgccgtggtggagagactgcgcaaggagagggaccagagc
ctgtttgatgtggaggagctgaggagagagctggagtgtctgcaggagcagtatgaggag
accgttcagcagaggaccctcatccaactggagcaggaagacgttggcctggaagtggat
gtagtgaccgcagactgtctggccctgagggagcaggtgaaaatctatgaggaacaactg
gctcgcatggaggcacagcatgagacgacggttcagaacatggtggcccctgtagatggt
ccagctgcagcagggagaggagtcctggagttctgcaaccctgacatcaagtcagccatc
atatatatcaaggagaactacagccagctgggtgagaccatccagtgtgagtgcagggaa
actggtgtggttgttgctggtgctgttgtcgccattggtgctggaaaggagctgacggtg
gccagacctgcgggggtcacaggcgttggccaaataacgggcgtcagcgaactgaagaaa
ctgattgcagagcttgaaaaggagcttgcagagctggagaagtgtggtgaggagctggaa
gatgagattgagatgaagagagaagcgtatgtggaggagatctttgagctggagtgtcgt
attgaggagatgcgggagcagcagcatgacatgcaggtccagatgagggaacaatgtgat
gactacgaggagctgctgggtcagaagatggcccgggaaatcgagatcgctgcctacaga
ggtttggtggaagaggaggatgagaggctttgctacctgtga
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