Salvelinus fontinalis (brook trout): 129828003
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Entry
129828003 CDS
T11136
Symbol
vimr2
Name
(RefSeq) alpha-internexin
KO
K07606
vimentin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04519
Cadherin signaling
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129828003 (vimr2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129828003 (vimr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129828003 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129828003 (vimr2)
04147 Exosome [BR:
sfon04147
]
129828003 (vimr2)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
129828003 (vimr2)
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
129828003 (vimr2)
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129828003 (vimr2)
Exosomal proteins of other cancer cells
129828003 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DivIC
TPR_MLP1_2
Phage_cement_2
CCDC57_N
PI3K_P85_iSH2
CCDC89
Filament_head
FapA
Motif
Other DBs
NCBI-GeneID:
129828003
NCBI-ProteinID:
XP_055745367
LinkDB
All DBs
Position
29:complement(42740174..42759245)
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AA seq
393 aa
AA seq
DB search
MAMLRVSSYRRQFEEQRSRNGRSSGGCGGQYRSSAVKARGAAAEECTCDQLDFVAAKTLN
KESLVRFAKDRSIIAALNDRFVALINMARCFEEDNESLEAQICELEERMTGQQTTSTAVA
VPEYSLDAVVERLRKERDQSLFDVEELRRELECLQEQYEETVQQRTLIQLEQEDVGLEVD
VVTADCLALREQVKIYEEQLARMEAQHETTVQNMVAPVDGPAAAGRGVLEFCNPDIKSAI
IYIKENYSQLGETIQCECRETGVVVAGAVVAIGAGKELTVARPAGVTGVGQITGVSELKK
LIAELEKELAELEKCGEELEDEIEMKREAYVEEIFELECRIEEMREQQHDMQVQMREQCD
DYEELLGQKMAREIEIAAYRGLVEEEDERLCYL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgagagtgtcgtcctaccgccggcagtttgaggagcagaggagtcggaat
ggacggtccagcggtggctgtggagggcagtaccgctcctcagcggtcaaggccaggggt
gcggctgctgaggagtgtacgtgtgaccagctggactttgtggctgccaagacgctcaat
aaggagagtctggtccgattcgctaaagaccgcagcatcattgccgccctaaatgatcgc
tttgtcgccctcatcaacatggcacgctgctttgaggaggacaatgagtctctggaggcc
cagatctgtgagctggaggagaggatgaccggccaacagaccacctccactgccgtagct
gtccctgaatacagcctggacgccgtggtggagagactgcgcaaggagagggaccagagc
ctgtttgatgtggaggagctgaggagagagctggagtgtctgcaggagcagtatgaggag
accgttcagcagaggaccctcatccaactggagcaggaagacgttggcctggaagtggat
gtagtgaccgcagactgtctggccctgagggagcaggtgaaaatctatgaggaacaactg
gctcgcatggaggcacagcatgagacgacggttcagaacatggtggcccctgtagatggt
ccagctgcagcagggagaggagtcctggagttctgcaaccctgacatcaagtcagccatc
atatatatcaaggagaactacagccagctgggtgagaccatccagtgtgagtgcagggaa
actggtgtggttgttgctggtgctgttgtcgccattggtgctggaaaggagctgacggtg
gccagacctgcgggggtcacaggcgttggccaaataacgggcgtcagcgaactgaagaaa
ctgattgcagagcttgaaaaggagcttgcagagctggagaagtgtggtgaggagctggaa
gatgagattgagatgaagagagaagcgtatgtggaggagatctttgagctggagtgtcgt
attgaggagatgcgggagcagcagcatgacatgcaggtccagatgagggaacaatgtgat
gactacgaggagctgctgggtcagaagatggcccgggaaatcgagatcgctgcctacaga
ggtttggtggaagaggaggatgagaggctttgctacctgtga
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