Salvelinus fontinalis (brook trout): 129828198
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Entry
129828198 CDS
T11136
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04060
Cytokine-cytokine receptor interaction
sfon04217
Necroptosis
sfon04620
Toll-like receptor signaling pathway
sfon04621
NOD-like receptor signaling pathway
sfon04622
RIG-I-like receptor signaling pathway
sfon04623
Cytosolic DNA-sensing pathway
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129828198
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129828198
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129828198
04621 NOD-like receptor signaling pathway
129828198
04622 RIG-I-like receptor signaling pathway
129828198
04623 Cytosolic DNA-sensing pathway
129828198
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129828198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sfon04052
]
129828198
Cytokines and neuropeptides [BR:
sfon04052
]
Cytokines
Interferons
129828198
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF5798
Motif
Other DBs
NCBI-GeneID:
129828198
NCBI-ProteinID:
XP_055745439
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Position
2:complement(79937788..79939246)
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AA seq
186 aa
AA seq
DB search
MGSVSFWMCLVMTICTWNRTIGCTWMRTLPRSPSMFQVFSNNTITMLQKMGHEVSREPQI
TFPDKQYRQVNNFKADEQVAFISHTLNAIKKLYSSGKYESTAWDLKGVDKFMNDLYRQTS
ELDQCVKAMKTSQSKSVKRVNKKMSLHFKFLKNYLKREDYSASGWEDIRTVVLAHLQRLD
TTLSSQ
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagtcagcttttggatgtgcttggtcatgacgatttgcacctggaatagaacc
atcggatgcacgtggatgaggacactgcctcggtctccgagcatgttccaagtgttcagc
aacaacaccataacgatgcttcagaaaatgggtcatgaagtctctcgagaacctcagatc
actttccctgacaaacaatacagacaagtcaataatttcaaggctgacgaacaggtggcc
ttcatttcgcatactctgaacgctataaagaaattgtacagcagtggtaaatatgagtcc
accgcctgggacctgaaaggagttgacaagtttatgaatgacctctatcgccagacctcg
gagctggatcaatgcgtaaaggctatgaaaactagccaatcaaaatctgtcaaaagagtg
aacaaaaagatgagccttcacttcaagttcctgaagaattacttgaaacgcgaggattac
agcgctagcggctgggaagacataaggacagtggtgctggcacacctacaaagactagac
acaacattaagtagccaatga
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