Salvelinus fontinalis (brook trout): 129828578
Help
Entry
129828578 CDS
T11136
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129828578
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129828578
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
Ig_VEGFR-1-like_5th
LRR_14
LRR_5
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
129828578
NCBI-ProteinID:
XP_055745598
LinkDB
All DBs
Position
30:complement(6591026..6598043)
Genome browser
AA seq
659 aa
AA seq
DB search
MFRGFSLGFCLALFCFGPFVCSACPSQCNCFFHKLSDGSKARSVLCNDPQITLVPPNFPA
DTSKLRIEKTAITKISGETFHYLTRLEFLRVSFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNSLATVPPEVLSMWL
SVKPSQEDGDSSKYILGLHDNPWLCDCRLYDLVQFQKSPSSSVVLIDTKLRCADPESLSG
VQFSETELQRCQGPRVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSILSVPAVSYRDSGKYMCKATNFVGTADAIISLVITDSFKNEEQGGSSKT
RNQRGRKTGGFGKAAYQEKLVARYVPPLTTTAATPIIEPLGPSGFTGKYDIESYSILDSV
ADGQAPGPPAMEPAINEVEKEVLSNLAANASSLQAPAPPEKRVVRSVKVIGDTDHTVSLN
WRSPTAKNTTEFSVLYAVFGERDMRRINVGVGKNRITIDGLVPRTKYIACVCVKGLIPKK
EQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKDI
QDSYVTFETLSPGQKPKGMEGEYLARQQPGESNRLLSARSSVDSEATCRNEGPPNEYFC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaggttttagtctgggtttctgtttggcattattttgcttcggaccgtttgtt
tgcagcgcttgtccgtctcaatgtaactgtttctttcacaaattatcagatggatccaaa
gcaaggagcgtactttgcaatgacccacagattactctggtcccacccaacttccctgca
gacacctccaaactgcggatcgagaagactgccatcacaaaaatctccggcgaaactttt
cactacctcacccgtttggaatttctccgagtgtctttcaattctctgaactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctctttcccctgggaatctctgactgatatgcccgacctgaggctactggacctgcat
aataataagatatcgtcgatcccggccgaggcgaccatttatatcaagaacctgacctac
ctggacttatctagcaacagcctagccacggttcctcctgaggttctctctatgtggtta
tctgtgaagccgtctcaagaagatggggacagttccaaatatattctaggtctccatgac
aacccatggctctgtgactgccgcctctatgacctggtccagttccagaagtctccgtcg
tcctctgtggttctgatcgacaccaagctgcgctgtgctgatccggagagcctgtcgggg
gtgcagttcagcgagacggagctccagaggtgccaggggccccgtgtccacacggctgtg
gctcgggtcaggagctccctggggaacaacgtcctgctacgctgtgggaccatcggagtc
ccagtaccagagctgtcctggactcgggcagacggcaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaataatttggtccatcctgagtgtgcctgccgtctcttac
cgggactctgggaaatacatgtgcaaagccaccaacttcgtggggactgcagatgccatc
atctccctggttattacagactcctttaaaaatgaggaacaaggtggcagctccaagact
agaaaccaaagaggacggaaaaccggtggatttgggaaagctgcctaccaggagaaactt
gttgccagatacgtacctccactaaccaccacggcagccacgcccatcatcgagccacta
ggaccgagtggtttcacagggaagtatgatatcgagagctacagtattttggacagtgtg
gccgatggacaggcgcccggtcctcctgccatggagccggcgattaacgaagtggagaag
gaggttcttagcaacctggcagccaacgcctcttctttgcaggcaccggcgccgccggag
aaacgggtggtacgatcggtgaaggtgatcggggacaccgatcacaccgtctccctgaac
tggcggtccccgacggccaagaacaccaccgagttcagcgtcctgtatgccgtgttcggc
gagagggacatgcggaggattaacgtaggcgtgggaaagaaccgtatcaccatcgacggc
cttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaagaaa
gagcagtgtgtaatcttttcaacggacgaggcggccagcgcaagcggcacccagaaactc
attaacgtggtggtgatcaccgtggcctgcgtgatcgctgtccccctgacactgatcgtc
tgctgcggggcactcaagaagcgctgtaaaaagctactggggaggaaatccaaagatatt
caagactcatacgtaacatttgagaccctctccccgggacagaagcctaaggggatggag
ggggagtaccttgccaggcaacagccaggcgagtccaacagactgctctctgctaggtcc
agtgtggactctgaggctacttgtaggaatgagggaccccctaatgagtacttttgttga
DBGET
integrated database retrieval system
