Salvelinus fontinalis (brook trout): 129828681
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Entry
129828681 CDS
T11136
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129828681
03036 Chromosome and associated proteins [BR:
sfon03036
]
129828681
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129828681
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
Helicases
129828681
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129828681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129828681
NCBI-ProteinID:
XP_055745787
LinkDB
All DBs
Position
30:complement(14143822..14151923)
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AA seq
770 aa
AA seq
DB search
MPSKIIFENEDIGMEGEMDISAGSTTPKKIKEKKTKEGKKIKKQKTVVEEEPDCEPPAPK
KKKKKKEKEDSTNGGAEVDVNGNAQVDVNGNAQESPLKDNTSHSNEESADNDKATEKKKK
KKKKEKKTDEKVIVNGVFPETPKLIAQTNGHTAATTPAQSSEDSESGVETETPEQKEGAF
SNFRISPNTIKLLEARGISYLFDIQTQTFNSVYEGKDVIGQARTGTGKTLAFAIPLIEKL
QNDPDDKKRGRAPKILCLAPTRELAIQVSKDFKDMTKKLSVTCFYGGSSYNPQLDAIRSG
IDILVGTPGRIKDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYQKGSETN
PQTLLFSATCPSWVYDVAKRYMRPNYEHVDLIGKKTQKTATTVEHLAIACHWSQRAAVIG
DVVQVYSGSHGRTIVFCETKKDANELSMNASIKQSSQSLHGDIPQKQREITLKGFRSGTF
EVLVATNVAARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRREEDQ
LRYVEEKACITFKRVGVPTANDIIKSSSKDAVRFLDSVPPQAIEYFRVSATKLIEERGAV
EALSAALAHISGATALEQRSLLNSDTGYTTMTMNSSQELQNIGCAWRGLKEQLGEEIDNM
IRGMTFLKGKMGVCFDVPADKVKEYQDAWQDGRRWQLSIATELPELEEKPRMGGDRGYGR
SFGGQGGDRGYGRSFGGQGGGRGFRNGGGGGGNWRGGGSHKRSFSSAFDY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaagattatttttgaaaacgaagacatcggaatggaaggtgaaatggacatt
agtgcgggcagtacgacacccaaaaaaataaaggagaagaagaccaaggagggaaagaaa
atcaagaaacagaaaacggttgttgaagaggaacctgactgtgaacctcctgctcccaag
aagaagaagaagaagaaggaaaaggaggactcaactaacgggggcgcagaagttgatgtt
aacggcaacgcacaagttgacgttaacggcaacgcacaagaatcacctttgaaggacaac
acatctcattccaatgaggagtctgcagacaatgacaaagcaaccgagaagaaaaagaag
aagaagaaaaaggaaaaaaagacagatgaaaaagtcatcgtcaacggagtgtttcctgag
actcccaagctgattgcacaaactaatgggcataccgcggcgacaactccagcacaatca
agcgaggactccgaaagtggagtagaaaccgagacaccagaacagaaagagggagccttc
tctaacttcagaatctcccccaacaccattaaactacttgaagcaagaggaatatcttac
ctctttgacatccaaacacaaaccttcaattctgtgtacgagggaaaggatgtgattggc
caggcaagaacaggcactgggaaaactttagcttttgccattccgctgatcgagaaactc
caaaatgacccagatgacaagaagaggggcagagccccaaagatattgtgccttgctcca
accagagaattggctattcaagtatccaaggatttcaaggacatgacaaagaaactgtct
gttacatgtttctatggtgggagctcctacaacccccaacttgatgcgatccgcagtggc
atcgatatcctagtgggaactccaggtcgtatcaaggaccatctacagaataacaaactg
gacctgtctcaattgaagcacgttgtattagatgaagtggaccaaatgcttgatatgggc
tttgcagaacaggtggaggagatactgtctgcgtcttaccaaaaaggctctgagaccaac
ccccagaccctgctcttctctgccacatgcccatcatgggtgtatgatgtggcaaagagg
tacatgaggccaaactatgagcatgtggacctcattggcaaaaagacccagaaaactgcc
accacagtagagcaccttgctatagcgtgtcactggtcccagagggctgcagtcattggg
gatgtggtgcaggtttacagcgggagccacggccgcaccatcgttttctgtgagaccaag
aaggatgccaacgagctgtcaatgaacgcctccataaagcagagttcccagtcacttcat
ggggacattcctcagaagcagagggagatcacactgaagggcttcagaagtggcaccttc
gaggtcttagtggccaccaacgttgctgcccgcgggttggacatcccagaggtagacctg
gtcgtgcagtgctcacccccaaaggatgtggagtcctacattcaccggtcaggtcgaact
ggtcgggctggcaggactggcgtctgcatctgtttctaccaacgcagagaagaagaccag
ctccgatatgtagaggagaaagcatgcattacatttaagcgggttggagtgcccactgcc
aatgacatcatcaaatcgtccagtaaagacgcagtgaggtttttagactctgtgcctccc
caagccattgagtatttccgcgtgtctgctaccaagctgattgaggagcgtggggccgtg
gaggccctgtctgccgccctggcacacatatcaggagccactgctttggagcagaggtcc
ctcctcaactctgacactggctacaccacaatgacaatgaacagctcccaggagctgcaa
aacattggctgtgcctggcgtggtctgaaggagcagctgggagaggagattgacaacatg
atccgggggatgaccttcctcaagggcaaaatgggagtctgttttgatgttccggctgac
aaggtaaaggagtaccaggatgcctggcaggacggtagacgttggcagctgtcaatcgcc
acagagcttcctgagctggaggagaaaccgcgcatgggtggtgaccgtggatatggacgt
tccttcggaggacagggaggtgaccgtggatatggacgttccttcggaggacagggaggt
ggccgtggcttcagaaacggaggaggcggaggcggcaactggagaggtggaggcagtcat
aaacgcagcttcagcagtgcgtttgattattaa
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