Salvelinus fontinalis (brook trout): 129828777 Help Entry 129828777         CDS       T11136                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism sfon  Salvelinus fontinalis (brook trout) Pathway sfon03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sfon00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     129828777 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sfon03400]     129828777 (msh6) DNA repair and recombination proteins [BR:sfon03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      129828777 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  129828777 NCBI-ProteinID:  XP_055745952 LinkDB All DBs Position 30:complement(20234504..20266626) Genome browser AA seq 1385 aa AA seqDB search MAKQSSIFNFFNKSPPPVLKAKPSPSPAEADLPSSVRKKNSSPKEKAKHASQNPTTKKTP AKPLNAKASKGGIGELFGNKTLTVKESPEPCPFSAGALVWAKLEGHPWWPCMVVPHPIGG EQMRGRGKSQRLHVHFFDEPPTRGWVSTKYIHEYQGSDSRDAKTGGVFFSGKPVICRAKE LADAVMPDSPETRLKMPVCMAPSDAEEDEEEDMELDKSTLTDEDLTEEEDETVKSKPSRC SSRATAEQSSKSKRRRIVVACDSEGSGEEFKPEQAVWSSEEDEEEVVNSASEEDVESECE TEPDSPVKPVKRKRPAEKPSSAKPKPKTPALPETAKRAPLSSTITADTKSRLSGFSAPES FDSQTNGSGAGGQGGATVWDHEKLDWLQEGRRKDAKRRRQSEEDYDPTTLYVPEDFLNKT TPGMRRWWQLKSETFDAVLFFKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIGF GRFSDGLVQRGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVQREVCRIITRGTQTYSV LDGAPSETHSKYLLSIKEKAEEESSGHCRTYGVSFVDTSVGYFHVGQFQDDRHCSRLRTL LSHYAPAQVLFEKGNPSAETRKIFKASLSSAMQEGLTAGSQFWDAQKTLKTLAEEDYFKE SVRKDEESGSSVLPSVLKSMTSESDSLGLTPKEGYELALSALGGCMFYLKKCLVDQELLS MTNFQEYIPVDVEMEKAAGPTSFFSQTRQRMVLDGVTLANLEILQNVSGGTEGTLLERLD TCSTPFGKRLLKQWLCSPLCNPTSIGERLDALDDLMGVQAQATEVSDLLKKLPDLERLLS KIHSIGTPKGQDHPDSRAVLYEEVTYSKKKIADFLSALEGFKTMQEIVTILGPVAVDFRS RLLRQVVNLKDDGQEGLFPDLSAELKRWDTAFDHQKARTTGVITPKAGFDPEFDQALSGI KACERDLQDYLDRQKKRLGCRNLTYWGTGRNRFQMEVPDSVSERNIPEEYKVKSTKKGWK RYWTREIERLFSELQSLEEKRDAALKDCMRRLFYNFDKNYRDWQTGVECMAVLDVLLSLT RYSQGGDGGPMARPQVLIPGDISQSAAFLDLRGSRHPCVTKTFFGDDFIPNDIAIGCPGG EEEGQEDKGHAPCVLVTGPNMGGKSTLMRQCGLVVVLAQLGCYVPAESLSFTPVDRVFTR LGASDRIMAGESTFFVELSETASILHHGTKHSLVLLDELGRGTATYDGTAIASAVVNELA ERICCRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENEGDEDPSQETITFLYKFIAGACP KSYGFNAARLANLPEDVIQSGHRKAKEFERSTISLRVFKKLCLYAEDPTAASTQFALLVR MISNL NT seq 4158 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagcagcattttcaattttttcaataagtctccaccaccggttctgaag gcgaaaccgagtccctcacctgcagaagccgacttgccatcctcagttcgaaaaaagaac agctctccaaaagaaaaagctaagcatgcatctcaaaatcccaccaccaaaaagactcct gcaaaaccccttaatgcaaaagcgagcaaaggcgggatcggcgaactctttgggaataag acactaacagtaaaggagagtccagaaccatgtccattcagtgccggagccttggtgtgg gccaagctagaggggcacccctggtggccgtgtatggtagttccccatcctatcggcggg gagcagatgaggggcaggggtaaaagccagcgcctgcatgtccacttcttcgacgagcca ccgaccaggggctgggtcagcaccaaatatatccacgaatatcaaggctcggacagcaga gatgctaaaacaggaggggtgttcttcagtggtaagcctgtgatctgcagggccaaggag ctggctgatgctgttatgccagacagcccagagaccagactgaagatgcctgtctgtatg gccccatctgatgctgaggaagacgaggaggaggatatggagcttgataagtcaacattg accgacgaagatttgactgaagaggaagatgagacagtgaagtcaaagcctagtcgctgt tcctcccgtgccacagcagaacagagcagcaagtccaagcgtcgccgcatcgttgtcgcc tgcgacagtgaaggctcgggtgaggaattcaaaccagaacaggccgtatggagcagtgag gaagatgaggaagaggtagtgaacagtgcatcggaggaagatgtagaaagtgaatgtgag actgaacccgacagcccagttaaaccggtgaaacgcaaacgacccgcagagaagccatcc agtgccaaaccaaaacccaagactcccgctcttccagaaaccgccaagagagccccctta tctagcaccatcacagccgacaccaagtctcgactctcaggcttttcggccccggagagc ttcgacagccagacgaatggctcaggtgccggcgggcaaggtggggctacggtatgggac catgagaagcttgattggctacaggaaggccggaggaaagacgccaagagacggagacag tctgaggaagactacgaccccacgactctgtatgtcccagaagacttcttgaacaaaacg accccaggcatgcggcgctggtggcagctcaagtcggagacgttcgatgccgtactcttc ttcaaggtgggtaagttctatgagctgtaccacatggatgctgtgattggtgtcaacgag ctgggtctgaccttcatgaagggggcctgggcccactctggcttccccgagataggcttt ggacgcttctcagacggactggtgcagaggggatacaaggtggcacgtgtggagcagacg gagactccagacatgatggaggctcgctgtaagaccatgctgaagcccaccaagtttgac cgggtggtacagcgtgaggtgtgccgaatcatcacacggggaacgcagacctacagcgtg ttggacggagccccttctgagacacacagcaaatacctcctcagcatcaaggagaaggca gaggaggagagttcagggcactgcaggacctatggggtcagcttcgtggacacatctgta gggtacttccatgtgggccaattccaggatgaccgacactgctcccggctccgcaccctg ttgtctcactacgcccctgcacaggtgctctttgagaaggggaacccttcagccgaaaca cgtaaaatcttcaaggcttctttgtcctcggctatgcaggaggggctgactgcaggctcc cagttctgggatgcacagaagaccctgaagaccctagctgaagaagactactttaaggag agtgtgaggaaggatgaggagtctgggagcagtgttctcccctctgtcctcaaatccatg acgtctgagagcgattcgttgggtctgacccctaaggaggggtatgagttggccctgtcg gccctgggaggctgtatgttctacctaaagaaatgtctggtagaccaggagctgctgtcc atgaccaacttccaggaatatatcccagtggacgtggagatggagaaggcagccgggccg accagtttcttctcccagacccgtcagcgtatggtcctggatggggtgaccctagccaac ctagagatcctgcagaatgtgtcggggggtacagaggggaccttgttggaacgcctggat acctgtagtactccatttggtaaaaggttgctgaagcagtggctctgttccccgctctgt aaccccacatccataggggaacgtctggatgctctggatgacctgatgggagtgcaggcc caggctacggaggtctcagacctgctcaagaagctccctgatctggagaggctccttagt aagatccacagcatcggtactccgaagggtcaggaccacccggacagcagggctgttctg tatgaagaggtcacctacagtaagaaaaagattgcggacttcctctctgctctggagggc ttcaagaccatgcaggagattgtgaccatactaggaccggtcgcggtcgacttccggtcc aggctgctgcgccaggtggtcaacctgaaggatgacggtcaggagggcctcttccctgac ctgtcggccgagctgaaacgctgggacacagccttcgaccaccagaaggcccgcaccacc ggagtcatcacccctaaggctggctttgacccagagtttgaccaggctctcagtggcatc aaggcctgtgagagggacctacaggactacctggacaggcagaagaagaggctgggctgc aggaacctgacctactgggggacgggacggaaccgctttcagatggaagtaccagacagt gtctcggagaggaacattcctgaggagtacaaggtgaagtccactaagaagggctggaaa cgctactggaccagggagatagagcgtctgttctcagagctccagagtcttgaggagaag agagacgcagctctgaaggactgcatgagaagactcttctacaactttgacaagaactac agggactggcagactggggtggagtgcatggctgtgctagatgtgttactgagtctgaca cggtacagccagggaggagatggaggaccaatggcacggcctcaagtactaattcctggt gacatcagccaatcagcagccttcctggacctgaggggctcccgccacccctgtgtcacc aaaaccttcttcggtgatgacttcatccctaatgacattgctattggctgccctggcggt gaggaggagggccaggaggataaaggacatgcaccctgcgtgctggtcactgggcctaac atgggaggaaagtcgactcttatgagacagtgtggtctggtggtggtcttggcccagttg ggttgctatgttcctgctgagagcctgtcctttacccctgtggacagagtcttcacacgc ttgggagcatcggaccgtatcatggctggggagagcaccttctttgtagagctcagtgag actgctagtatcctccaccatgggaccaagcactccctggtgctgctggatgaactggga aggggcacagccacatatgacggcacagcgatagccagtgctgtggtgaacgagctggcg gaaaggatatgctgtcggaccctcttctccacacattaccactccttagtagaagactac accaacaaccctgctgtacggctcggacacatggcctgtatggtggagaatgagggagat gaggaccctagtcaggagaccatcaccttcctctacaagtttatcgcgggagcatgtcct aaaagctacggtttcaacgctgctcgcctcgccaacctgcctgaggatgttattcaatca ggccacaggaaggccaaggagtttgagaggagcaccatttccctacgagtcttcaagaag ctgtgcttgtatgctgaagaccccacagcagccagcacacagtttgccttgctcgtccgg atgatcagcaacctgtga

DBGET integrated database retrieval system