Salvelinus fontinalis (brook trout): 129828791
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Entry
129828791 CDS
T11136
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
sfon Salvelinus fontinalis (brook trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
S1_RRP5
PSD5
Anophelin
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
129828791
NCBI-ProteinID:
XP_055745974
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Position
30:21287735..21383717
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AA seq
1029 aa
AA seq
DB search
MQRRTRTVKVYTEKTTDGDSDELSPHTQSASEDEIEEWQPESKAPKRQQKAQPSEKKPAV
KRQAKPKEPKESKPKAPRKPVERKPRAPRAPKEPKPPKAPRAPKEPKPPKEPKPPKEPKP
PKAPRATKGVKKQQALLEEEAGGANQTNSICDAAESQQSARVKEERLSFIVPDGSCNDNM
SSAGGGWSEGPSSSHQSYGVKKEEPEEDFTFDEPSLKRQKTSSAPQGRPTRLPTSGRAFG
EDLSMNWDLIQLLSERTGVEQWVCLNISKLFREENTIPFIVRYRKEMINHMDADAVRDVQ
LVLEEIYALAKKTQTISQTLKKEGVLTAELEQALRNCRTADELDHVYAPYKKGSKLSKAR
RAKQLGLESAAQALLQSPHTLDLRAWVKPGTEGLSTVEEVSTGVEQILADMIAKDGETLT
HIRSLCDNSMVMLQSAVSKTALKEQQKEGHQGKPKDIDKFHLYCDFTCNVQRIQHHQTLA
INRGENLKILTVKVNIPDRVKSDFCRWCVNVRWRPKGYAREELMKILRDAVEDSYKRLLL
PLLSRSYRTKLTVSAEKESIAMFVRNLRQRLLVCPVRGRVIMGVDPGFRHGCKLAVLSPT
SQILYTDVVYLHGSGGNREADKLRHLMIRYSCNMVVIGNGTACRETEAFFADLISRRFFQ
PLDVSYCITSEAGASIYSVSTEAVKEMPDLDPNLRSAVSIGRRVQDPLAELVKIDPKHIG
IGTYQHDVSQSSLKAALDGVVQECVSFVGVDINICSETLMRHVAGLNTGRAKSIAEWRET
NGPFMNRDQLRLVKGLGPKSYQQCAGFIRINPQNHLNNHSDVTGGNSAQAAQEKPAAKGK
GKTKASAAVPTLPNPLDQTCIHPESYAVARSFLSLVGGSVDQVGRSELRQCVEASVKCQG
LEALAETLNTTPDTLQLIIDGLTQPPGFDIRQDFEKADFKRGIVSMSDLREGVVLTGRVE
NATLFGAFVDIGVGRNGLIHKKYITPDKLPADQRRRSLALGPGEKVEVRVLNVDPQRGRI
GLDLIRVLK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcaacggcgaactcgcacagttaaagtctacacggaaaagacaacagatggagattcc
gatgaacttagtcctcacactcagtcagcgagtgaagatgagattgaagaatggcagcca
gaatccaaggcccccaagaggcagcagaaagctcagccaagcgagaagaaaccagcggtg
aagaggcaggctaaacctaaagagcccaaggagtccaaacccaaagccccacgcaaacca
gtggagaggaagccccgagctcccagagcccctaaagaacccaaaccccctaaagctccc
agagcacctaaagaacccaaaccccctaaagaacccaaaccccctaaagaacccaaaccc
cctaaagctcccagagcaacaaaaggagttaagaagcagcaagctctattagaggaagag
gctggaggagccaatcagactaactccatctgtgatgcagcggagtcacagcagtcagcc
agggtcaaggaggagagactgtctttcattgtgcctgatggatcctgcaacgacaacatg
tccagtgcagggggcgggtggtccgaggggccctcctccagccatcagtcttatggggtg
aagaaggaagagcctgaggaggacttcacgtttgatgagccttctctgaagagacagaag
accagcagtgcccctcagggcaggcccaccagactgcccacctcaggaagagcctttgga
gaagacctgagcatgaactgggaccttattcaattgctgtctgagaggacaggggtggag
cagtgggtgtgtttgaacatttccaagctcttcagagaggagaacaccattccctttata
gtccgctacaggaaagagatgatcaaccacatggacgcagacgccgtgagggacgtgcag
ctggtgctggaggagatctatgcactggcgaagaagacgcagactatcagtcagactctt
aagaaggagggagtcctgactgctgagctggaacaggctctgaggaactgcaggaccgct
gatgaactggaccacgtgtatgcaccctacaagaaaggcagcaagctgagcaaggcccgt
cgtgccaagcagctgggactggagtctgctgcccaggccctgctacagagccctcacact
ctggacctgagagcctgggtcaaacctgggactgaaggtttgtccactgtggaggaggtg
tcgaccggagtggagcagattttggctgatatgattgccaaagacggagagaccctgacc
catataagatcgctatgtgataacagcatggtgatgctccagtcggctgtgtctaagaca
gccctgaaggagcagcagaaagagggtcaccaggggaagcccaaagacattgacaagttc
cacctgtactgtgacttcacctgcaacgtgcagcgtattcaacaccaccagaccctggcc
attaaccgaggggagaatctgaagattctgacagtgaaggtcaacatccctgacagggtg
aagagtgacttctgtaggtggtgtgtcaacgtcagatggagacccaagggttacgctaga
gaggagctgatgaagatcttacgagacgcagtggaggactcgtacaaaagactcttatta
ccactgctcagcagaagctacaggacgaagctgacggttagtgcggagaaggagtccata
gccatgtttgtgcgaaacttgcgccagcgtctgttggtgtgtcctgtgagaggccgtgtc
atcatgggcgtggacccagggttcagacacggctgtaaactggccgtcctctcccctacc
agtcagatattatacacagatgtggtgtacctccatggttcaggtgggaacagagaggca
gacaaactgcgccatctgatgatcagatacagctgtaacatggtggttatcggcaacggc
acagcgtgtcgagagactgaggccttctttgctgacctcatcagccggcgtttcttccag
cctctggacgtgtcatactgcatcaccagcgaggcaggggcatccatctacagtgtgagc
acagaggcagtgaaggaaatgcctgatctggacccgaacctgaggagtgcagtgtccata
gggagaagagttcaggacccgctggctgagctggtgaagattgacccgaaacacatcggt
attggaacctaccagcacgatgtttcccagagctctctgaaggcagccctggatggggtg
gtacaggagtgtgtgagcttcgtgggagtggacatcaacatctgctcagagaccctgatg
agacacgtggcaggtctgaatacagggcgtgcaaagagcatagcagagtggagggagacg
aacgggcccttcatgaacagagatcagctgagactggtgaagggcctgggccctaagagc
taccagcaatgtgccggcttcatcagaatcaaccctcaaaaccatctcaacaaccacagt
gatgtaacagggggtaactcagcccaagcagcccaggagaagcctgcagccaaggggaag
ggaaagaccaaagcctcagctgctgtacctaccctgcccaaccctctggaccagacctgc
atccacccagagtcctacgctgtggccaggagtttcctgtccctggtagggggtagtgtg
gaccaggtgggccggtcagagctcagacagtgtgtggaggccagtgtgaaatgtcaaggt
ctagaggccctggctgaaaccctcaacaccaccccagacacactgcagctcatcatagac
ggactcacccagcctcctggctttgacatccgccaagacttcgagaaggcggacttcaag
cgtggcattgtgtctatgagtgacctgagagagggggtggttctgacgggccgggtggaa
aacgccactctgttcggggccttcgtggacatcggagtgggccgcaacggactgatccat
aagaagtacatcactccagacaagctgccagctgaccagaggagacgcagcctagccctg
ggccccggggagaaggtggaggtcagggtgctcaatgtggaccctcagcggggccgcatt
ggactggacctcatacgggtcctcaaatag
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