Salvelinus fontinalis (brook trout): 129828795
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Entry
129828795 CDS
T11136
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a isoform X1
KO
K19472
homeobox protein SIX2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129828795 (six2a)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
129828795 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
HTH_NDX
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
129828795
NCBI-ProteinID:
XP_055745981
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All DBs
Position
30:21507066..21511562
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AA seq
289 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNTNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDNTSSTPAMLIAS
NSGLQMHGLAPPPGPSAMPVSSHDSVHHHHSLHDTILNPMSSNLVDLGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccaacttttggctttacgcaagagcaagtcgcttgcgtctgcgaggtc
ctccaacagggtggaaacattgaacggctcgggcgctttttgtggtctttacccgcgtgt
gagcacctccacaaaaatgaaagtgttctcaaagctaaagctgtggtcgcattccacaga
ggaaatttcagagagctttataagatccttgagagccaccaattttcccctcacaatcac
ccgaagctgcagcagctgtggctcaaagcgcactacgtcgaggcggagaagctccgaggc
cgccctctcggggctgtgggaaaataccgcgtccgcagaaagttccccctgcctcggtct
atctgggacggcgaggagacaagttactgtttcaaagagaagagccggagcgtactcaga
gaatggtacacacataacccctacccttccccgcgagagaagagggagctcgccgaaggc
accgggttgacaaccacgcaagtcagtaactggttcaaaaacagacggcaaagagaccgc
gcggcagaagctaaggaaaggtacgaggaaaacaacgaaaactccaacaccaacagccac
aacccattgacttcttccatgaatggaaataaaacacttttggggagctcagatgacgac
aaaacgccttcagggactccggataacacctcgtcgactccggctatgctcatcgcttca
aactcggggctgcagatgcacggcctagcgcctccacccgggcctagcgccatgccagtg
tccagccatgactctgtgcaccatcatcactctttgcacgatactatactgaaccctatg
tcgtccaacctggtcgacctcggctcttaa
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