Salvelinus fontinalis (brook trout): 129829065
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Entry
129829065 CDS
T11136
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04020
Calcium signaling pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129829065
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129829065
04082 Neuroactive ligand signaling
129829065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129829065
Ion channels [BR:
sfon04040
]
Ligand-gated channels
Glutamate (ionotropic)
129829065
SSDB
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Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
129829065
NCBI-ProteinID:
XP_055746512
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All DBs
Position
30:complement(33822629..33932839)
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AA seq
1423 aa
AA seq
DB search
MAAPPGQPPSSPRYPPLFLLFLFLSSPPLLLSRPLIPHPSINVAVVFCGSAYQNEVRGHL
SREDFADFPLEVNPVTVLVNDTNPRALLTSLCETMATEKLHGVVFEDDVGSGAGPQVAEV
AQILDFLSTQTALPIVGISGGSTVVIPHKAEGSTFLQMGASLEQQIVCMFKLMEEYDWGD
FVVITSMWPGYETFVDYVRSYTDTSYFLWRLQDILSLEMSVGTSDVRAKRMLQQIDSQVL
LAYCSYEEAQYLFQVAGEVGLLGPGYIWILPSLALGNTESPPPMSFPVGLIGVITDHWRK
SLRQRVREGVAIVAKGADSFRRHQGFLPEGHSDCNTPVTHINNNTLFRHMLNVTWERKDL
TFNSDGYLTNPSMAIVALDRDRLWDKVGTLERGILQVRYPVWPRYGSFLETVSDDRHLTV
ATLEERPFVIVENVDPDTGTCVRNTVPCRRQSNRTESIVGHSEPYTKLCCKGFCIDILKK
LSRTIKFSYDLYLVTNGKHGKMISGIWNGMIGEVFYRKADMAIGSLTINEERSEIIDFSV
PFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNR
SLVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYT
ANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHAHMV
KYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQ
KDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLV
AMGLSLLVFAWEHLLYWKLRKKLDKSPRMDFLLAISRGIYSCFNGVEEPDHPNLANSDLT
TNYAQANMLKMLRTAKDLVNSAQVETSLDHATKTIEHWGRHGGNLPVHIPQQVTTEMVPG
GFSHVTENTHTHLSPEHPLIPQYCTLGVVTSLNRQKGLARPTPLRYTLPARTSSLYDRPL
SVSSLSSPHLDLAGGDPLSSYSQPSTGRLYVEPQHISHPRSPFIPYSELQQPDIYPFSHH
PSAISHPSHTEPSRKNRRSKSLLSGESGGGERRRRREEKTVCLAELRANHLQENNVSPQM
PDSLYAGTVLCPGVEGSVGAWPLPLEELVLAGRQRLHRRPSFLRATWGSERILQPDETPP
TSLDCQSHSALPDLFPCVMADQETPTKLYNPAPLRNNLCYPATSTRQHAYLHIRQDQRKG
NGRKKLRYSNSTHLPTYREAMLGSQGGGGGVGLGGVRRATNLLSRQYSHYLTSYPGLPLY
HGPLDLQAHSQASSNHASPSPGTYPSPSPVCQLLPCGGGFRGQRGLLYQDSLYGAYGANG
AYREDQDPGLEPQRGDASVGLRSEDRSCVTQPWGRVSSLESEV
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctccaggacagccaccttcttctccgcgatatcctcctcttttcctcctc
ttcctcttcctctcctcccctcctctcctcctctcccgccctctcatccctcatccctct
attaacgtggcggtggtgttctgtggctctgcttaccagaatgaggtcaggggtcatttg
agcagagaggacttcgctgattttcccctagaggtgaacccggtcactgttctggttaac
gacaccaaccctcgtgctctgctgacaagtctctgtgaaaccatggcgacagagaaactg
catggggtcgtgttcgaggacgatgtgggatcaggagctggacctcaggtggcagaagtg
gctcagatcctagacttcctgtcgactcagacagctctgcccatcgttggcatcagcgga
ggatctaccgttgtcatacctcacaaggctgagggttccacgtttctccagatgggcgcc
tccctggagcagcagatcgtctgcatgttcaagttgatggaggagtatgactggggagac
tttgtagtaatcaccagcatgtggccgggatacgagacgtttgtagactatgtccgatcc
tacacggacacttcctacttcctgtggaggctacaagatatcctgtctctggagatgtct
gtcggaaccagtgacgtccgagccaaacgcatgttacagcagattgattcccaggtgctc
ctggcctactgttcctatgaagaggcccagtacctgttccaggtagcaggggaggtaggt
ctactggggcctgggtacatctggatcctcccctccctcgcattgggcaacaccgagagc
cctccacctatgagcttccctgtaggactgattggcgtcatcactgaccactggaggaag
agcctgaggcaacgtgtcagagagggagtggccatagtggctaaaggggcggatagtttc
agaaggcatcaagggttccttccagagggacacagcgactgcaacacaccagttacacat
atcaacaacaacacactgttcagacacatgctaaacgtgacatgggagcgtaaggacctg
acgttcaacagtgatggctacctgaccaacccctccatggccatcgtcgcactggacaga
gacagactttgggacaaggtgggtacattagagcggggtatcctccaggtgcgttacccg
gtgtggcctcgctatggcagttttctggagacagtatcagatgaccgccacctgacggta
gccactctggaggagaggcccttcgtcatcgtagaaaatgtggaccccgacacgggcacc
tgcgtacgcaacaccgtgccttgccgacgccagtccaaccgcaccgagagtattgtgggc
cactcggagccctacaccaagctgtgctgtaaggggttctgtatagacattctgaagaag
ctgtctcgcaccattaagttctcctacgacctctacctggtcactaacgggaaacatgga
aagatgatcagtggcatctggaacggcatgatcggagaggtgttctataggaaagcagac
atggccataggttctctcaccataaatgaggagcgttctgagatcatcgacttctccgtg
cccttcgttgagacgggcatcagcgtcatggttgcccgtagcaatgggactgtctccccc
tccgccttccttgagccctatagcccagcggtgtgggtgatgatgtttgtaatgtgcctg
accgtggtcgctgtgactgtattcgtgtttgagtacttcagtcctgtcgggtacaaccga
agcttggtcagtgctaaagcgcccggaggtcctaccttcaccatagggaagtcagtgtgg
ctactgtggggcatcgtgttcaataactcagtccccattgagaaccctaaaggcacaacc
agtaagatcatggtgttggtgtgggccttcttcgctgtcatcttcctggcctcctacact
gccaacttggctgccttcatgatccaggagcagtacatagacactgtgtctggactgtct
gacaagaagttccagaagcctcaggagcactaccctccattccgttttggtacggtccct
aacggcagtacagagaggaacatcagaagtaactaccctgacatgcacgcacacatggtc
aaatacaaccagaaaggagtggaggatgccctcaacagcctcaagacagggaagctggat
gcattcatctatgatgctgcggtgttgaactacatggcagggaaggacgagggctgtaag
cttgtgactatcggctccgggaaagtgtttgccacgacaggctatggcatagccctgcag
aaagattccagatggaaacgacccattgacctggccttgctgcagttcctgggagacggt
gacacccagcgcttggagacggtctggctgtcaggcatctgtcagaatgagaagaacgag
gtgatgagtagtaagctggacatagacaacatggccggggtcttctacatgctgctggtg
gccatggggctcagtctcttggtgtttgcctgggaacatctactctactggaaactacgc
aagaaactagacaagtctcctcgcatggacttcctgctcgctatcagcaggggaatctac
agttgcttcaacggggtggaggaaccagaccaccctaaccttgcaaactcagatctgaca
actaactacgcccaggcaaacatgcttaagatgttacgcactgctaaagacctggtcaac
tctgcccaggtcgagacctcactggaccacgccaccaagaccatagaacactggggtcgc
catggcggcaacctgccagtccacattccgcagcaggtcaccacggaaatggttccagga
gggttttctcatgtcacagagaacacacacacacacctgtcccccgagcaccccctcatc
ccgcaatactgcacgctgggtgtagtgacttctctgaacaggcagaaggggctggcgaga
cccacgccgctacgatacacgctcccggctcgcacttcctccctctacgacagaccactt
tctgtttctagtctcagtagccctcaccttgacctggctgggggggaccccctctcttcc
tactctcaaccctccacaggtaggctgtatgtggagccccagcacatctcccacccccgc
tctcctttcatcccctatagtgagcttcagcagccagacatctaccccttctctcaccac
ccctctgccatctcccatccatcccacacagaaccctccaggaagaataggaggagcaag
agcctcctctcaggggaatcaggaggaggagagaggaggaggcgcagggaggagaagacg
gtgtgtctggctgaactccgggccaaccacctccaggagaacaacgtctcgccccagatg
cccgactccctgtacgcaggaacggtgctctgtcctggggtagaaggctccgttggcgcc
tggccccttcccctggaggagctggttctggcaggcagacagaggctccaccgacggcca
tctttcctccgagccacctgggggagtgagcggattctccagccggacgaaactccgcct
acatcccttgattgccaatcacattctgctttaccagacctgttcccctgcgtcatggcc
gaccaagaaactcccactaaactctacaaccccgcccccctccggaacaacctatgctac
cctgccacctcaactcgccagcatgcgtatctccatataaggcaggaccagaggaaaggg
aacggacgtaagaagctgcggtactcaaactccacccacctgcccacctacagggaggcc
atgctggggagtcagggaggcggagggggggtaggccttgggggggttcggagagccacc
aacctgctcagcagacagtactcccactatctaacctcctaccctgggctgccactctat
catggccccctggacctccaggcccattcccaggcatccagcaaccatgccagccccagc
cccggtacataccctagtcccagcccagtatgccagctcctgccctgtggaggtggcttt
cgaggccagagggggttgctgtaccaggacagtctgtatggagcctatggggccaatgga
gcctaccgagaggaccaggatccgggcttagagccccagagaggagatgcatcagtaggt
ttgaggtctgaggacagatcctgtgtgacccagccctggggacgcgtgtctagtctggag
tcagaggtctga
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