Salvelinus fontinalis (brook trout): 129829139
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Entry
129829139 CDS
T11136
Name
(RefSeq) polycomb group RING finger protein 5-B isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129829139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129829139
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
129829139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-RING_5
Actin_micro
zf-Nse
zf-C3HC4_3
zf-RING_6
zf-rbx1
TRAF3_RING
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
129829139
NCBI-ProteinID:
XP_055746678
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All DBs
Position
30:36040248..36060696
Genome browser
AA seq
235 aa
AA seq
DB search
MTSPRKHLVKDFNHFITCYVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLREKEQQQEIEFWRSRKSKENGEEDGPRSKRSRLD
ADNDDGGDGDYHRSDPQIAICLDCLRSNSLVEENIVRGLMKKFIRCSTRVTVGTIKKFLS
LKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGETDYPMVLEYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaccgagaaagcacctggtcaaggatttcaaccactttatcacatgctacgtg
tgtaaaggatacctgatcaagcccaccacggtgacagagtgcctgcacaccttttgtaaa
agctgcatcgtccaacactttgaagacagcaacgactgccccaaatgtggcatccaagtc
catgaaaccaaccctctagagatgttaaggttggacaacactttagaggaaatcattttc
aaactcgtgcctgggctgagagaaaaggaacaacagcaggagattgagttctggaggagt
cgaaagtcgaaggagaacggagaagaagatggcccccgatcaaagaggtctcggctggat
gccgataatgatgatggtggagatggagactaccacaggagtgaccctcagatagccatc
tgtctggattgtctacgcagcaacagcctggtggaagagaacattgtccggggcttaatg
aagaaatttatacgctgctcgactcgagtgacagtcggaacaatcaagaagtttctcagc
ttgaagttaaagcttccaagttcttatgagctagacgtcctatgcaacggggagatcatg
ggaaaagaccacaccatggagttcatctacatgacgcggtggagacttcgcggtgaaacc
gactacccaatggtactagaatatcgcccacggatagactttggttga
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