KEGG   Salvelinus fontinalis (brook trout): 129829170
Entry
129829170         CDS       T11136                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfon03036]
    129829170
   03400 DNA repair and recombination proteins [BR:sfon03400]
    129829170
Chromosome and associated proteins [BR:sfon03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    129829170
DNA repair and recombination proteins [BR:sfon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129829170
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_2 Sec7-like_HUS HEAT_ECM29 Adaptin_N
Other DBs
NCBI-GeneID: 129829170
NCBI-ProteinID: XP_055746746
LinkDB
Position
30:complement(37833898..37851055)
AA seq 1023 aa
MAADSALLLGLVEEFVLGQQDRKAVDTATELKAGQFTILQLVEALGLHLTSSQPQTRARG
VQLLSNVLQECHGDLTEREVEVLIVFYENRLKDHYVITPHVIQGLKALTKCSVLPPGSAV
SILKSLFQDIHVQSLMLAERACVYNILIQLMESKESELKGLGADFVYGFVQSVDGERDPR
NLLLAFHIARKIVLEGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITQEELVLALRAV
LTGTPRFAEFLLPLIIEKLDSDVQSAKVDSLQTLTACASVYEHKELAQFLPGLWASLRRE
VFQTASERVESAGLAAVGSLTACLSRSVLNSDSEDSLNVFLELVLKDCQHHLCEPDLKLV
WPSAKLLQATSTASYRASHRVAAAVLPSLIEQYNSRTQCAQRRTLLEVLQGFVRPGTSSE
EDESVLLDFRQSLCSIVFSALSESNADLQITSMRVLTALGQQTGLLLESDVELAVDHLTR
LILEEEDPEVSLAVVECAGALARLHPAAFISKMVPRLKEEIFSEPMAQGDSATPSQEHSQ
QAVRQRCVAALAAVSSRPSLVQESTPVLLQVLTSAHTGTGTFSLEEVISVCHSLQKIAEQ
AQDTEETGRVFHDVIPRLLGLALQAALQGSSDHRSPILEETVLSAMVPIISTTCARLQSR
LAGQTASRAVSLFLDGDVSFLPENAFPSQIQLLKAGDSRSQNQMVCLLMGCVCWLPRTVE
VPQMDRLLLELEELSCTCDHPLAYTSAAKCYAGLVNKSPTGEALDSLIDRTLKRISTELD
SASSPVRTQAFTLLLWVSKALLLRYHPLSTALTDKLFSLLSDPELGSLAADGFSLLMSDS
PDVLNRCSHADVRIMYRQRFFAENSTKLVEGFNAVVQEKKSGYLKALSHIVNNLPRQVQL
TELPALLPLLLEALSCPDQGVQVSTLSCLQPVLLDPPSALITQLEVLVGRTLALTTSPTM
KVRIASLRCIHALSRFPEHEIMPFRARVLRALAAPLDDHKRVVRSEAAVARNEWFLLGSP
GGR
NT seq 3072 nt   +upstreamnt  +downstreamnt
atggctgcggatagtgccttgctattgggcttggtagaagaattcgttttgggacaacag
gaccgcaaggctgtagacaccgcaacagaactcaaggctggacagtttactatactgcag
ttggttgaagccttgggtttgcatctgaccagctcccaaccccagacccgagcccgtggt
gtccagctcctctccaatgtcctacaggagtgccatggagaccttacagagagagaagtg
gaagtccttatagtgttttatgagaacagattgaaggaccactatgtcatcacaccacat
gtcatacaggggctgaaagcgctgaccaaatgctcagtgttgccgcctgggtccgcagtg
tccattctgaaatcactattccaggacatccatgtgcagtccctgatgctggcggagcgg
gcgtgtgtttacaacatcctcatccagcttatggaatccaaagagtcagagctgaagggc
ctgggtgcagactttgtctatgggtttgtccagtcagtggatggggagagggacccacgc
aaccttctcctggccttccatatcgctaggaagattgtccttgaaggctatgatcttggt
aaattcacagaggagctgtttgaagtgacatcctgctatttccctatagacttcagccct
cccccgaacgacccccatggcatcacccaggaggagctggtcctggccctgagggccgtg
ctcaccggaacaccacgctttgcagagttcctgctgccactgatcattgagaagctggac
tccgatgttcagagtgccaaggtggactccctgcagaccctgactgcctgtgcttctgtg
tatgaacataaagagctagcccaattcctaccaggcctttgggcctcgctgcgcagagag
gtgtttcagacagctagtgagcgggtggagtccgctggcctagccgccgtcggttccctg
acagcctgtctctcccgctccgtcctcaactccgactctgaagactccctcaatgtcttc
ctggagctggtcctcaaagactgtcagcaccacctgtgtgagccggacctgaagctggtg
tggcccagtgcgaagctgctgcaggccacctctaccgcctcctacagggcgagccacaga
gttgccgccgccgtcctgccgtccctcatagagcaatacaacagccgcacacagtgtgct
cagcggcgcaccctactggaggtgttacagggtttcgtccgtccggggacgtcatcagaa
gaggatgagagtgtgctgttggacttcaggcagtctctgtgcagtatagtgttctctgct
ctgtctgagagcaacgctgacctccagatcacatctatgcgtgtgctcactgcgctgggc
caacagacaggcctgctgttagagtcagatgtggagctggccgttgaccacctcaccagg
ctcatcctggaggaggaagatcctgaagtcagcctggctgtggttgagtgtgcaggggct
ctggctcgcctgcaccctgcagccttcatctctaagatggttccacggctgaaggaggag
atcttctcagagcccatggcacaaggtgacagcgccacgccgtcccaggaacattcccag
caggcagtgcgtcagcgctgtgtggcggcactggctgcggtgtcgtcccggcccagtttg
gttcaggagagcacacctgtcctgctacaggtcctcacctctgcacacactggcactggc
acgttctcattggaagaggtgatctctgtctgccacagtctgcagaagatagcagagcag
gcccaggacactgaagagaccggtcgcgtcttccatgacgtcattcctcgcctgctcgga
ctggcattgcaggcagctttgcagggttcctcagaccatcgtagcccgatactcgaggag
actgtgctatcagccatggtacccatcatcagcaccacctgtgcccgactacagtcccga
ctggctggccaaacagcctcgcgggccgtgtccctcttccttgacggtgatgtttccttc
ctgccagagaacgccttcccctcccagatccagctcctcaaggcaggtgactcgaggagc
cagaaccagatggtgtgcctgctcatgggttgtgtgtgctggctgccacggactgtggag
gtgccccagatggacaggctactgttagagctggaggagctgagctgtacctgtgaccat
cccctcgcctacacgtcagccgccaagtgctacgctggcctggtcaacaagagtcccaca
ggtgaagccctggactctctgatagacaggacgttgaagaggatctccactgagctggac
tctgcatcctccccagtcagaacgcaggcgttcactctgctgctctgggtgtccaaggct
ctcctccttcgctaccaccctctgtccacagccctgactgacaagctcttctccctgctc
agtgacccagagctgggttcgttagcggccgatggattctctctcctgatgagcgactcg
ccggacgtcctgaaccgctgtagccacgccgacgtgcgcatcatgtaccgccagcgcttc
ttcgcggagaactctaccaaactggtcgagggcttcaacgctgtcgtccaagagaagaag
tctggctacctgaaggcactgtctcacatagtgaacaacctacccagacaggtccagctt
actgagctaccagcgctcctgcccctcctgctggaggccctgtcgtgtccggaccagggg
gtgcaggtgtctaccctgtcctgcttgcaacctgtcctcctggaccccccttcagccctc
atcacccagctggaggtgctggtgggacgcactctagcgctcaccaccagcccgaccatg
aaagtgcggatagcctcactgcgctgtatccatgccctctcccgctttccagagcatgag
atcatgcccttccgcgcgagggtgctgcgcgccctggctgcccccctggacgaccacaag
agggtggtgaggagcgaggcggcggtggcccggaatgaatggttccttctggggagtcca
ggaggcaggtga

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