Salvelinus fontinalis (brook trout): 129829171
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Entry
129829171 CDS
T11136
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129829171 (vps35l)
Membrane trafficking [BR:
sfon04131
]
Protein recycling
Others
Retriever complex
129829171 (vps35l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
129829171
NCBI-ProteinID:
XP_055746747
LinkDB
All DBs
Position
30:complement(37805265..37820697)
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AA seq
968 aa
AA seq
DB search
MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASVSESPLTLSQSSSTGDVGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSDKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPIPDSFTADEVNDTAKETCLNWFFKIASIRELIPRLY
VEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLKDSLN
KNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALLTEMM
ERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRSLACA
DPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIKHMTP
DRAFEDAYPQLQSVIKKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVEVCRSIMDVFIK
HQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFEQQLS
FCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFITIPSL
TSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGFLLDF
INNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVQVYISALPLLAAMSQES
YLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGCLAFSLF
GCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHLSDMIQ
RLTLQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggtcgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacatcctcctcttcctcctct
tccagctccgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgctgcagcctctgtcagcgagtcccccctaaccctctcacagagcagctccact
ggggacgtgggtagaggaaagaggagggagaaggaggatgaggttggagtggacttcgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagataaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccataccagactcctttacagctgatgaagtgaatgacacggccaaggag
acctgcctcaactggttcttcaaaattgcctccatcagagaactcatcccacgactatat
gtagaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtgggatccaggagaca
gtgcctcgcctcacggctatgatccgggggataggggaccccctggtggccgtgtatgcc
cgggcctacctctgtaggattgggatggaggtggctcctcacctgaaggacagcctgaac
aagaacttctttgacctgctgggtacgttccgtcagatccacggcgacagtgtccagaac
cagctggtcctgcagagggtggagatccccgtctacctgaccctctactcccccgccatc
cactggatcctgcagtgtgtctcctacagagcaccagaggccctgctaacagagatgatg
gagaggtgcaaaaagcttgggaataatgccctgctgctgaactcggtgatgtgggcgttc
agggcggagtttatcgcgacgagagccaccgacttcatcggcatgatcaaggactgcgac
gaggcaggattccctaagcacctgttgtttggctctctgggccgcagtctggcctgtgct
gaccctcctgaggcagaaaggctgcccatcctcaatgaggcctggaaggtcatcaccaaa
gtgcgaagtccacaggattacatcaactgtgctgagatctgggtggagttcacctgtcgt
cacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaagcacatgacccca
gaccgggcctttgaggatgcctatcctcagcttcagtccgtgataaagaagatcctcacc
tactttcatgacttctctgtcctcttctccatggagcgttttcttcccttcatggacatg
ttccagaaggacagcgtcagggtggaggtgtgtcgctccatcatggacgtcttcatcaaa
caccagcaggagcccactagagatcctgtcatcctcaatgctctactccacgtctgcaag
accatgcacgactctgtcaatgctctgacgctggaggacgagaagagatctctggcctta
ttgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgagcagcagctgagt
ttctgtgtggaggcccgggccaccttctgtaacctggagccagtgctggtgcagctcatc
cacactgtgaaccagctggccatggagacgaggcgtgtgatgagggggagccactcccgc
aagactgctgcttttgtcagggcatgtgctgcatacagcttcatcaccattccctccctc
accagcatcttcagccgccttaacctctatctgctgtctgggcaggtggccctggccaac
cagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtgttgccagaggtg
ccacgcagtatcagtatcgagggcaaactgcgctcttctgagggcttcctgcttgacttc
atcaacaacttcctgtcagcactactagttgtgccggaccaccctgaggcaggggtgttg
ttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggaggacaacagtgac
gccaaggtccaagtctacatcagcgccctgccactactggctgccatgagtcaggagagc
tacctctattccatccccaaagtggactcgaatgaaaccctttatggaggagatcccaag
tttttggcagagatcaacaagttatgtgaaactctgattggacaagtgctggaccacctc
aagaccttgggtagagatgagagtgttcatagacagggttgtctggccttctctctgttt
ggctgcctcctagctcatggggacctacgcaacaacaaactcaaccagctggctgtcaac
ctgtggaatctgagccacaagcagggctactgcaacacacgcacctctgtgcggacacta
gagttcatcaagcaccaggcccagcagcccgacatggctcacctttcagacatgattcaa
cgcctcaccttgcagtccaggacctga
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