Salvelinus fontinalis (brook trout): 129829385
Help
Entry
129829385 CDS
T11136
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03266
Virion - Herpesvirus
sfon04081
Hormone signaling
sfon04145
Phagosome
sfon04148
Efferocytosis
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04517
IgSF CAM signaling
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
129829385
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129829385
04512 ECM-receptor interaction
129829385
04517 IgSF CAM signaling
129829385
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129829385
04148 Efferocytosis
129829385
09144 Cellular community - eukaryotes
04510 Focal adhesion
129829385
09142 Cell motility
04820 Cytoskeleton in muscle cells
129829385
04810 Regulation of actin cytoskeleton
129829385
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129829385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129829385
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129829385
04515 Cell adhesion molecules [BR:
sfon04515
]
129829385
04090 CD molecules [BR:
sfon04090
]
129829385
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129829385
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129829385
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129829385
CD molecules [BR:
sfon04090
]
Proteins
129829385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
129829385
NCBI-ProteinID:
XP_055747027
LinkDB
All DBs
Position
2:complement(83662499..83679272)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFFDRLWIFSALLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKEGLEFPFSTLTVQKDTPLSDKASGAADDVTQIRPQKLRLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGSQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAVSNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEDLALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPEDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVEHFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttttttgaccgactatggatattttctgctttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacgtgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgatctgaagcagaacctgttggatggggggtgtacgaaggaggggctagag
ttccccttcagtaccctcaccgtgcagaaagacacgcccctcagtgacaaggcatcgggg
gcggctgacgacgtcacccagatcagaccccagaaactacgcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgttccctgggc
agccagctggctgcagccatgggtcgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagctgtcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgactaagcaggtggagcgcttcacagaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggttatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgacgctacgacacac
atagccttggacggccggctggctggtctagtgcagcccaatgacggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcatttttgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctcattcctggcaccacagttggaacactgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gagctggagttgctgggtgttccagaggacctggctctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggccaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacccgtgggcttcaaagacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagtcctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccctcagaccaaggcaactgcagccccaaacctgaggaccccatctgc
agtgggaggggcaactgtgtgtgtggccagtgctcctgccacactagtggttttggaaag
gtgtggggcaaatactgcgagtgtgacgacttcaactgccttcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagtatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgcgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccgacctgccctgatgcctgcagcatcaaaaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctttttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcacttccagtactacgaggatgccagtgga
aagtccatcctatatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcactgttcatgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaactcttga
DBGET
integrated database retrieval system