Salvelinus fontinalis (brook trout): 129829615
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Entry
129829615 CDS
T11136
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04514
Cell adhesion molecules
sfon04672
Intestinal immune network for IgA production
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129829615
04514 Cell adhesion molecules
129829615
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129829615
09142 Cell motility
04820 Cytoskeleton in muscle cells
129829615
04810 Regulation of actin cytoskeleton
129829615
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
129829615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129829615
04515 Cell adhesion molecules [BR:
sfon04515
]
129829615
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129829615
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129829615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_2
Integrin_b_cyt
I-EGF_1
EGF_Teneurin
EGF_integrin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
129829615
NCBI-ProteinID:
XP_055747385
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All DBs
Position
31:14445361..14455251
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AA seq
786 aa
AA seq
DB search
MGLLRSSQTMRKVWLTVVVLLIYFTEQRGSMGLDGRCLSKPTCTECLRSLGCAWCKQKGF
LAQGEPNERRCDREEALRKRHCSDGQVLNPQPAIRSRAEEPMGTVVQLEPQNLHLKLRVG
MPQSFEVRFRRAEGYPIDLYYLMDLSFSMKDDLENVRNLGLEVVTAMKNITSAVRIGFGS
FVDKVVDPYVSTVEAKLANPCKEGYKGPCQPAFSFKHVLKLTEDVEEFERKVSKQSISSN
LDGPESGFDAIMQVAVCQDDIGWGNVTRILVYTSDDTFHLAGDGKLAGIYHPNDGKCHLN
SNGLYNKDTVYDYPSVGHLSQVLSANNIRLIFAVTDQHIQNYEALSEMIPQSMVGLLEDD
SSNVVELISEACNNLSSYIVLEHRDVPPGLGVSYSSHCGDDRLAQGQDRGECSDVRINQQ
VNFTVTVTSSSCLSKTESFIIKVQGINEELRVTVETLCDCDCQDSEEQSSQCHGNGTFHC
GICSCDSGYTGQRCECETQPNKDTSLAVEALCSPAQTNSTGTPLCSGRGSCVCGQCICWG
QHRGQHCQCDDISCNRHNNMICGGNGRCDCGNCECFHNYTGPACECSTLTDQCQTSNDGI
CSHRGQCECNECHCHPGFFGSHCTKPLAPCDTYRACVACMLHESAKNLCHHPCGSAKPIR
INGTQSFTCQDDTVRFNVELIINTGDIFVYYTDTPSGIDPWIINMGKTVVGIVLLGVIVI
IIYRLMLEVFYQRERRRFLKDKENIWWEDTQNPLFQEAVTTFTHPMHVLEPDADCATSTF
GKIKQM
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgctcagaagctctcagacaatgagaaaggtgtggctgactgtggtggttctt
ctgatatacttcactgagcagagaggatctatgggcctggatggaagatgcctgtctaag
cccacctgcactgagtgtctgagaagccttggctgtgcctggtgtaaacagaagggtttc
ctggcgcaaggggagccaaacgagcgtcgctgtgacagggaggaggctctgagaaagaga
cactgctctgacggacaggtcctgaacccccagcctgcaatacgtagcagggcagaggag
ccaatggggaccgtggtccagctagagccacagaacctccaccttaagctaagagtcggc
atgccccagtcatttgaggtgaggttcaggcgtgcagagggttatcccatagacctgtac
tacctgatggacctgtctttctccatgaaagatgacctggagaatgttaggaacctggga
ctggaggtggtcactgccatgaagaacatcaccagtgctgtcaggataggctttggttcc
tttgtggataaggtggtggacccctacgtcagtacagtggaggccaaactggccaaccca
tgcaaagaggggtacaagggcccctgccagcctgccttcagcttcaaacatgtactgaag
ctcactgaggacgttgaagagtttgagaggaaggtgagcaagcagagcatctccagtaac
ctagacggcccagagtcaggctttgacgccatcatgcaggtggctgtctgtcaggatgac
attggctggggtaatgtaactcgtatcctggtctacacttcagacgacaccttccacctg
gcaggtgatgggaagcttgctgggatctaccatcctaacgacgggaaatgccacctgaat
agcaatgggctctataataaggacaccgtttatgactatccctcagttggacacctatct
caggtcctatcagccaataacatcaggctgatctttgcagtgacagaccagcacattcaa
aactatgaggcactcagtgagatgatcccccagtcgatggtgggcctcctggaggatgac
tccagcaacgttgttgagctcatctctgaggcctgcaacaacctatcgtcctacatcgtc
ctggagcaccgtgacgtcccaccaggcctgggggtctcctacagctcccactgtggtgat
gacaggctagctcaggggcaggacagaggggagtgcagtgatgtcagaatcaatcaacag
gtcaatttcacagttactgtgaccagctcgagctgtctgtccaagacagagtctttcatc
atcaaagtgcagggtatcaatgaagagctgagggttaccgtggagacgctgtgtgactgt
gactgtcaggactccgaggaacagtcatcccagtgtcatggcaatggaacattccactgt
ggtatctgtagctgtgattcaggatacacaggtcagcgttgtgagtgtgaaacacagccg
aacaaagacaccagtctggccgtagaggccctgtgttcacctgcacagacaaacagcaca
ggcacaccactgtgcagcggccgtgggagctgtgtgtgtggccaatgtatctgctggggc
caacacaggggccaacactgccagtgtgacgacattagctgcaaccgtcacaacaacatg
atctgtggcggtaatgggaggtgtgactgtggtaactgtgagtgtttccataactacaca
ggccctgcatgtgaatgctctaccctcacagatcagtgccagaccagtaacgatggaatc
tgctctcaccgaggacaatgtgaatgtaatgaatgccattgtcaccctggtttctttggc
agccactgcaccaagcccctggcaccatgtgacacataccgggcctgtgttgcttgcatg
ttacatgagtcagccaaaaacctgtgtcaccatccctgtggctctgccaagcctatccgc
atcaatgggactcaatcattcacctgtcaggatgatactgtacgttttaatgtggaactc
atcataaatactggtgacatctttgtctactacacagatactccaagcgggattgaccca
tggattataaacatggggaagacagtggtaggaatcgttttactgggtgtgatcgtgata
ataatctaccggctgatgttagaagtgttctaccagcgggagcgtagaaggttcctgaag
gataaggaaaatatctggtgggaagacactcaaaatccactgttccaagaggccgtgaca
acattcacccaccccatgcatgtgttggagccagatgcagattgtgctacatcaaccttt
gggaaaataaaacaaatgtga
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