Salvelinus fontinalis (brook trout): 129829732
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Entry
129829732 CDS
T11136
Name
(RefSeq) cyclin-T1-like isoform X1
KO
K15188
cyclin T
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129829732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129829732
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
129829732
Brd4/P-TEFb complex
129829732
7SK RNP complex
129829732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
BUR2_N
Motif
Other DBs
NCBI-GeneID:
129829732
NCBI-ProteinID:
XP_055747594
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All DBs
Position
31:complement(18825629..18838892)
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AA seq
697 aa
AA seq
DB search
MAASFPSPSGTNNKWYFTREQIENSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPATLFLAAKVEEQPRKLEHVIKVTHACLNPQDP
SPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQTS
YFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWEYVDNTVTLELL
DELTHDFLQILEKTPSRLKRIRNWKAAGQTVKGGKSKVPEDGDQTDCMMSMISMSSSETT
LASLSNPSSSSSSSSMAPILLELKSTLGSGSDQPNHVELHAPAKVSLSEYRAKHADVLAA
QKRKLENMEASVKREYASAAQALIGQHQRKEKYHRDQQQSSSHHSSSASSDLSSPSPIIL
KIPLEKERGERSSLKMRLPLGTGGGGGHSGGGNRGAGGEQDIKVRIRVPEKVRSAGSGEE
GGKSREGKHRERSHHHHHHHHHHSSSSLSGASVSSSSSHKHSASAAGAVGGSGSKKTPSD
SSRMSSSSSASRKRTHSTESQGSHPSKVSKSSRNSAHQLPALLAVSSAHSLGAQTAEILP
SLGLPSLHQGNFSHSKGDKTDTNGHNAGGGSQSNEYQDTFEMLNSLLSAQGVQPAQPPMF
DYRSQYGEYRYSGGSRGGSRPPPLPAEPPPPLPPLPK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcgttcccttctccttctggaacaaacaacaaatggtacttcacccgagaa
cagatcgagaatagcccatctcgtcgtgcggggcttgatccagacaaggaattatcctac
agacagcaagccgcgaaccttctgcaggacatgggacagcgactcaatgtgtcccagcta
acaattaatactgctattgtgtatatgcaccgattctacatgatccagtccttcaccagg
ttccacagaaatgtgatagctccagcaacactgttcctggctgcaaaggttgaggaacag
ccccgcaagttggagcatgttatcaaggtgacccatgcatgcctcaaccctcaggaccct
tcaccagatgtccgcagtgatgcttacctgcaacaagcccaagacctggtcattcttgag
agcattatactccagaccctggcttttgaaatcaccattgaccacccacatactcatgtt
gtcaagtgcacccagctcgtcagagttgtcccagcgagtaaggatttggcccagacctca
tacttcatggctaccaacagcctacacctgaccacattctgcctgcagtacagcccaccc
atagtggcctgcgtctgcatccacctggcttgcaagtggtccaactgggagatccctgtc
tccacagatggcaagcactggtgggagtatgtggacaatactgtcacccttgagctgctg
gatgagctcactcacgactttctacagatcttggagaagacaccaagccgattaaaacgc
attcgcaactggaaagcggcaggtcagacagtgaagggagggaagtctaaggtgccagag
gacggggaccagacagattgtatgatgagcatgatctccatgtcgtcctctgagaccacg
ctggccagcctctccaacccttcctcttcatcttcttcctcatccatggctcccatacta
ctggagctcaagtcgaccctgggcagtggctccgaccagcccaaccacgtcgagctgcac
gccccagccaaggtgtcactgagtgagtatcgggccaagcacgctgatgtcctggctgct
cagaagaggaagctagagaacatggaggccagcgtgaagagggagtatgcctcggcagcc
caagctctgataggccaacatcagaggaaggagaagtaccaccgtgatcagcagcagtcc
agctcccaccattccagctcagcctcctctgacctcagcagcccctcgcccatcatcctc
aagatccccttggaaaaggagaggggcgagcgcagctccctgaagatgcgcctccctctg
gggactggggggggaggggggcacagtggaggagggaacagaggagccggaggagaacag
gacatcaaagtgagaatccgggtgcctgagaaagtacgcagtgcaggctcgggagaggag
gggggcaagagtagggagggcaagcatcgagaacgctcccaccaccaccatcaccaccac
caccatcattcatcgtcgtctttgagcggtgcttccgtctcttcgtcctcgtcacataaa
cactcagccagtgctgctggagctgtaggaggaagtggtagcaaaaagacccccagtgac
tcatctagaatgagctcctcttcctctgcgtctcgaaagaggacacactccacggagtcc
cagggatcccacccctccaaagtctctaagtcctccaggaactcagcccaccagctacct
gctctgttagctgtctccagtgcacactccctgggggcgcaaactgctgagatcctccca
tccctgggtctcccctccctccaccagggaaacttctctcactccaagggggacaagact
gacactaacggacacaatgcaggcgggggaagccagtcaaatgagtaccaggacacattt
gagatgctgaactctttactgagtgctcagggggtccaacctgctcagcctcccatgttt
gactaccggtctcagtacggggaatacagatacagcggagggtccagggggggctctcga
ccaccacccctgcctgctgaaccgccacctccgctaccccctttaccaaaatga
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