Salvelinus fontinalis (brook trout): 129829836
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Entry
129829836 CDS
T11136
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129829836 (apex2)
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
129829836 (apex2)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
129829836 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
129829836
NCBI-ProteinID:
XP_055747771
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Position
31:22856938..22861270
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AA seq
592 aa
AA seq
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MKIVSWNINGIRTFKGGIKKALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDLREFSSEELQLLDNEGRA
VLTQHRVMCEDTPETVTVINVYCPRADPEKPERKNFKLQFYKLLQSRAEAILEAGSRVII
LGDVNTSHRPIDHCDPDYIDDFDDHPGRKWLNGLLVDDSEGKEYGKNDQEESENTSSKPL
SSGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPE
VEGSDHCPVWGKLCCPLLSSSKLPPFCTRNLPEFAGRQQKLSRFLVKMDQQQPAREACRD
PLPGSQETGETRENLNPLGSAGTSSTGKKRKLAVESGVPKSKKIMTLKAATPKPQGNLLA
FFKPRSMPVAPTREDPVSQCERGEERNEVTPSQPHTFKGGHSAGQDVPSIPGTRTEDPQG
VCMGDNVHEPGSNIQGVNNQNQGKDAALASEATVDPPCLRKGASLGGFWKTVLRGPPPPP
PCKSHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNFFSWVDKGK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataaggactttcaagggcggaattaaaaag
gcgcttgagtcgctggatgctgacatcgtatgtgtacaagagacaaaagtaacaagagac
ctgttggatgagaggactgctattgttgaaggttataactcctatttcagctttagtcgt
ggacgcagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaggagggcttgaccggtctactgaccaccaaccacgaggggaccattggatgctat
ggtgacctgagagagttctccagtgaggagctgcagctcctggacaacgagggaagggct
gttctcacacagcacagagtcatgtgtgaagatacacctgaaaccgttacggttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaaaatttcaaactgcagttc
tacaagctgcttcaaagtcgggctgaagcaattttggaagctgggagccgtgtaatcatc
ttgggagatgtgaatacatcccaccggcccatagatcactgtgacccagattacatagat
gattttgatgatcaccccggcaggaaatggctaaacggtttactggttgatgacagtgaa
ggaaaggagtatggaaaaaacgatcaggaagagtctgagaatacctcatcaaaacccctc
agcagcggtaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttc
acctgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactac
atcttcgcagaccatcccttggttaaaatggggtttgtggcagcagacatcatgccagag
gtggaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcctgtccagc
tccaagctgcctcccttctgtactcgcaacctaccagagttcgctggcaggcagcagaaa
ctctcacgcttcctcgtcaagatggaccaacaacaacctgccagagaggcctgcagggac
ccactaccaggatctcaggagactggggagacccgagagaacctgaatccactgggatca
gcagggaccagctccactggaaagaaacggaagttggcagtggaatctggtgtcccaaag
agcaaaaagattatgacactgaaggctgctaccccaaagccccagggcaacctcctagcc
tttttcaagcccagatccatgcctgttgccccaaccagggaagaccctgtgagtcagtgt
gagaggggagaagagagaaatgaagtgaccccatcacaaccacataccttcaagggagga
cattctgcaggacaagatgtcccttcaattccaggcacgcgcacagaagatccccagggt
gtctgtatgggagacaatgtccatgaaccgggcagcaacatacagggtgtcaataatcaa
aaccaggggaaggatgcagccctggcttcagaggctactgtagaccccccatgtctcagg
aagggggcttcactgggtgggttctggaagacggtcctacgtgggccacccccaccgccc
ccctgtaagtctcatggggaaccctgtgtactccgcacagtcaagaaggcaggtccaaac
atgggcaagcagttctttgtgtgtaaccgccctcagggtcatgcatccaatcctgaggct
cgctgtaacttcttttcctgggtggataaaggaaaatag
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