Salvelinus fontinalis (brook trout): 129830014
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Entry
129830014 CDS
T11136
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129830014 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129830014 (nfascb)
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
L1 family
129830014 (nfascb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Ig_6
C2-set_2
Ig_4
V-set_CD47
Pur_ac_phosph_N
DUF3792
Motif
Other DBs
NCBI-GeneID:
129830014
NCBI-ProteinID:
XP_055748118
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Position
31:29889569..29921692
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AA seq
1187 aa
AA seq
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MGMLARSTLLLLLWQGLSAIDVPLEIRQPPTIIKQSLKDHVVDPRDNMVVECEAKGTPHP
IFSWRRNGKYFNVARDPQASMRRRSGTLDIYAWADPEAYEGEYQCVATNEHGTAYSNKIN
LRISRAPLWPREVLEPVTVSVGLPLVLDCSPPPGPPKPETYWMSKCSSGRPFNWPHQPHP
PVMLPIKQDRRVSMGVNGDLYFSNVYVNDSATDYCCNARFPYKNIIQQKMPITVRVLTTR
MVSEAAPTFLSPAGRSSSQTVLQGEELLLECIAAGVPTPVITWTKDGEELDTTNMKVKNY
NKLLQISKASFENSGEYTCTATNKIGYLEHTITVRIKAAPFWLEKPSNLVLAPEENARLV
CRSDGIPRPSIRWFINGDTIEDATPVPNREVSGDTITFRSVTVANTGVYQCNASNQYGYL
FANAYINVLHATPRILRPRTDLVKVIEGRRAWLDCRYFGSPVPDLRWSKYGLGNLEGNHF
KVHSNGTLQIRGTRMDDQGTYVCIVSNKEGRDENQVKLEVKESTKILKRPDNMRVLRGTD
VRLECKAQHDPTVAITTTWLKNKQFLIIGWRLSLDESTLVITNVNRGDEGNYTCIIKTEM
DKNTASARLVVMDRPDPPTNLQLSDPFERSVRLTWTPGDSNHSPIKEYLVQYDDDDWLPF
KWRNLSTYPGNLNSVILQLSPFIIYEFRVIAINDIGMSKPSRSSANFQTGGAPPDAIPKN
IQGVGTWRNNMMISWEALNNREWNGPHLKYLVWWKRRDSREEWKNATTWWCKYYIYDTDT
FTPYEIKVQAVNDFGMGPESTVIIGYSGEDRPTAAPLNLRVSRIEATKVTVHWDPVARSS
IMGELKEYKVYFWRDSSQLRWLSVSRAMKSKAFPASGPRLSGVLPGLIPYSNYKMYIVVA
NNRYEGHPSNTIEFSTPEGTPSAPRSFRIQQRNLDMIWVDWDTPAEPNGIVTGYILKYQT
VNATQGEELHVEQFPPNTTSFAVRRYDRYTRYRFTIAAQTRIGVGEWYTEESPHYTTEAY
AREQVDLSTQGWVIGVMCAVALFVLILLVVCFIKRSRGGKYPVRDKKEVTLEPVDDKDQE
GSFDYRSLERISRVTTIPYSARREEETKVGRGQTTVDTMMKRTDSDDSLVDYGDGQEIEF
NEDGSFIGQYTGHKERDDRDTEFSESRSQEAHSPMAHSPMSPIYSFA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctggccagatccactctattactactgttatggcaaggactgtctgccatt
gacgtcccactggaaatcagacagccccccaccattataaaacagtcgttgaaggatcat
gtcgtggaccccagagacaacatggtcgttgagtgtgaagccaaaggcacccctcaccca
attttctcatggaggcgtaatgggaagtatttcaatgtggcacgggaccctcaggcctcg
atgaggagacgttcggggacgctggacatctatgcctgggctgacccggaggcttatgag
ggggagtaccagtgtgttgccaccaatgagcatggcactgcatactcaaacaagatcaac
ctacgcatctctagggcccctctgtggcccagagaggtgttggaaccggtaacggtgagt
gttggtcttcctctggtcttggactgcagccctcctccaggccctcccaaacctgagacc
tattggatgagcaagtgttcatcagggagacctttcaactggcctcaccagccccacccc
ccagtcatgctgcctatcaaacaagaccgtagagtgtctatgggggtgaatggagatctc
tacttctctaatgtctacgtcaatgactctgccaccgactactgctgcaacgcacgcttc
ccctacaaaaacatcatccaacagaagatgcctattaccgtaagagtccttacaacccgc
atggtgtctgaggccgctcccaccttcctgtctccagccgggaggtccagctcccagact
gttctgcagggggaggagctgctcctcgagtgcatcgctgctggagttccaacccctgtc
atcacatggaccaaagatggagaggaactggacacgaccaacatgaaggtgaagaactac
aacaagttactgcagatctctaaggcctcttttgagaactctggtgaatacacgtgcact
gccacaaacaagattggatacctggaacacaccatcactgtccggatcaaagcggctccg
ttctggttggaaaagcccagtaacctggtgcttgccccagaggagaatgcacgcttagtg
tgccgctctgacggcatcccccggcccagtatccgttggttcatcaacggagatacaata
gaggatgctactccagtcccaaacagggaggtgtcaggagacacaattaccttccgctct
gtgactgtggcgaacactggtgtttaccagtgcaatgcctctaaccagtatggctacctg
tttgccaatgcctacatcaacgtactgcatgcaacgccacgtatccttaggcctaggact
gatctggtgaaggtcattgagggcagacgcgcctggctagactgccgctattttggctcg
cccgtgcctgatctgcgctggtctaagtatggactgggcaacctggaggggaatcacttt
aaagtacacagcaacgggacactacagatcagaggcacccgtatggatgaccaggggaca
tatgtgtgtattgtcagcaacaaggaaggacgagatgaaaaccaggtcaaactagaggtc
aaagagtccaccaaaattctcaaacgcccagataatatgagagtcctccgggggactgat
gtccggttggagtgtaaggcccaacatgaccccacggtcgccatcaccaccacctggctg
aagaacaaacagttcctcatcataggctggaggctgtcgctggatgaatcaactctggtc
atcacaaacgtcaacagaggagacgagggcaattacacctgcatcatcaagactgagatg
gacaagaacactgcctccgcccgcctggtggtgatggatcgtccagacccccctacaaac
ttgcagttgtcggacccctttgagcgcagcgtcaggcttacctggacccctggagatagc
aatcacagtcctatcaaagaatacctggtgcagtatgatgatgatgactggttacctttc
aagtggagaaacctttccacgtaccccggaaacttgaactctgtcattctgcaactgtca
ccattcattatctatgaatttagggtcattgctatcaatgacattggtatgagtaaaccc
agtcgctcgtcagccaacttccagactggtggagcacctccagacgccatccctaaaaac
atccaaggagtgggaacatggagaaacaacatgatgatcagctgggaggcactaaacaac
agagagtggaacggtccccacctaaagtacttggtgtggtggaaacggagggattccagg
gaggagtggaagaacgctaccacttggtggtgtaaatactacatctatgacacagacacc
ttcacaccatatgagataaaggtccaggctgtcaatgactttgggatgggcccagagtcc
actgtcatcataggctactctggagaagaccgtcccactgctgcccccctcaacctgcgt
gtgtccaggatagaggccactaaggtcaccgtgcactgggaccccgtggctcgcagcagc
atcatgggagaactgaaggaatacaaggtgtacttctggcgagacagtagccagctgagg
tggctgagtgtgagcagggccatgaagtctaaagcctttccagccagcgggccgcgtctc
tctggtgtcctgccgggactcatcccttacagcaactacaagatgtacatagtggtggcc
aacaaccgatacgagggacatcccagtaacaccatagagttctccactccagagggaaca
ccctctgctccaagatccttcagaatccagcagagaaatttggacatgatctgggtggac
tgggacactcctgcagagcccaatggcatcgtcaccggatacatactcaaatatcagaca
gtgaacgcaactcagggggaggaattgcacgttgagcaatttcccccaaacaccaccagt
tttgctgttcgccgatatgatcgctacacccgctatagattcaccatagcagcacagact
agaatcggggtaggagaatggtacacagaggaatcaccccattatacaactgaagcttat
gctcgggagcaggtggacctctccactcagggctgggtaattggagtgatgtgtgctgtg
gctctcttcgtgctcatcctgctggtcgtctgctttatcaaaaggagccgagggggcaaa
tacccagtacgggacaagaaagaagtgacattggagccagtggatgacaaagatcaggag
ggatcatttgactatcggtctctggaaaggataagtcgtgtcaccaccattccctactct
gcccgacgggaggaagagactaaagttggtaggggccagacgacagtagacaccatgatg
aaacggacagatagtgacgacagtctggtggactatggtgatggacaggagattgagttc
aacgaggacggctccttcattggccagtacactggacacaaggagagggatgacagagac
acagagttcagtgagagcaggagccaggaagcccactccccgatggcccactcccccatg
agccccatctattcatttgcataa
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