Salvelinus fontinalis (brook trout): 129830352
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Entry
129830352 CDS
T11136
Name
(RefSeq) aladin-like
KO
K14320
aladin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129830352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129830352
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129830352
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
eIF2A
PD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
129830352
NCBI-ProteinID:
XP_055748844
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Position
31:44284550..44291991
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AA seq
514 aa
AA seq
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MMCSLALFPPPLSGDGETSQYNESNTDPSVWFGDSPALNLYFPRESLKPHSRPESSSKSA
FRDHCETLYTRSAGAWRDAGLSGLLNEIANSSAEVPKWLGVSSSCVLALLRWVSSFHSSL
FPHLTLSSEEMTVEFSQVLDWSDCAVRSFAWHPHTQKCAVALSDDSIKIYNPKSATTPTL
KHRLQRSVAALQWKPLCASALAVACHNCLLVWHVDPTSLSTRPSSGCAQVLSHPGHSPVT
SVAWSPNGPLLVSASPRDTAMLVWDVAVESCVPLHRVGGGGVTYLSWSPDGSRVLAATPS
SLFRVWETRMWTCERWPSLKGRCQSGCWSPDGSRLLFSVQGETVIYALTFTDNPGVPLMM
SGGPKAATVVADLSETTLNTPDGDITVGGEIQSMAWDPRGERLAVLVKGDAEAGRPAMIA
VFKTQISPAFKLLPCGFVQGEAGTEPRLMQFNPNYQHGAQLTVCWSNGKITHVPFCFMSA
GNPQPGLGGSPSVPLSQGRPADYNNQTLYTELIS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgttctttggcactgttccccccaccgctgtccggcgatggagaaacttctcag
tacaacgagtccaacacggatccatccgtctggtttggggattcacctgctctgaatctg
tacttcccgcgagagtcactgaagcctcacagccggccagagagcagcagcaagtcagct
tttagggaccactgtgagacgctgtacacaaggagtgcaggggcttggcgtgatgcaggc
ctgtctggactcctaaatgagatcgccaactccagtgcagaggtgcccaagtggctaggg
gtgagctcgagctgcgtcctggccttgctacgctgggtctcctccttccacagctctctg
tttcctcacctcacattgagcagcgaggaaatgaccgtcgagttttcccaagtgctggac
tggtcggactgtgcagtgcggagctttgcctggcacccacacacacagaagtgtgctgtg
gccctttcagacgattccatcaagatctacaaccccaagagtgctactactcccaccctg
aagcaccgtctgcagcgcagtgtggcggctctgcagtggaagcctctgtgtgcctctgcc
ctggccgtcgcctgtcacaactgcctgcttgtctggcacgtggaccccacctcactctct
accaggccctcctccggctgtgcccaggtcctgtcccacccaggccattcccccgtcacg
tccgtcgcatggtcacctaacggacctctcctggtgtcggcctctcccagggacactgcc
atgctggtgtgggacgtagctgttgagagttgtgtgcctctccaccgtgtgggaggggga
ggagtcacctacctgtcctggtctcccgatggcagtcgcgtgctggcagctacgccctcc
tccctcttcagggtttgggaaaccaggatgtggacttgcgagcggtggcccagtctgaag
ggacgctgtcagtctggctgttggagtcctgatgggagtcggctgctcttcagtgtgcaa
ggagagactgtcatctatgccctgaccttcactgacaacccaggggtgcccttaatgatg
tcaggtgggccaaaggcagcaacagtggtggcagacctgtccgagaccaccttaaataca
cctgacggagatatcacggtcggaggagagatccagtcgatggcgtgggatccgagaggc
gagcgtctagccgtgctcgtcaaaggagacgctgaagcaggccgccctgccatgatcgca
gtgttcaagactcaaatcagccccgcgtttaagcttctgccatgtggttttgtccagggg
gaggccgggactgagcccagactgatgcagtttaaccccaactaccagcatggagcccag
ctcactgtgtgttggtccaatgggaagattacccacgtgcctttctgctttatgagtgct
gggaatccccagcctggcctgggaggcagcccatctgtacccctgtcccagggcagacca
gccgactacaacaaccagactctctacacagaactcatctcctga
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