Salvelinus fontinalis (brook trout): 129830384
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Entry
129830384 CDS
T11136
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129830384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129830384
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Major cadherins
129830384
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
DUF5527
Motif
Other DBs
NCBI-GeneID:
129830384
NCBI-ProteinID:
XP_055748903
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Position
31:45622632..45992649
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AA seq
936 aa
AA seq
DB search
MKTALVLLLASALQQAAFWGTNGDLVSKAPCRPGFSQSSYSVLISRNVLQSQSIIKDTTV
SSRKVRFDDCMENEGVVFQSGDARFSVGTDGSIYTQREVAGLSGPVQFTVTASGPHTHVW
ETTVKLAPMGQATPSPPGNQIRVEQGKGGERKEEEGVKAPPEFQAPPTVIMFPRQREMGS
KGLRRQKRDWVIPPINVPENSRGPFPQMLVSIRSDQDRNISIRYSITGVGADQPPNEVFS
IDPVAGKMFVTKPLDRERRSSYHLRAHAVNMNGERVESPIDLYIYVIDMNDNRPEFKNQV
YNGSVDEGSKPGTFVMHLAAFDNDDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIV
TVAAGLDREKVSQYSIIVQATDMEGNLNFGLSNTATAIISVTDINDNPPELTSRTFSGEV
PENRVNVVVANLTVIDRDQPHSPNWNAVYRIISGDPIGHFTIITDQHTNDGMVTVVKPVD
FEQNRAFMLTVVVNNQAPLASGIQSSLQSTSGVTISVVDINEPPFFPTNPKSIRFEEGVP
AGTSLTTFSASDPDRFMQQSIRYSKLADPADWLSINNTNGQIITTATLDRESIYVKNNVY
EATFLAVDNGSPMASGTGTLQIYLIDVNDNAPSLLPRESQICERINRNAGINITAADTDT
DPNVGPFVFELPTFPASIRRNWTVSRLNGDYARLSLRTQYLEPGVYEVPVIVTDSGNPPL
SNRSVIKVKVCPCDENGDCTLVGAVAAAGLGTGAIIAILICIIILLSMVLVFVLWMKRRE
KERQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVD
ERPIIPESQYPIRPVVPHPGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTVGSV
SSLNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgctctcgttctcttgctggcatcagccttacaacaagccgcgttttggggg
actaacggagacctcgtgtccaaagccccctgcagacccggcttctcgcaaagttcctac
tctgtgctcatttcaaggaatgtactgcaaagccagagcataattaaagataccaccgtg
tcatcgcggaaagtgaggtttgatgactgtatggagaacgagggggtggtctttcagagc
ggtgacgccaggttcagcgttgggaccgatgggtccatctacacccagagagaggtggca
ggcctgagcggaccggtccagttcacggtcactgccagcggtccacacacacacgtgtgg
gagacaacggtcaaactggccccgatggggcaagccacaccctcaccgccaggcaatcag
atcagagtggaacaggggaaaggaggggagaggaaggaggaagagggggtcaaagcacca
ccagagttccaggccccacccaccgtcatcatgtttcccaggcaacgggagatgggctcc
aagggactgcggagacagaagagagactgggtcattccgccaatcaacgtgcctgaaaac
tccagaggtcccttcccacagatgctcgtcagcatccgttcggaccaggaccgtaacatc
tccatccggtacagcatcacgggggtgggagcggaccagccacccaatgaggtgttcagt
atcgaccctgttgccgggaagatgttcgtcaccaaacccctggaccgagagaggagatca
tcctaccatcttcgtgcccatgcagtgaacatgaatggtgagcgggtggagagccccata
gacctgtacatttatgtcatagacatgaacgacaaccggcctgaattcaagaaccaggtc
tacaacggctctgtggacgagggctccaagccaggtacatttgtgatgcacctggcagct
ttcgataacgacgacaacaccacggccaatgggatggtgcgctaccggatcctgtcccag
acgccacacagccccatccccaacatgttcaccatcaacagcgagactggagacatcgtc
accgtggcagcaggcctcgatcgcgagaaagtgtcccagtacagcatcatagtccaggcc
acggacatggagggcaacctaaactttggcctgtccaacacggccaccgccatcatctcg
gtcacagacatcaacgacaacccgccggagctcacttccaggactttttcaggcgaggtc
ccagagaaccgggtcaatgtcgtggttgccaacctgaccgtgatcgaccgggaccagcca
cactcgcccaactggaatgccgtgtacaggatcatcagcggagacccaatcggtcacttc
accatcatcaccgaccaacacaccaacgacggcatggttaccgtagtgaagccggtggac
tttgagcagaacagggccttcatgctgacggtggtggtcaataaccaggccccgctggcc
agtgggatccagtcgtccctccagtccacatccggggtcaccatctccgtggtagacatc
aacgaaccgcccttcttccccactaaccccaagtccatccgctttgaggagggcgtccct
gctggcacgtctctcaccacattctcagccagcgaccctgaccgtttcatgcagcagagc
atcaggtattctaaactggccgacccagctgactggctgtccatcaacaacaccaacggt
cagatcatcaccacggcaaccctggacagagagtccatctacgtcaagaacaacgtttat
gaagccaccttcctcgcagttgacaatggctctcccatggccagcggtacagggaccctc
cagatctatctgatagacgtgaacgacaacgctccgtctctgctgccccgcgagtctcag
atctgcgagcgcatcaaccgcaacgccggcatcaacatcacggctgcagacacagacacg
gaccccaacgtgggccctttcgtcttcgagctgcccacgttccctgctagcatacgacgc
aactggacagtgtcacgtctcaacggtgactatgcccggttgagtttgcggacccagtat
ctggagccgggggtgtatgaggtgcctgtgattgtgaccgactcggggaaccctcccctc
tccaacaggtccgttatcaaggtcaaggtgtgtccgtgcgatgagaacggagactgcacc
ctggtcggggctgtggctgccgctggacttgggactggagccatcattgccattctcatc
tgtatcatcatactgctcagtatggtgctagtgtttgtactgtggatgaagcgcagagag
aaggagagacagaccaaacagctgctgatcgacccggaggacgatgtcagagataacatc
ctgaaatacgacgaggagggagggggagaggaggaccaggactatgacctgagccagctg
cagcagcctgactctctggagcacatcatcagtaagcccccgggggtacggagggtggac
gagcgccccatcatccctgagtcccagtaccccattcgaccggtggtcccccaccctggg
gacatcggggacttcatcaacgagggtctgcgggcggcggacaatgaccccacggcccct
ccctatgactccctcctggtgtttgactacgagggcagcggctctacggtcggctccgtc
agctccctcaactcctccagcacaggggaccaggactacgactacctcaacgactggggc
ccccgcttcaagaagctggccgacatgtacgggggaggggatgacgaatag
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