Salvelinus fontinalis (brook trout): 129830628
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Entry
129830628 CDS
T11136
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129830628
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129830628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129830628
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129830628
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129830628
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
129830628
NCBI-ProteinID:
XP_055749173
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Position
2:87577458..87589310
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AA seq
551 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDAPVDEGGKPKVLYGV
EFTFDADARVAITLYCQAFEEFTNGMAMYNPKGPALVSETVHYKRGVSQHFSLPSFKIDF
TDWKEEDLNFELDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSEDENSDNSNECVVCLSDLRDTIILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGPLSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLHSVSPSIPPAPLYDDINFSGSLVGEGRPLGSPEHSGDGGLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDTQPHTLLSSSPAPTEATAAEDVPESISPDDEDR
LHSGGERQILQDYSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPPS
SLHMEDEQLDP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgattcttagccggagaatcgctggcgttgaggatattgatatccaggcgaat
tctgcatacagatttccaccgaaatcggggaattactttgccagccattttttcatggga
ggggagaaatttgacaccccccatccagagggttacctatttggagaaaacatggatctg
aacttccttggaaataggcctgtacaatttccgtacgtgaccccggcaccccatgagcct
gtgaagaccctgagaagtctggtcaatatcagaaaggactccctgcgcttggtcaggtac
aaagatgacactgatgctccagtagatgaaggagggaagccaaaggttctgtatggtgtg
gagttcacatttgacgctgatgctcgtgtggctatcaccctgtattgccaagcttttgag
gaattcaccaatgggatggcaatgtacaacccaaagggcccagccctggtttctgagact
gtacactataagaggggtgtgagccaacatttctccctgccttctttcaaaatcgatttc
accgactggaaggaggaggatctgaactttgagctggaccggggtgttttccccatggtg
atccaagctgtggtggatgaaggggatgattgcttgggacatgcacatgtgctgctggca
gcctttgagagacatgtggatggcagtttctccgtcaagcctctgaagcagaagcaaatt
gtggatcgtgtgagctacctgctgcaggagatctatggaattgaaaacaaaaacaaccaa
gagaccaagccgtcggaggatgagaacagtgacaacagcaatgagtgtgttgtttgtctg
tcagatctccgagacaccatcatcctgccctgcagacacctgtgtctctgcaactcctgt
gctgacaccctgcgttaccaggccaacaactgtcctatctgcagactgcccttccgagcc
ttgctgcagatcagagctgtgaggaagaagcctgggccgctgtcccctgtctctttcagc
cctgtactggctcagaccatggaccatgatgagcactcgagctcagactcggttccccca
ggctttgagcccatctctctgctggaggccctgaacggcctacactctgtgtccccctcc
atcccccccgcccccctctatgatgatattaacttctctgggagcctggtcggggagggc
cgtccgctgggctccccagaacactccggtgacggtggcctgcagaagggcaaagtcagc
aagtcacctgacagcaccctgaggtcgccctcatcacccatccaagaggaggatgaggag
aagctgtctgaaatgtcggacacccagcctcacacactgctctccagcagccctgctccc
accgaggccactgcagccgaagatgtaccggagtccatctccccagatgatgaggacagg
ctgcactctggaggagagagacagatccttcaggactacagcagtgaacacagcagcctg
accaaaacagagagtgacccgccgggggacttgtctctgccagggtcatcagagtcaaca
gagagcctgaagagtcagagtaccaactgctccagccagcccctcctgtgtccccccagc
agccttcacatggaggatgagcaacttgacccctaa
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