Salvelinus fontinalis (brook trout): 129830734
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Entry
129830734 CDS
T11136
Name
(RefSeq) CLIP-associating protein 2-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129830734
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129830734
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129830734
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
129830734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
Cnd1
TOR1L1_N
ParcG
Arm
IFRD
HEAT_DAAF5
TAN
Motif
Other DBs
NCBI-GeneID:
129830734
NCBI-ProteinID:
XP_055749359
LinkDB
All DBs
Position
32:complement(11931128..12056825)
Genome browser
AA seq
1532 aa
AA seq
DB search
MEEHDNMEYLYQQVLQKDVTRRLQVGQDLIDYLNDPQRSSDVEQDKPRLDKTIDELTGWV
NSSNYKVALLGIDIAGAFVNRLGEHFRGYLGTVVPALVDRLGDSKDQVREQSQNLILRCM
EVAASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTYGAQALRLSKIVPHLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKSGLPAARLQTIYGRFDEALNSGNMALSPTHD
RSFEDDADSADGNPAQAAFKVPKVPKKSAESSAARRPNITGSKIGGASKDGTGGIDEEDF
IKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPVLFNLIPNCA
KVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHLPGEADSLFNSLEPSYQKSLQSSLKS
SGSVTSLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGASPGSLQRSRSDVDVNA
ATVAKQRHVGQVGPVRLTPGSYSSLDDASDKTDGRLRTKQPLTTATSVSQVDSRGRSRTK
MVSQSQRSYESDCTPGSQSATIVGAGSRSGSPGRVLTSTALSTLGSGAQRVLAGSGGRRS
RIPRSQGCSRDSSPTRLSVAPSSVSSIYKATSRGARGSRIPRPSMSQGCSREASRESSRD
TSPVRSFTPLASRHYSRSTGALHTADALGAAGSGYSISQSSHLSSSVSTMRVLTGSDIEE
ALADALLLGDVTSKKKPARRRYENYGMYSDDDANSDASSACSDRSYSSRNGGAIPTYMRQ
TEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKRE
SGSKLYGTAESGISSASFKVFSMFLETLVDFVLVHREDLQDWLFVLLTQLLKKMGADLLG
SVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAVLKYIETLTLQMEPQD
FVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQDGA
TKLLQNHLRITGNTAQAPMGSPLARHTPRSPASWSSPLTSPTNTSQNTSTLGEFDYDTEN
MNSDDIYSSLRGVTEAIQNFSVRSQEDMNEMGGGADQVDGVRTALDNKTSLLNTPLLSSS
PRGSRDLFTDSPFKHSIKDTSLDESDQQTDDSSIDQSELVSELLKELSNHNERVEERKVA
LCDLLKLIRENTLQVCWDEHFKTILLLLLETLGDREHVIRALALRVLREILSRQPWRFKN
YAELTIMKALEAHRDPHKEVARAAEEMAAMLASSISPDQCVKVLSPIIQSADYPINLAAI
KMQTRVIERVPHHGLVTMLPEIVPGLIQGYDNSESSVRKACVFCLVALYAVIGEELKPHL
NQLSGSKLKLLNLYIKRAQSGSSGGEPPPDSL
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcatgacaacatggaatatttatatcagcaggtcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacttaatagactacctgaacgacccgcagaggtcctcc
gatgtagaacaagacaaaccccggctggataaaaccatagatgagctgacgggatgggtc
aactccagcaactacaaggtggcgctattggggatagacattgccggggcgttcgtcaat
cgcctgggggaacactttagaggatacctgggaacagtggtcccagccctagtggacagg
ttgggggacagtaaggaccaggtcagagaacagagtcagaatcttatccttcgctgtatg
gaagtggccgcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aacttccgcagcagagagggggtgtgtctggttctttgcgccacgctcaacacgtatggt
gctcaggcgttgcgtctcagtaagatcgttccccacctctgcactctaactggagaccag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagccgacctgggaaagagtggcctgcctgccgcacggttacagacgatt
tatgggcgttttgatgaagctttgaattctgggaacatggcgcttagccccactcacgac
cgtagctttgaggatgatgcggacagtgcagatgggaaccctgctcaggctgccttcaaa
gtccccaaggtccccaagaagtcggcagagtcctctgctgcacgaagacccaacattacg
ggttccaagatcggaggtgcgtctaaggatggaaccgggggcattgatgaggaagacttc
atcaaagctttcaccgacgtccccacagtacagatctactcatctcgtgacttggaggat
aacctgaataagatcagggagatctgttctgatgacaaacatgactgggaccagagagcc
gctgcaatgaagaagatccgctcgctgattgttgccggggcgacggagtacgagtgtttc
taccaacacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcatcactgtggctcacctgtcgacagtgttgggtaataag
tttgaccatggggccgaggggattcttcctgtcctgttcaacctcatcccgaactgtgcc
aaggttatggccacttcaggggtgtctgctatacgcttcatcatacggcacacacacgta
cccaggctcattcccctgatcaccagtaactgcacctgcaagtctgtggccgtcagaagg
aaatgttttgacttcttggacctgctgctacaggagtggcagacccagactctggagaga
catacagcggtgatggtagccagcattaagaagggaatcgcagatgccgacgcagaggcc
agggtagaggcccgcaaggcttactggggtcttaggaaccatctcccgggggaggcggac
tctctgttcaactcgttagaaccgtcctatcagaagagcctccaatcatctctcaagagt
tctgggagcgtgacgtctcttcctcagagcgaccgctcctcttcctcatcacaggagagc
cttaatcgtcctctgtcatctaaatggtcagctgctcctggaagagtcccggcgggtcat
aagggcggggcgtcgccgggctccctacagcgttcccgtagcgatgtagatgttaatgcg
gcaacggttgctaagcagcggcacgtcgggcaggtggggccagtgagactgacccccggc
tcctactcctcattggatgatgcctcagataaaacagatggtcgtctgaggaccaagcag
cctctcaccacggcaaccagcgtcagccaggtggactcccggggacgcagccgcaccaag
atggtgtcccagtcacaacgttcctacgaatcagattgcacaccaggatctcagtctgct
accatcgttggtgccggcagtcggagtggttccccgggtcgcgtcctgaccagtaccgct
ctgagtacgctgggttctggagcccagagggtcttagctgggtccggggggagacgtagc
cgcatcccacgcagccagggctgctcacgagactcctcccctacacgcctgtctgtcgct
ccctccagtgttagttccatctacaaagcaacgagcagaggagctcggggaagtcgtatt
cctcggcccagtatgagtcagggctgcagtagggaggccagcagagagagcagcagagac
accagccctgtgcgttcctttacacctctggcttcgcgccactactctcgctccaccgga
gctctccacaccgcggacgctttaggggccgcagggtcagggtacagtatcagtcaatcc
agtcatctgtcatcgtctgtcagcaccatgagagtcctcacaggatctgatatagaggag
gccctcgctgacgccctgctgttaggagacgtaacatccaagaagaagccagcgcggcgg
cgctatgagaactatgggatgtattcggatgatgacgctaacagtgacgcgtccagcgcc
tgctcagaccgctcctacagctccaggaacggaggagccatccctacctacatgagacag
actgaggacgtggccgaggtgttgaaccgctgtgccagtgccaactggtcggagaggaag
gaggggcttctgggtctacaggctctactgaagaatcaacgcaccctcagtcgtgtggag
ctgaagaggttgtgtgagatcttcaccaggatgtttgcagacccccacagtaagcgagaa
tccggatctaagctctatggaacggcagaatccggtataagctcagcctctttcaaggtg
ttcagtatgttcttggagaccctagtggactttgttctggtgcacagagaagacctgcag
gactggctgttcgtcctgctcacccagctgctgaagaagatgggagctgacctgctggga
tcagtacaggccaaggtccagagagcactggacatcacacgagagtctttccccaacgac
ctccagttcactatcctcatgaggttcactgtggaccagactcagacgcctaacctcaag
gtgaaggtggctgttctaaagtacattgagaccttgaccttgcagatggagcctcaggac
tttgtaaactccagtgagacacgtctggctgtgtctcgcatcatcacctggaccacagag
cccaagagctccgacgtcaggaaggcggcccagtcggtactgatctccttgttccagttg
aacactcccgagttcaccatgctgctggcagctctgcccaagaccttccaggacggagcc
accaaactgctgcagaaccacctgaggatcaccggcaacactgcacaggccccgatggga
agccccctggcacgccacaccccccgctctcctgccagctggtccagccccctcacctct
cctaccaacacgtcacagaacacatccacactcggtgagtttgactacgacactgagaac
atgaactcagacgacatctacagtagtctgagaggagttacagaggccattcaaaacttc
tccgtccgcagccaggaagacatgaacgaaatggggggtggtgctgaccaggtggatgga
gtccgcactgctctggacaacaagacttctcttctcaacacccccctgctctcctcttct
ccccgggggtcccgagacctctttacagactccccctttaaacacagcatcaaagatact
tcattggacgaatcagaccagcaaactgatgacagcagcattgaccaatcagagctggtg
tctgagctgctgaaggagctgtccaatcacaatgagcgtgtggaggagaggaaggtggcg
ctttgtgatctcttgaagctgattcgagaaaacaccctgcaggtctgctgggacgaacac
ttcaaaaccatcctcctgttactactggagacgctgggggacagagagcatgtgatcagg
gcgttagctctgcgtgttctgagggagattctgagccgtcagccctggaggtttaagaac
tacgctgaactcaccatcatgaaggctctggaggcgcacagggacccacacaaagaggtg
gcgcgagcggcagaggagatggcggccatgttggcgtcgtccatcagtccagatcagtgt
gtcaaggtgttgtctcccatcatccagtcagctgactaccccatcaacctggctgccatc
aagatgcagaccagagtcatagagagggtcccccaccacggactagtcaccatgctaccg
gagatagtccccggactcatacagggttatgacaactcggagagcagtgtgaggaaggcc
tgtgtattctgtctggtggccctctatgcagtcataggggaggagctaaaacctcacctc
aaccaactgtctggcagcaagttgaagttgttgaatctgtacatcaagcgtgcccagtcc
ggctccagtggtggtgagcccccaccggacagcctatag
DBGET
integrated database retrieval system
