Salvelinus fontinalis (brook trout): 129830756
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Entry
129830756 CDS
T11136
Name
(RefSeq) integrin beta-8-like isoform X1
KO
K06591
integrin beta 8
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04514
Cell adhesion molecules
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129830756
04514 Cell adhesion molecules
129830756
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129830756
09142 Cell motility
04820 Cytoskeleton in muscle cells
129830756
04810 Regulation of actin cytoskeleton
129830756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129830756
04515 Cell adhesion molecules [BR:
sfon04515
]
129830756
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129830756
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129830756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
129830756
NCBI-ProteinID:
XP_055749422
LinkDB
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Position
32:12626897..12661502
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AA seq
867 aa
AA seq
DB search
MGGNKKLCTNDHRAFPALLLVSADARYFPVDYRIVSVVACDRSCCCWCLDYKPAPGVDMT
SWLRKYDNPVLLFLLLAANITSGSSRSGESVCSSPPVSSCSECLRRGPRCAWCFQEGFLD
GAEVGERCDLAATLTRRGCGLEFIENPEVMVEVNPTTSRTQVSPGEITLTLRPGAEASVV
VAVQQLERYPVDLYYLVDVSASMQDNLDLLKKVGVALSNRMREHSSDLRLGFGSFVDKNV
SPYINVHPSKINNPCSDYEVKCLPAHGFHHVLSMTSNMSEFTRIIKRQRIAGNMDTPEGG
LDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGLCHLENSVYMK
SSTMDHPSLGLLAEKLLENHIYSLFAVEQLQYQWYEELVRLLPGSNLLFQAPNLIDLVVD
AYKRLLSVVQVSVSVEDREFSRFLVSVSPLCPEGSESHDRSCSNVQPNQTVYFNITIGLL
SCPDDDDEDDVVQVFVRPVGYNESAVINVRSRCRCRRCHDDIAHQSSCGEDTSDTDHNNQ
EVNTHTHLSHTHTSHTHTPELDLEHTHSQERSRQCGAAASGLDCSGRGVCVCERCVCERN
SLGTVYGTYCQMDDYSCPYQHEILCGGRGVCVSGECVCEEGWTGESCGCPVSTATCLLNN
GLLCSGRGRCVCGRCVCDDHQHSGEFCERCPTCHSSCQSHWRCIDCHLSHGLSQRKMGHC
NHTCTPLVGYVNDVTGDVWRQCVHMKDNCRYRFYTELVSGNTQLHINTQPECVSRGRYVG
MFVSVCVLTFLSGLVMIAVLVLLLQRRSLPQGGATDTQYNPTGKDQSYIPTTNEKTTSYW
RNCPLDPDQPMEMYITIPKMPMGEPWQ
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggggggaaataaaaaactatgcaccaacgaccaccgtgcattcccagcgctgcttctt
gttagcgcggacgcaaggtatttcccggttgattatcggatagtgtcagtagtagcctgt
gaccggagctgctgctgctggtgtctcgactacaagcctgctcctggtgtggatatgact
tcctggctacgtaaatacgacaatcctgtgctgctcttcctgcttttggccgctaacatc
accagcgggagctctcgttccggtgagagtgtgtgttcgtctcctcctgtctcatcatgt
tcagagtgcctccgacgcggaccacggtgtgcctggtgctttcaggagggtttcctggat
ggagctgaggtgggagagcgctgtgacctggcagcgaccctgaccaggagagggtgtggc
ctagaattcatagagaatccagaggtcatggtggaggtcaaccctacgaccagcagaacc
caggtttcacctggagagatcacactcacactccgaccaggtgctgaggccagtgtggta
gtagcagtccagcagttagagaggtatcctgttgatctgtactacctggtggatgtatca
gcatccatgcaggacaacctggacctgctgaagaaggtgggcgtggccttgtccaaccgt
atgagagaacattccagtgatctgcgtctggggttcggctcctttgtcgacaaaaacgtc
tctccctacatcaacgtacacccctccaagataaacaacccctgcagtgactacgaggtg
aagtgtcttccagctcatggcttccaccatgttcttagtatgacgtccaacatgtccgag
tttacacgcatcatcaagagacagaggatagcaggcaacatggacacacctgagggaggg
ctggatgctatgctgcaagctactgtatgccagggagaggtgggttggcgtggggaggcc
aagcgtctgttgttgttgatgacagaccagccttctcacctggcgttggacagcagactg
gctggtatagtcacaccccacgacggactctgtcatctggagaacagtgtttatatgaag
agttctaccatggaccatcccagtttaggcctgctggccgagaagcttctagagaaccac
atctattcactctttgccgtggaacaactacaatatcagtggtatgaggagttggtcagg
ttgctaccgggctccaatcttctgttccaggctcccaacctcatagacctggtagtggat
gcatacaagaggttgttgtcagttgtccaggtatctgtgtcagtggaggacagagagttc
agtcgttttctggtcagtgtctctcctctttgtccggaaggatctgaatcccacgaccgc
agctgttccaatgtccagcccaaccagacggtctacttcaacatcaccatcggcctgctg
tcctgtcctgacgatgatgacgaagatgacgtggtccaggtcttcgtcaggcccgtgggt
tacaacgagtcagccgtcatcaacgttcgatcgcgatgtcgctgtcgccgttgccacgac
gacatcgcccaccagtcgtcttgtggcgaggacacctcagacacagatcataataatcaa
gaagtcaacacacacacacacctctcacacacacacacctctcacacacacacaccggag
ttggacctggagcacacacactcccaggagcggtcgcggcagtgtggtgcggcggcatcg
gggctggactgtagcggtcggggagtgtgtgtgtgtgagaggtgtgtgtgtgaaaggaac
agtctggggacggtgtatggaacgtactgtcagatggacgactactcctgcccctaccaa
cacgaaatactgtgtggaggacgaggtgtgtgtgtgtccggtgagtgtgtgtgtgaggag
ggctggacaggggagagctgcgggtgcccggtctccacggcaacctgcctgctcaacaac
gggttgctatgcagtgggcgtggcaggtgtgtgtgtggcaggtgtgtgtgtgatgaccat
caacattctggagagttctgtgagagatgccccacctgccacagctcctgtcagtcacac
tggaggtgtatagactgtcatttgtctcacggtctgtctcagagaaagatggggcattgc
aaccatacctgcaccccattggtgggttacgtcaatgatgtcacaggtgatgtatggaga
cagtgtgttcatatgaaagacaactgccgctatcgcttctacactgaactggtctcagga
aatactcagctacacatcaacacacagcctgagtgtgtatccagagggcggtacgtgggg
atgtttgtcagtgtgtgtgtgttgacattcctctctggcctggtgatgatagctgtactg
gtgttgctgttgcagagacgatccctgccacagggtggcgccaccgacacacaatacaac
cccactggcaaggaccagtcatacatcccaaccaccaatgagaagaccacatcctactgg
aggaactgccccctggaccctgaccagccaatggagatgtatatcactattcccaagatg
cctatgggtgaaccctggcagtga
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