Salvelinus fontinalis (brook trout): 129830799
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Entry
129830799 CDS
T11136
Name
(RefSeq) rho family-interacting cell polarization regulator 2-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129830799
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129830799
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129830799
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
129830799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HR1
HEAT_2
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
129830799
NCBI-ProteinID:
XP_055749509
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All DBs
Position
32:14425215..14496133
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AA seq
1262 aa
AA seq
DB search
MRGWSGAVSRQYIGFSLNKFFRGVSSHVPEIMAAGTHSPGGPNGIIRSQSFAGFSTLQER
RSRCNSFMGNSAVQKKPTSKPKKPHLSGHKASSGSREPKPERVEEVYGALKQGLDEYLEV
HQTGLDKLTSLMKDMKRNSRLGVLYDLDKQIKTIERYMRRLEFHMSKVDELYEAFCIQRR
LREGASKMKQAFSASPSTKATRESMSEVNRRYKEYTENMSTLEGELENMLGEFHIKMKGL
AGFARLCPGDQYEIFMRYGRQRWKLKGKIEVNSRQSWDGEEIVFMPLITDLINIKVTELK
GLATHILVGSVICETKDLFTAMPQVVAVDVNDLGTIKLNLEVTWFPFDVEDLTLSSGNVS
KATALQRRVSVYSQGTPETPTFQDQSLFKWHPSPTQHRLSPTQHRPCPTQHRLSPTQHRL
SPTQHRLSFLHGLRNSLLEKLRRSRSFGDLVSLRPRPKSSLEGYVTESTLPDDVFENGGC
GNAECKRLSFTFSDTSVSSPSLAPGQSNPEITITPPETCPQPQIPNVEVTVRIHADVVEE
AEEGEEEEESRGSSGSVSTSLVSEEAESEWERAESQSNGGSVSLCSERQLSAVSPGGVFP
DHAGPDSDGDEDDSSELLKPVELDTEEPGSLTRQLVRRLTSSDILPEAGVLSWAGEGSRA
FLESSLEETLQSLLLRLESLGQRCRELQDLEQEVMRLEDLLKCRLPGHRSRSSSLSLMVE
SALESFDFLNTSDFDDDDTGDDHALQRSVFFDMEAESIGPGGPHPEARGHLSEALTEDTG
VGNSVAGSPLPLTTGNENLDVAIVIHLQYCDHLIQLLSSGGSPWQRRAQLQKLSAQTQLL
EELGEISTERLGSITSAADVLPGLAERPARMALWSEWSGSGALFHATLDRVLKHMHHCYT
GPLQERHPHTAADTVIRLVVSEMVDRSDLASSPTCHPHSALSQVVFPPSALSQDVVSPSA
LSQDVVSPSALSQDVFPPSALSQDVVSPSALSQDVFPPSALSQDVFPPSALSQDVVSPSA
LSQDVVSPSALSQDVVSPSALSQDVVSPSALSQDVVSPSALSQDVVSPSALSHDVVTVFQ
FHSYVSKHSVEDMEDHLLQVAREAVFAEGLSGGDSERCLKELEEVSHTGLCPRQQTLRAL
ASLLSHQDPQLSEAAAAYITSASSHTPFRSKAVDCYTQALWESGVQTQRSACAALSCLQA
VESLRAVVSLCDSADEELRHVAIETLLTFGEEGRLAYEQLDTMPREMVRLGTRRGNAVTT
AF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggatggagcggcgcagttagcagacaatacataggatttagtttaaataagttt
ttcagaggagtgtcatcccacgtcccagagatcatggcggccggaacgcactcccccggg
ggacccaatgggatcatccggagccagtccttcgccggcttcagcacgctgcaggagaga
cgctcgcggtgtaactcgttcatggggaactctgcagtgcagaagaagcccacgtccaag
cccaagaagccccatctgtcagggcacaaggccagcagcggctcccgggagcccaagccc
gagagggtggaggaggtgtatggggccctaaaacaaggcttggatgagtatctggaggtg
caccagacagggctggacaaactcacctctctgatgaaggatatgaagaggaactccaga
ctgggagtcctgtatgaccttgacaagcaaatcaaaaccatcgagaggtacatgaggcgg
ttggagtttcatatgagcaaggtggatgagctgtatgaggcattctgtatccagcgcagg
ctgagggagggagccagtaagatgaagcaggccttctctgcatctccctccaccaaggcc
accagagagagcatgtcagaggtcaaccgcagatacaaggagtacacagagaatatgagc
acgttagagggggagctggagaacatgctgggggagttccatatcaaaatgaaaggtcta
gctggctttgctcgtctttgtccaggagaccagtatgagatctttatgcggtatgggcgt
cagcgctggaagctgaaggggaagatagaggtgaactccagacagagttgggacggagag
gagattgtcttcatgcccctcatcacagacctcatcaacatcaaggtgacggagctgaag
ggcctggccactcacatcctggtgggcagtgtgatctgtgagaccaaggatctgttcacg
gccatgcctcaggtggtggctgtagacgttaatgacctgggaaccatcaaactcaacctg
gaggtcacatggtttccgttcgatgtggaagacctgaccctgtcttcagggaacgtgagc
aaggccaccgccctacagagacgggtgtctgtctacagccagggcacgccagagacaccc
accttccaggaccagtccttatttaagtggcacccctccccgacccagcatcgcctgtcc
ccgacccagcatcgtccctgcccgacccagcatcgcctgtccccgacccagcatcgcctg
tccccgacccagcatcgcctgtccttcctccacggtctgaggaactccctgttagagaag
ctgagacgcagtcgctcgtttggcgacctggtctccctccgccccaggcccaagtccagc
ctggagggttatgtgactgagtccaccctccctgatgacgtctttgagaacggtgggtgt
ggtaacgccgagtgcaagcgcctctccttcaccttctccgatacttcagtctcctccccc
agcctcgcccccggccagtccaaccccgaaatcaccataacgccccctgagacctgcccc
cagccccaaatccccaacgttgaagtcaccgttcgaatacatgcagacgtagtggaagag
gcagaggaaggtgaggaggaagaggagagtcgcggtagcagcggcagcgtgagtaccagc
ctggtcagtgaggaggcggagtcagagtgggagagggcggagtcccagtctaacggagga
tccgtctctctctgctcagagaggcagttatctgcggtctctcccgggggtgtgtttcca
gaccacgctgggccagacagcgatggagatgaagatgacagctcggagctgctgaagccc
gtagaacttgacactgaagaaccaggcagtttgaccaggcaactggtgaggaggctgaca
tcgtctgacattctgcccgaggcgggggttctgagctgggctggggaggggagcagggcc
ttcctggagagcagcctggaagaaaccctgcagagtctgctactgaggctagagtcactg
ggacaacgctgtagagagctacaggacctggaacaggaagtgatgcgcctggaggaccta
ctcaagtgccgtctcccgggccaccggagcaggtcgtccagcctcagcctgatggttgag
agcgccctggagagcttcgacttcctcaacacctctgactttgacgacgatgacacgggg
gatgaccacgccctccagcgctccgtgttctttgacatggaggcggagagcatcggacct
ggaggcccgcacccagaggccaggggtcacctgagtgaagctctgacggaggacaccggg
gtgggcaacagtgtggccggcagccccctgcctctcaccaccggcaacgagaacctggac
gtggccatcgtcattcacctgcagtactgcgaccatctcatccagctcctgtccagtgga
gggagcccttggcagcgtcgagcccagctccagaagctctcagctcagactcagctgtta
gaggaactgggagagatcagcacagaacgcctggggagcatcacctctgctgctgacgtg
ctccctgggctggcggagcggcctgctcggatggctctgtggtcggagtggagtggttct
ggtgcactgttccacgctacgctggaccgggtgctcaaacacatgcaccactgctacact
ggcccactgcaggagagacacccacacaccgcagctgacacagtgatccggctggtggtg
agtgagatggtggacaggagtgatctggcctcctcccctacctgccacccccattcggcc
ctgtcccaggtcgtgttccccccttcggccctgtcccaggacgtggtctccccttcggcc
ctgtcccaggacgtggtctccccttcggccctgtcccaggacgtgttccccccttcggcc
ctgtcccaggacgtggtctccccttcggccctgtcccaggacgtgttccccccttcggcc
ctgtcccaggacgtgttccccccttcggccctgtcccaggacgtggtctccccttcggcc
ctgtcccaggacgtggtctccccttcggccctgtcccaggacgtggtctccccttcggcc
ctgtcccaggacgtggtctccccttcggccctgtcccaggacgtggtctccccttcggcc
ctgtcccaggacgtggtgtccccttctgccttgtcccatgacgtggtcacagtgtttcag
ttccacagctacgtctcaaagcacagcgtggaggacatggaggatcacctattgcaggtg
gccagagaagctgtgtttgcggagggcctgagtggtggcgactcagagcgttgtctaaag
gaactagaagaggtttcacacaccggcctgtgtccccggcagcagaccctcagggccctg
gcttccctcctctcccaccaagacccccagctcagcgaggctgcagctgcctacataacc
tccgcttcctcacacacaccctttaggtcaaaggcggtggattgctacacacaggccttg
tgggagtctggagttcaaacccaaaggtctgcctgtgctgctcttagctgtctacaggca
gtagagagcctccgggcggtggtatcactgtgtgactcggcagacgaggagctccgccat
gttgccatagaaaccctgctcactttcggtgaggagggtcgtctggcgtatgagcagctg
gacacgatgcccagagagatggtacgactggggacgcggcgagggaacgccgtcaccacc
gccttctga
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