Salvelinus fontinalis (brook trout): 129830830
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Entry
129830830 CDS
T11136
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129830830 (vps50)
Membrane trafficking [BR:
sfon04131
]
Protein recycling
Others
EARP complex
129830830 (vps50)
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GFIT
Other DBs
NCBI-GeneID:
129830830
NCBI-ProteinID:
XP_055749569
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Position
32:18361534..18619569
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AA seq
995 aa
AA seq
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MQKIKSLMARQGLKSPQESIADLSPVEDFRIPSKEEMREMREQPIDPQAEQEIINSIQEV
YYSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSVSKEDFTEASLGLLANQRRRHLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTRVQLAYTLLEKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITQDSYVPCLSDLCKALWEVMLSYHRTMQWHEEDDKEEAPPTTDE
AGAADTEEAVVDHSYVKKKLEHGLTRIWQEVQLKVKAYLLGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQSRSPSVSPSRQVLSSQDQEVLSLFQHFSQEGNPFERHIDNKDEETEDVL
ASNGYESDELEKCVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSASRETLRSRKKSDYSL
NKGSNAPILTNTTLNVIRLVGKYIQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPAPSLCVPGGQGGREAGPARPAAPFCWYESSGPGLISSRLRTTLNRIQESLIQMESLGE
GSSSVHGGPGEDRKEKVPSPHLSQLVVLTASETLYGLAQRVVATESLVFLAEQFEFLQSH
LDTMMPTAKKPFLQQFYSQTVSTASELRKPIYWVVAAKALDYEQMLLLMAGVKWDIREIM
SQHNVYVDVLLKEFEEFNKRLGDVSRHVRVPLPVSNVLWEHCIRLANRTLVEGYGNVKKC
SNEGRALMQLDFQQFLMKLEKLTDMRPIPDKDFVETYIKAYYLTENDMEQFIKNHREYSM
KQLANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagataaagtcacttatggcccggcagggcctgaaaagcccacaggagagcatt
gcagacctcagcccagtggaggacttcaggatccccagcaaggaggagatgagggagatg
agggagcagcccatcgacccccaggcggagcaggagatcattaacagcatccaggaggtc
tactactccaacgactcctttgacatggtgcagcacgagctggagaaactcccacctgag
ctgaacttgcaggagctggaggagtacagagacaagctgaagagacaacaagcagcggtt
tccaaaaaagttgccgatcttatcctggaaaaacagccgtcctacgttaaggagttggag
agggtgacgtcattacaaaccaatctacagctggctgcagtgatctgcaccaatgctagg
aggcaactgagtgtttcaaaggaggacttcaccgaggccagcctggggctcctagccaat
cagaggaggagacacctgctcacagggctgctgaagtcactgaggaccatcaagaccctg
caaaggactgatgttcgactcagtgagatgctggaggaggaggactatcctggtgctatc
cagttatgtctggaatgtcagaaggctgccagcacattcaaacactacagctgcataagt
gagttgaattccaagctacaagacactctggagcaaatagaggagcagctggatgtggcc
ttgtctaaaacctgcaagcactttgacgtctcccactacaccagagttcagctggcgtac
accctcctggaaaagacccagacggccatggaccagctccacatgcacttcacccaggct
atccacaacactgtgttccaggtggttctaggatacgtggagctctgtgctggcaacgcc
gacaccaagtttcagaagatgcagtacaaagacctctgcacgcacatcactcaagacagc
tatgtcccctgcctgagcgacctgtgcaaggcattgtgggaggtgatgctcagctaccac
cggaccatgcagtggcatgaggaggacgacaaggaagaggccccacccaccacagatgaa
gcgggtgctgcagacaccgaggaggcggttgtggaccatagctatgtaaagaagaagctg
gagcatggactcactcgaatctggcaggaagtccagctgaaagtgaaagcctatctgctt
ggtacagacatgtctaacttcaaatatgacgacttcatcgtggtcttggacgttatcagc
aggctgatgcaagtgggggaggagttctgcggcagtaagtcagagttgctgcaggaatcc
atcaaacgtcagagcgtaaactacttcaagaactaccacaggacacgcctggaggagttg
cggatgtttctggagaatgagacgtgggaactgtgtcctgtcaagtctaacttcaacatc
gctcagctccatgagtttaagttcatgggtcagagccggtccccctcagtgtctcccagt
agacaggtgttgtccagccaggaccaggaagtcctgtctctgtttcagcacttcagtcag
gaggggaacccctttgagaggcacatcgacaacaaggatgaggagactgaggacgtactg
gcctccaacgggtatgaatccgatgagctggagaagtgtgtgtaccaggactatgacagc
gacagtgacgtccctgatgaactcaagcaggactacgtggacgagcagaccggagacgtc
cctctcaagagtgcgtcaagggagactctgcgcagcaggaagaagtccgactacagccta
aacaaaggctccaacgctcccatcctgaccaacacaaccctcaacgtgatccgactggtc
gggaaatacatacagatgatgaacattctgaaaccaatagcctttgatgtcatccactgt
gtttcccagctgtttgattactacctgtatgctgtctacaccttcttcggccgcaatgat
atgcctgcccctagcctgtgtgtgcccggcggccaggggggcagggaggctggtccggcc
aggcctgctgcccctttctgctggtatgaatcatcaggtccgggtctgatcagcagccga
ctgagaacaacactgaacagaatccaggagagcctcatccaaatggagtctctgggggaa
ggcagctccagtgtgcacggtggtccgggggaggacaggaaggagaaggtgcccagcccc
cacctcagccagcttgtggtcctgacagccagcgagaccctctacggcctggcccagagg
gtggtcgccacagagtcactggtgtttctggccgagcagtttgagttcttgcagtctcac
ctagacaccatgatgcctacagccaagaagccgttcctccagcagttctactcacagact
gtctccacggccagtgagctacgtaaacccatatactgggtggtggcggccaaggcttta
gactacgaacagatgctgctgctgatggctggagttaagtgggacattagggagataatg
tcacagcacaacgtgtacgtggacgtcctgttgaaggagtttgaagagtttaacaagagg
ctgggtgatgtgtccagacacgtccgggtccctctgcctgtgtctaatgtcctgtgggaa
cactgcatccgtctggccaacaggactctggtggaaggctatggtaacgtgaagaagtgc
agtaacgaagggcgggccctgatgcagctggacttccagcagttcctgatgaagcttgag
aagctgacggacatgagacccatccctgacaaggactttgtggagacctacatcaaggcc
tactacctgactgagaatgacatggagcagttcattaagaaccacagggagtactccatg
aagcagctggccaacctggtaaacgtgtgtctgggctctcacatcaacaagaaggcccgg
cagaaactcctggcggctatcgacgacatcgacagaccaaagagatag
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