Salvelinus fontinalis (brook trout): 129830857
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Entry
129830857 CDS
T11136
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129830857 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129830857 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129830857 (vps28)
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
129830857 (vps28)
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129830857 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
129830857 (vps28)
Exosomal proteins of colorectal cancer cells
129830857 (vps28)
Exosomal proteins of bladder cancer cells
129830857 (vps28)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
129830857
NCBI-ProteinID:
XP_055749634
LinkDB
All DBs
Position
32:19731014..19736217
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AA seq
223 aa
AA seq
DB search
MFHGIPVTGGMGGAPANKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacggaatacctgtcacgggaggtatgggaggagctcctgccaataaacctgaa
ttgtatgaggaagtaaaattgtacaagaatgcaagagaacgagagaagtttgacaacatg
gcagagctgtttgctgtggtgaagacacttcaggccctggagaaagcttacatcaaagac
tgtgtgacccctaatgagtacacggctgcttgctccaggttgctggtgcaatacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgatgacttctgcaggaagtac
agacttgactgcccgctagctatggagagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgcagatatcgtatcgctctttatcactgtg
atggacaagctacgtctggagatccgggccatggatgagatccaaccagacctgagagag
ctgatggagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcagcctctggttgaccactctcagcagcatgtcagcctctgatgagctggacgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaatgccttcaaccgcttctta
cactcctcctaa
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