Salvelinus fontinalis (brook trout): 129830924
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Entry
129830924 CDS
T11136
Symbol
tent4a
Name
(RefSeq) terminal nucleotidyltransferase 4A isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129830924 (tent4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129830924 (tent4a)
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129830924 (tent4a)
Enzymes [BR:
sfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
129830924 (tent4a)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
129830924 (tent4a)
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
129830924 (tent4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF7752
Motif
Other DBs
NCBI-GeneID:
129830924
NCBI-ProteinID:
XP_055749736
LinkDB
All DBs
Position
32:22248225..22264301
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AA seq
810 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMQVWETSQVRANSGQHLHNNQNHNLHLNSPALDVYKHVAA
KGNSMCTNTNAGLSSSSHHGISKGTTSNHGTAFSSFGLTLPNGTVQNSLTPSNAYGVTTD
LGDSKMPQKTGSISSLSSVESITDSTSSNRSLGRISGGNVTGNMNKNAGSVNLFNFSESM
HNNVNQYHHQRHHQHQPQYNFQQNCVKLHPTHPPAPLNNHTHHPGRRKSDNKASTYGMNY
LLSNYGNYVSSGTGTPWKTRKYSPGVDGLHEEVVDFYNFMSPRPEEAAMRKEVVDRIETV
IKELWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWECPPLQQLEQALRKHNVAEPFSIKV
LDKATVPIIKLTDQETEVKVDISFNVETGVKAAFFIKDYTRRYPVLPYMIFVLKQFLLQR
DLNEVFTGGISSYSLILMVISFLQLHPRIDASNPNINLGILLIEFFELYGRHFNYLKTGI
RVKNGGAYMAKDDMMKVMNNGYRPSMLCIEDPLMPGNDVGRSSYGAMQVQQVFDYAYIVL
CHAMSPLARSYPNKDIDSALGRIIKVTQEVIDYREWIMTKWGGRHLARMESQGSLLDQDT
AGCVLGVGVEEQRDSVSPHSADSPMSLSSPHQHSSASSVSSLSGSDNDSDSTPPALPVYP
FQALGMTLPLGLALGKAGINQHHLIMSPGSQACMSLPGALTMHSLPGRQVGIDGHHLPPF
FHMPPPTHHNPHAPSNPQPLSSPHPASHTHQNGPKCQMKGFHNPAVVHSPALANRVHTHP
LAHAHTHSHTQYRNTWRRRKRDSLPVSLSR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggtggcttggattcagcccgagcagaaaggacctgcaaacgcattgtgg
atgcaagtctgggagacttctcaggtacgagcaaactccggccagcatcttcataataat
cagaaccacaacctgcatttgaattctccagcattggacgtttataaacatgttgcggca
aagggcaatagcatgtgcaccaacaccaacgctggtctgagcagcagcagccatcacggt
atttcaaaaggcactacttctaaccacggcactgcgttctcctccttcgggctaacgtta
ccgaacggcaccgtacagaactcattgaccccgtccaacgcttacggggtaacgacagat
ttgggagacagtaaaatgccccaaaagacgggatctatctcgtccttgtcttcggtggaa
tctataacggacagtacatcttcaaaccgctctttgggaaggattagtggtggcaatgta
actggaaatatgaataaaaacgctggcagtgtcaatctgtttaacttcagtgaaagcatg
cataataatgtcaaccaataccaccatcaaaggcaccatcagcatcaacctcagtacaat
ttccaacagaattgtgtgaagcttcacccgactcacccgcctgcacccctaaataaccac
actcaccatccaggccgaaggaaaagtgacaacaaggcgagcacctatgggatgaattac
cttctttctaactatggcaactatgttagttcggggacggggacgccttggaagacgagg
aaatacagccccggtgttgatggtctccatgaggaggtggtggacttctacaacttcatg
tctccccgaccggaggaggctgctatgaggaaggaggtggtcgacaggatcgagactgtc
atcaaggagctgtggcctactgccgacgtgcagatatttggcagcttcagcactggactc
tacctacctacaagtgacatagacctggtggtgtttgggaagtgggaatgcccaccgttg
cagcagttggaacaggccctccggaaacacaacgtggcggaacctttctccatcaaagtg
ctggacaaagctacagtgccaatcatcaagctgactgaccaggagactgaagtcaaagtg
gacatcagcttcaacgtggagactggagtcaaagctgctttctttatcaaggactacact
cggaggtatcccgtgctgccttacatgatctttgtgctgaagcagtttctgctccagaga
gatctcaatgaggtgttcaccggaggaatcagctcttacagcctcatcctgatggtcatc
agcttcctccagctccacccaaggattgatgccagcaaccccaacatcaaccttggcatt
ctgctgattgagttctttgagctttatgggcgccattttaactacctgaagacaggcatc
cgcgtcaagaacggaggggcctacatggccaaggatgatatgatgaaggttatgaacaat
ggctacagaccctccatgctctgtatagaggacccactgatgccaggtaacgacgttggc
aggagttcgtacggagccatgcaagtccagcaggtttttgactacgcttacatcgtcctc
tgtcacgccatgtcaccgctagcacgctcctacccaaacaaggacattgacagcgctttg
ggtaggataatcaaggtgacacaggaagtgattgactacagggagtggatcatgacgaag
tgggggggcaggcacctcgcccgcatggagagccagggttccctcctggatcaggacaca
gcagggtgtgtgttgggtgtaggtgtggaggagcaaagggattctgtgtcccctcacagt
gcagactctcccatgtccctgtccagtcctcaccaacactcctcagcctcctctgtctcc
tcactgtctgggtcagacaacgactctgattcgacacccccggcgctgcccgtctacccc
tttcaggctttgggtatgactctacccctgggcctggcactgggcaaggctggcatcaac
cagcaccacctcatcatgtcccctggctcacaggcgtgtatgtctttgcccggtgccctg
acgatgcactctttacctggcagacaggtgggtatagacgggcaccacctcccccccttt
ttccacatgcccccccctacccaccataacccccatgccccctccaacccccagcctctg
tccagcccccaccctgccagccacacacaccagaacggtcccaagtgtcagatgaaaggc
ttccacaatccagctgtggtccacagtcctgccctggccaaccgtgtacacacccaccct
ctcgcacacgcccacacacactctcacacgcagtaccgcaacacctggcggcgtcggaag
agggacagcttaccagtcagcctgagcagataa
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