Salvelinus fontinalis (brook trout): 129831023
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Entry
129831023 CDS
T11136
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfon03032
]
129831023
03036 Chromosome and associated proteins [BR:
sfon03036
]
129831023
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
129831023
DNA replication proteins [BR:
sfon03032
]
Eukaryotic type
DNA Topoisomerases
129831023
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
129831023
Centrosome formation proteins
Centriole proteins
129831023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
129831023
NCBI-ProteinID:
XP_055749975
LinkDB
All DBs
Position
32:28208522..28257411
Genome browser
AA seq
1650 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAANGRGDGGKPEGGGGGAKKKGGEKM
SVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIFDEI
LVNAADNKQRDKSMSTIKISIDPESNTVTIWNNGKGIPVVEHKDEKMYVPALIFGHLLTS
SNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDPKIKF
FDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVTGFR
SYVDLYVKDKLDEVGVALKVVNESINERWEVCLTMSEKGFQQISFVNSIATTKGGRHIDY
VVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSF
GSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAG
GKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEIN
NIIKIVGLQYKKSYDDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHT
FLEEFITPIVKVNKNKQEHAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAKEYF
ADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGT
QAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVAQLA
GSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFT
MLSPLAKMLFPAMDSSLLKFLFDDNQKVEPEWYIPILPLVLVNGAEGIGTGWACKIPNYD
HREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITELPV
RTWTQAYKESVLEPMLQGTDKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGLHKV
FKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLVGSLGAEASKL
SNQARFVLEKIEGKITIENKSKRDLIRMMVQNGFESDPVAAWTKAQEKALEEDDRDGNDS
DGSVDSVSLSGPNFNYILNMPLWCLSKEKVDELLRQRDSKNGQLNELERKSPEDLWKEDL
AVFIEELDKIEAQEQADMSAGKGTKLVKGKVGKPKVKKLHLEETLPSPYGRRVVPTITQA
MKTDASKKMTKKKKGDADLLMKLEFDDEMGVLGSDGGTGENSLNSSSNTPAPTPAKPKAP
RVKQEKKEPGTPRSRKPPTPKGSSGKKVKKRNPWSEDESKSESDLEDSEPVVIPRDTKSQ
RASAAKPKYTFDFSEEEDGGEEEDDDDAASLPARPCKDDFTASSETKDRYNDHSNDDEDI
FPPPKQTTTTVSPAKKKKEPESIFSSSKSACSSEKSNDSDDLKLDSGEEDKAFSYSSSSV
FDKPVPAKKVKKPSDAAPKPRKAPVPKEPPKQKLDTSVWDSDSDTGSKKPATPLKGKGGG
RKRKQSESEEDDFSPKKTPGKTSKAPTSRKPSKKAAVTPSPMSDDDDVHSNRFSQSGTAS
QDRPCRSSAKKEVKYFAESASDDDQYDMFD
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagtgggggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcagcggcggcggcggcggcgaacggcaggggc
gatgggggcaagcccgagggaggaggtggaggagccaagaagaagggaggagagaagatg
tcagtggagagggtgtaccagaagaagacccagctggaacacatcctactgaggcctgac
acctacatcggctctgtggaacctgtcacccagcaaatgtgggttttcgatgaagacctt
gggatgaatctacgagaaatcacctacgtccctggattatacaaaatctttgatgaaatt
cttgtcaacgcggccgacaacaaacaacgggataagagcatgtcgaccataaagatctcc
attgatcctgagtccaataccgtcaccatctggaacaatggtaaaggcatccccgtggtg
gaacacaaagatgagaagatgtatgttcccgctctcatcttcggacacctcctcacctcc
agtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtacggtgctaaa
ctctgcaatatcttcagcacaaagtttacagtggaaactgcctgtaaagagtacaaacac
agcttcaaacagacctggcagaacaacatggggaagacgagcgaccccaagatcaagttc
tttgacggggacgacttcacgtgcgtgaccttccagccggacctgtccaagttcaagatg
gagaagctggacaaggacatcgtggctctgctcaccaagagggcttacgacattgctggc
tcctgcaagggcgtcaaagtcatgctcaacgggaagaaactccctgtgactgggttccgc
agctatgtggacctgtacgtgaaggacaagctggatgaggtgggcgtagccctaaaggtg
gtcaacgagtccatcaacgagcgttgggaggtgtgtctcaccatgagtgagaagggattc
caacagatcagcttcgtcaacagtatcgccaccaccaagggtggcagacacattgattac
gtggtggaccagatcgtagccaagctgatagaagtggtgaagaagaagaacaaagctggt
gtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaatgcgttgatc
gagaacccgacctttgactcccagaccaaggagaacatgaccctccaaaccaagagcttt
ggttctaagtgtcctctgtctgagaagttcatcagagcggcgactaactgtggcattgtg
gagagtatcctgaactgggtgaagttcaaggcccagacacaactcaacaagaagtgttct
tcagtgaagtacagcaagattaaaggcatccccaagctggacgacgccaacgatgccggt
ggtaaacactcgtctgaatgcactctgatcctgactgagggagactcagccaagtccctg
gccgtctctgggctcggcgtcatcgggcgagatcgctatggtgtcttcccactaagagga
aagatcctgaatgtacgagaggccacacacaaacagatcatggagaacgcagagatcaac
aacatcatcaagatcgtgggtctgcagtacaagaagagctacgacgacccagagtctctg
agatccctacgctacggcaagatcatgatcatgaccgatcaggatcaggatggctcccat
atcaagggtttgctcatcaacttcttccatcacaactggccatccctgctcaaacacacc
ttcctggaggagttcatcacgcccatcgttaaggtgaacaagaataaacaggagcatgct
ttctacagcattccagagtttgacgagtggaagaaacagacggtcaactttaaaacctgg
catataaagtactacaaaggtttgggtaccagcacaagcaaggaggccaaagagtacttt
gcagacatggagaaacaccggatcatgtttagatacgccgggacagaggacgatgctgcc
atcacactggcgttcagtaagaagaagactgacgacaggaaggagtggctcactaacttc
atggaggacaggagacagaggaggatgcacggcctgccagagcaatacctgtacggcacg
caggcgaaacacctctcctacaacgacttcatcaacaaagaacttatcctcttctccaac
tccgacaacgagagatccatcccatccttagtggacggtctgaagccaggccagaggaaa
gtgctgttcacctgtatgaagaggaatgataagagggaggtgaaggtggctcagctggct
ggttcagtagcagagatgtctgcttaccatcacggagagcaatccctgttgatgacgatt
gtgaacttggcccagaactttgtgggcagcaacaacgtcaacatcctgcagccgctgggt
cagtttggtacccgcataaacgggggtaaggatgctgccagcccccgttacatcttcacc
atgctcagtcccctggccaagatgttgttcccagcgatggactccagcctgctgaagttc
ctgttcgatgacaaccaaaaggtggagccagagtggtacatccccatcctccctctggtg
ctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatccccaactacgac
cacagagagatagtcaacaacctgtaccgcatgctcaacatgcaggaccctctgcccatg
ctgcccagctataagaactttaaaggcgtgatccatgagttgggtcagaaccagtacatg
gtcagtggagagatctctgtcctggacaagaacaccattgagatcactgagctgcccgtt
cgcacctggacacaggcctacaaagagtcggtactagagcccatgctccaggggacagac
aagactccagctctgattaatgactataaggagtaccacacggaccaaaccgtcaagttt
gtggtccgcatgtcagaggagaagctggcccaggccgaggctgctggactacacaaagtc
ttcaagctacagtccagcctcacctgcaactccatggtgttgtttgaccacatgggctgt
ctgaagaggtatgactcggtccaggacattctcaaggagttctttgagctgcggttgcac
tactacaagctgaggaaggattggctagtggggagcctgggggcggaggcttccaaactg
tccaatcaggcacgatttgtactggagaagattgaaggaaagatcacaatcgagaacaag
tctaagagggatctgatcaggatgatggtgcagaacggctttgagtcggaccccgtggca
gcatggaccaaagcacaggaaaaggctctggaggaggacgatcgtgacggtaatgacagt
gacggctctgtggactctgtgtcgttgtcgggaccaaacttcaactacatcctcaacatg
cctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagagagacagcaag
aacggacagttgaatgagctggagaggaagtctcctgaggatctgtggaaggaagacctg
gctgtcttcattgaagaactggataaaatcgaggcccaggagcaggcagacatgagtgca
ggtaaaggtaccaagctggtgaagggcaaggtgggcaagcccaaggtgaagaaactccac
ctggaggaaacgttgccatcgccgtacggccgcagggttgtacccaccatcacacaggcc
atgaagactgacgcctccaagaagatgaccaagaagaagaagggtgacgcggacctgttg
atgaagctggagtttgatgatgagatgggagtgctggggtcagacgggggaacaggggag
aactccctcaactcctcctctaatacaccagccccaaccccagccaagcccaaggccccc
cgggtcaaacaggagaagaaggagccaggtactcccagatccaggaaaccccccacacca
aaaggatcgtctggtaagaaggtgaagaaacgtaacccctggtcggaggacgagtccaaa
tcagagagcgacctggaggacagtgaacctgtagtcatcccccgagacaccaagtcacaa
cgggcctcagcggccaagcccaagtacacatttgacttcagtgaagaagaggatggagga
gaggaagaggatgatgatgatgctgcatccttgccagcccggccctgcaaagacgacttc
actgcctcctccgaaactaaagaccgatacaacgaccacagcaatgatgatgaagatatc
ttccccccgcccaaacagaccaccaccaccgtctcaccagcaaagaagaagaaggaacca
gagagtatattctcctcctccaaatcagcctgctcctctgaaaagagcaatgacagtgac
gatctgaagttggacagtggcgaggaagacaaggccttctcatactccagcagctctgtc
ttcgacaaacctgtcccagctaagaaagtgaagaagccttcggatgcagctcccaaaccc
aggaaagcaccagtacccaaagagccaccaaaacagaagttggacacgtccgtttgggac
tccgactcagataccggctccaagaagcctgcaacacccctcaaaggtaaaggcggaggg
aggaagaggaagcagtctgaatctgaagaggatgatttcagtcccaagaagactcctggg
aaaacatccaaagcccctaccagcagaaaaccgtcaaagaaagcagccgtgaccccatcc
cccatgtcagatgatgatgatgtacactccaaccgtttcagccaatccggcacggcatcc
caagaccgaccgtgcagaagcagtgccaagaaggaagtgaagtactttgctgagtcagcg
tcagacgacgatcagtacgacatgttcgactag
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integrated database retrieval system
