Salvelinus fontinalis (brook trout): 129831063
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Entry
129831063 CDS
T11136
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129831063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129831063
03021 Transcription machinery [BR:
sfon03021
]
129831063
03036 Chromosome and associated proteins [BR:
sfon03036
]
129831063
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
ARID
129831063
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129831063
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129831063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129831063
NCBI-ProteinID:
XP_055750054
LinkDB
All DBs
Position
32:complement(30384734..30438598)
Genome browser
AA seq
2313 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHVNKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNGNSSRVNNNNNQNDTGGPEGNNHPGMGHHHQGSFPPPPYGYNQHY
SRGPFHQHGGQQSPGMAAAAGPAVQPGNMMDPYPPNSHEHGYPNHFNNYSPFPNRTSYQG
QGYAMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNIGNLQPTSTPTLNQLLTS
PSSTRTYQNYPQGDYSNQEGASKGAADMASSQYGGGHPGWQQRTHHPPPMSPGNTGPGNT
GPLNRNQPPSPMDQAGKMRGQGYGGVHPYSQQQGQGQGPPPPGAQQGASYPGQGYGPPGA
QRYPMGMQGRTPGGMGGMQYGQQMAGYGQQGPGGYGQQSQGYYGQHGPPPHAGQQQSPYP
QQVHPSQGQPSAQHSQPGAPGPYPQGQGPPQVGPPQIQPPYNQGPQQPGPQQGQAVPQGQ
GPQPSYPQQQGPQGQGQQPPQQQLPSQQQGPPQQQERAAPPQAQPPPGHQQPPGHQPSPG
HQPPPSHGGQQPPTGHQPSPGPQGHHPSPGHSGPPQQQGQSQQGQPSPYSQTPPLQQSPF
QRFPPPPQELSQDSFSSQSSAPPSNQPMTSTKSGAEDSMQGRPSSLPDLSGSIDDLPTGT
EGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRSGP
LSPAAVPGIQMPARPPSAHSDSIHSSMNQSAMGQDRVYMRNPQMPPYGSPQQPGSALSPR
QSSGGQMHPGMGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMNPMP
GQAGGAPYAGMPPGRMGPGQMGARPYGPGMGPNMGPGMPPQVTSGMCPPPGMNRKVPGGP
PDAASAMHHGGPGANSIHNRPPGYPPNMSQGMMGSGSPYGPGPGAINSMQGMLNQGGPYG
GGPMGGNMANNTPGIVPSPEFGIDVKLNPAQKMNNKVDGTPKPETKKVKKKSNSSTTTNE
KITRLYELGPEPERRTWVDRYLAFTEEKATGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQ
VNKNKKWRELSTNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDLFIDAKKTTQ
PKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPMPGVRLQDPFAD
GGDPAFARRNSMTPNSYQPGMGGPEMMGRMGPYEPNKDPFGGMRKAGEQFMTPALGPNSG
MEGQFNRGPPGPMGPNMQMGQRQQYPYVPGYDRRQEPGMGPDGSMGPGAPQPNLMPSGAD
SGMYSPSRPPPVQRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYKRSPGDGAYGPP
AKRHEGDGMYNVPFSGQQQPGPQPSGAPQGQQDMYNQYNTGYPGSDRRPPGPQGQFPFPF
GRDRGPSSGVPNSQSPMPPQMMGSPMQAAPDGPQCPMWQGRNEMGYPNYPNRQGPPQGYH
GMNRSEEMMPGADQRINHEGQWPGHPSQRQPPYGPGGSGPPMSRPLQSNYQSSQNHISQV
SSPAPMPRPMESRTSPSKSSYMHSSIKMQKAGPPVPASHIGQAPVQPPLIRRDISFPPGS
VEASQPILKPRGRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFN
LSQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPHAADEDCSDEELPEQEDM
EEEEEEEEEDEEEEEEERKSNADTTTSSQQVQVKQEGVGKEEKSTTEKLTAEEEREGGES
SSSSPAPQDSSLPQEKPKQASKFDKLPIKMVRKKDPFPGCRSSKLGRRQSFDSGLIHWSI
GGGDTTEHIQTHFESRSNLLKQRKRVPPSVTESRKKVSVTVSEHPEKTKPGKEQTTSPAE
KTTKTSAPTTPAPVTATIDDVLSARPGSVTEEAVRGAAEEQKENGGKFLFSIRQAQQSRR
NITILEDEPHSKDETPLSTLSDWQDALARRCICVSNIVRSLSFIPGNDLEMSKHPGLLLL
LGRLVLLHHRHPERKQAPVTYEKEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLD
LSIYPESICLPLLDGLLHWAVCPSAEALDPFPMLGPHGALSPQRLVLETLSKLSIQDNNV
DLILATPPFSRLEKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIAVQKASV
GNLLGFLEDSLAATQYQQSQSSMMHLQGAHFEPTSVDMMRRAARALHAMAKVEENHSEFT
LYESRLLDISVSPLMNSLVSHVICDVLFLIGQS
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgtaaataaa
gaaccgggatctgacaacggatctccgggacagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaacgggaattcgtccagg
gtgaataataataacaaccagaatgatactgggggaccggaggggaataaccaccccggg
atgggccatcaccatcagggctcattccctccacctccttacggttacaaccagcactac
agccggggcccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcg
gggccggcagtgcagccaggtaacatgatggacccatacccgcccaactcacacgagcac
ggctaccccaaccattttaacaactacagccccttcccgaaccggacttcttatcagggc
caaggatacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagcca
ggcaagcaacagccagcaggcggaactacagctatggctgcctcgtacaataatcagagg
tataacataggaaacctacaacccacgtctaccccgactttaaatcagctcctaacgtct
cccagctcaacgaggacctaccagaattacccacaaggagactatagtaaccaggaaggg
gctagcaagggagcagcagatatggccagcagtcagtatggtgggggccatccgggttgg
caacaaaggacccaccatccgcctccaatgagcccagggaacacgggacctgggaacacg
ggacctctgaacagaaaccagcctcccagccctatggaccaggcagggaagatgcgaggc
cagggatacggtggagtccacccctactctcagcagcaaggacaggggcagggccctcct
cctccaggggctcaacagggtgcctcctacccaggccagggctacggacccccaggggct
cagagatacccaatgggcatgcagggacgcacccccggcggcatgggtggcatgcaatac
ggacaacagatggccggctatgggcagcagggtccagggggctacggtcagcagagccag
ggctactacggccagcatggccccccaccacacgctggtcagcagcagtccccctacccc
cagcaggtccacccctcacagggtcagccctcagcccaacacagccagcctggggccccc
ggcccctatccccagggccaagggcctccgcaggtgggtccacctcagatccagccgccc
tacaaccagggaccgcagcagccgggtccccagcagggccaggccgtgcctcagggtcag
ggcccccagcccagctaccctcagcagcaaggaccccaagggcaagggcagcagcctcca
cagcagcagctcccctcgcagcagcaaggacccccccagcagcaagaaagggcggcccct
ccacaggcccagccacccccgggccatcaacaacccccaggccaccaaccctctccaggc
caccagccaccccctagccatggtgggcagcagccacccacaggccatcagccctcccca
ggcccccagggccaccacccttctccaggtcacagtggacccccccagcagcagggtcag
tctcagcagggccagccctcaccctactcccagaccccacccctgcagcagtcgcccttc
cagcggtttccacctccgccgcaggagctctcccaggactcgttcagctcccagtccagt
gctcccccctccaaccagcccatgacttccacaaagagtggagcagaggacagcatgcag
ggacggccttctagcttaccggacctctctggttctatagatgacctgccgacgggtacg
gagggagctctgagtccgggcgtcagcacgtcgggggtgtccagtagccagggggaacag
agtaaccccgcccagtcacccttctcaccccacacctcgccccacttgcctggcatccgc
gggccctccccctcccccgtgggctcccctgccagcgtgaccccctcccgctctggaccc
ctgtcacctgctgccgtgccaggtatccagatgcctgcccggccacccagcgcccattca
gacagcatccactcatccatgaaccagtcagccatgggccaggacagggtgtacatgcgt
aacccccagatgcctccgtacgggtcgccgcagcaacctggctccgccttatccccccgc
cagtcgtcgggaggccagatgcatcctgggatggggccctaccctcagaacaactccatg
gggaactacggccctcagggcggacagtacggaccacaaggctaccccagacagcctggc
tacagtggcatgcccaacgccaactaccctggaggtccaggaggcatgaaccctatgcca
ggccaggctggtggggcgccgtacgcaggcatgccccccggcaggatgggtccaggtcag
atgggtgctcgcccctacggccctgggatgggccccaatatgggccctggcatgccccca
caggtgacctctgggatgtgtccccctccaggcatgaacaggaaggtccccgggggccct
ccggatgcagcctccgccatgcaccacggtggccccggagccaactctatacataacagg
cctccaggctacccccccaacatgtcccaggggatgatgggatcagggtctccgtacggc
ccggggccgggggccatcaacagcatgcagggcatgttgaaccagggaggaccctatgga
ggagggcccatgggggggaacatggccaacaacacacctggcattgttcctagccctgag
tttggcatcgatgtcaaactgaacccagcccagaagatgaacaacaaggtggacggcacg
cccaaacctgaaaccaagaaggtaaagaagaagtcaaactcttcgacgacgaccaatgag
aagataacccgtctgtatgagctgggtccagagccggagaggaggacgtgggtagaccgg
tacctggcgttcactgaggagaaggccacgggcatgaccaaccttcccgccgtgggacgc
aaacctctggacctcttcagactttacgtctcggtcaaagagataggaggcctcacacag
gtgaacaagaataagaagtggagggagttgtccaccaacctgaacgtgggcacgtccagc
agcgccgccagctccctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaag
atcgaacgtggcgaggacccgcccccggatctcttcatcgacgccaaaaagaccacccag
cccaagatccagccccccagcccagctgggtctggatctctgcagggcccccagacgccc
cagtccaccagtagttccatggcggaggggggggacctgaagccccccaccccagcctcc
acccctcacagccagataccccccatgccaggagtcaggctgcaggacccgtttgcagac
gggggcgacccggcgtttgccagacggaactctatgacccctaacagctaccagcctggg
atgggtggtccggagatgatggggcgcatggggccctatgaacccaacaaggaccccttt
ggtggcatgaggaaagctggagagcagttcatgactccagcgttgggccctaacagtggt
atggaggggcagttcaacagaggccccccagggcccatgggccccaacatgcagatgggt
cagagacaacagtacccctatgtacctggatatgacaggagacaggaaccagggatgggt
cctgacggcagtatgggtcctggtgctccccagcccaacctgatgccttcaggggccgat
tcggggatgtactcccccagccgacccccaccggtgcaacggcatgattcctatggtaat
cagtatcctggccaaggagcgccacctggtggcccctaccccaatcagcagccaggaatg
tttccacagcaacaaccgaactataagcgttctccaggcgacggggcctacggtccccca
gcgaagcgtcatgagggggatgggatgtacaatgtccccttcagcggtcagcagcagcca
gggccccagccctctggagccccccagggccaacaggacatgtacaatcagtacaacaca
ggttaccccggctccgaccgccgaccacctggaccccagggccagttccccttccccttc
ggccgagaccgggggccctctagcggtgtcccaaactcccagtcccccatgcctccccaa
atgatgggcagcccaatgcaggcggcccctgacggccctcagtgtcccatgtggcaggga
cgcaacgagatgggctaccccaactaccccaaccgccaggggccaccccaggggtaccac
ggcatgaaccggtctgaggagatgatgccaggggcagaccagcggattaaccacgagggc
cagtggccgggacaccccagccagagacaacccccctacgggccggggggctcgggtccc
cctatgtccagacctctgcagtccaactatcagagctcccagaaccacatatcccaggtg
tccagtcctgcccccatgccccgccccatggagagccggacgtcaccctccaagtcatcc
tacatgcactcaagcatcaagatgcagaaggcggggccccccgtgcctgcgtcccacata
ggccaggcccctgtgcagccccctctcatcaggcgggacatatccttccccccagggtcg
gtggaggcctcccaacccatcctcaaacccagaggaagactcaccatgaaagacatcggc
accccagaggcctggagagtgatgatgtcactgaagtcaggcttactagctgagagcact
tgggccttggacaccattaatattctactgtacgatgacaacagcatttctactttcaac
ctctcccagctgcctgggttcctggagctggtagtggagtatttcagacgctgcctcatc
gagatctttggcatcctgaaggagtatgaggtgggagaccctggccagaggacgctcatc
gacccgcatgctgccgacgaagactgctctgacgaagagctacctgagcaggaggacatg
gaggaggaggaggaggaagaagaagaggacgaggaggaggaggaggaggagaggaaaagc
aacgcagacaccaccacctcgtcgcagcaggtccaggtgaaacaggagggggtggggaaa
gaggagaaatccacaacggagaagttgacagcagaggaggaaagggaaggaggagagtct
tcttcctcctccccagcccctcaggactctagcctcccccaggagaaacccaaacaggcc
agtaagttcgacaagctgcccatcaagatggtgcgtaagaaagaccccttccccggttgc
cgttccagtaaactaggccggcggcagagctttgacagcggactgatccactggagtatc
ggcgggggggacaccacggaacacatccagacccacttcgagagccggtccaacctcctc
aagcagcggaaacgggtgccgccgtcagtcaccgagagcaggaagaaggtttccgtgact
gtgtcagaacaccctgagaagaccaagcctggcaaggagcagaccacctcccctgcagag
aagaccaccaagacctccgccccaaccacacctgccccggtcaccgccaccattgacgac
gtcctgtcggcccggccgggctcagtgacggaggaggcggtgcgaggagcagccgaggag
cagaaggagaacgggggaaagttcctgttctccatccgccaggcgcagcagagccgacgt
aacatcaccatcctggaggacgagcctcacagcaaggacgagaccccactgagcacgctg
tcggactggcaggatgccctggcccgccgctgcatctgcgtctccaacattgttcgatcg
ctctccttcatccccggcaacgacctggagatgtccaaacacccagggctgctgctgctg
ctgggccgtctggtcctgctccaccaccgtcacccagagaggaaacaggcccccgtcacc
tacgagaaggaggaggacgagggtgtgagctgtgagagggacgaatggtggtgggactgt
ctggaggtcctcagggagaactgcctggtcactctggctaacatctccggccagctggac
ctgtccatctacccagagagcatctgtctgcccctgctggatggcctgctccactgggct
gtttgtccctcagccgaggctttggaccccttccccatgctggggccccacggggcccta
tccccccagagactggtgctggagaccctcagcaagttgagcatccaggacaacaacgtg
gaccttatcctggccacaccgccattcagcaggctggagaagctgtacgggacgctggtg
cgtctggttggggagaggaaggtggctgtctgcagggagatgtctgtggtcttactggcc
aacctggcccagggagacagcatggcggccagggccatcgccgtgcagaaggccagcgta
ggtaacctcctgggcttcctggaggacagtctagcagccacgcagtaccagcagagccag
agttccatgatgcacctacagggggctcactttgagcccaccagtgtggacatgatgcgg
cgtgcggcccgcgccctgcacgccatggctaaggtggaggagaaccactcagagttcacc
ctgtatgagtcccgcctactggacatctctgtctcaccactcatgaactctctggtgtcc
catgtgatctgtgacgtactctttctgattggccagtcatga
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integrated database retrieval system
