Salvelinus fontinalis (brook trout): 129831085
Help
Entry
129831085 CDS
T11136
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129831085
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129831085
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
129831085
Protein phosphatases and associated proteins [BR:
sfon01009
]
HAD phosphatases
Fcp/Scp phosphatases
129831085
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129831085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
Biotin_lipoyl
BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
129831085
NCBI-ProteinID:
XP_055750088
LinkDB
All DBs
Position
32:31779852..31954380
Genome browser
AA seq
997 aa
AA seq
DB search
MEEPADSVGGGAAQGPTAQVAEIRCPMAARPMRLLEWKVKPGSLVNVDSVLALCVPIPLE
KEAGSQPPEHPKRLPEKKLKSDRAGVVKDLCCLLGQVISPGGVIVRVEECCHPVVMKGLC
AECGQDLTQMQSNNGRQQAHISTANVSMVHSVPELMVSSEQAEQLGREDQQRLHRNKKLV
LMVDLDQTLIHTTEHHCQRMSNKGIFHFQLGRGEPMLHTRLRPNCKDFLEKIAQLYELHV
FTFGSRLYAHTIAGFLDPEMKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDR
EDVWKFAPNLITVKKYIYFQGTGDINAPPGSKEAQQARKAGSQASRPAEASGAAVTSGPT
AYGGSSASEELSNGCKKQRAKDHNNGGRVESTAPSATQKAAANERTQPGKAVEKGQGVGA
EASTAAQVSDRTNVKEAVQGEEEDGSRTVGSGEEAPPTSSTPPDLHEPNSNLDFDLSSDS
DSVTCKPPSSDSEGEYSQTRKSKEEVAEQAALEEPSGSPGGKEEGGIKQKRTGENSSEVG
GETSVLVLPPEQGNGRSERRKAEPESQNSEQSGVTMEEVDKDNHLIYLQEVLERIHREYY
ARYNAFLGKERPETPDIRKIVPELKARSLEGTTIVFSGLYPTNYPMERTRENYHAKALGA
KMGKDLLLSSKDPGRTTHLIAARAGTEKVRQAQGCKRLHVVNPDWLWGCLERWERVDESL
YPLKEDYTKTQRSNSPATFPDHQGSFQNPLLPPAPLHLPPPAAPEVRTYDPVTGKLIRRG
LHASRPPSYLQASMSAAHGDQTSLRGGQKDQQGETSGPSSRDEEQPGPSCRRRERQPSMS
ETNPLYTFCKEDLDSMDKEVDDMLDEESDEEGEGRGKKTMEEVEGQRPKGSGQSTEEEKH
HQRHQLKQHHHQLQQQGLATVEEETEKTQTPTSDQGGTTTADSVPRGQKRKLAEAKEEEE
GESADESTKDSNEEEEGSSSEADEMAAALDAELNDFI
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccgctgactccgtcggtggcggggcagcacagggccccaccgcgcaagtg
gcagagatccgctgcccaatggcagcgcgtcctatgcggctgctggaatggaaagtcaaa
ccagggtccctcgtcaatgtggactctgtgttggcgttatgtgttcccatcccgctggag
aaagaggccgggtctcagccgccagaacatcccaaaaggctgccagagaagaaactgaaa
tcggaccgagctggagtggtgaaggacctatgttgtctacttggacaagtcatatcgcct
gggggtgtgattgtcagagtagaagaatgctgccatccagtcgtgatgaaggggctgtgt
gctgaatgtggtcaggacctcacacagatgcagagtaataatgggaggcagcaggctcac
atctccacggcaaacgtttccatggtgcacagtgtccccgagttgatggtcagctctgag
caagcggagcagctgggcagagaggaccagcagagactccacaggaacaagaagctggtt
cttatggttgatttggaccaaaccctgatccacaccaccgagcatcactgccagcgcatg
tccaataagggaatcttccacttccagctggggcggggggagcccatgttacacacgcga
ctgcgtccgaactgcaaagacttcctggagaaaatcgcccagctctacgagctgcatgtc
ttcactttcggaagccgcctctatgcacacaccatcgcaggcttcctggaccctgagatg
aagctgttctcccacaggatcctgtccagagacgaatgcatcgaccccttctccaagaca
gggaacctgaggaatctgttcccgtgtggagattcgatggtatgtattatagatgaccgg
gaggacgtgtggaagtttgctcccaacctgatcactgtgaagaagtacatctacttccag
ggcacaggagatatcaacgctccgcccgggtctaaagaggcccagcaggcaaggaaagcc
ggcagccaggccagccgaccggcagaggcctcgggagcagcagtaacgtcagggcctaca
gcgtatggggggtcgtctgcgtcagaggagctgagtaacggctgtaagaaacagcgggct
aaagaccacaacaacggagggagggtggagtcaacagccccctcagccactcagaaagca
gcagccaatgaacggactcaaccgggcaaggctgtggagaagggtcagggcgtgggggcc
gaggccagcacggcagcacaggtgagcgacaggacgaatgtaaaagaggcggtgcaagga
gaggaggaggatggcagcaggacagtgggctcaggggaggaagctcctcctacatcctcc
actcctccagacctccatgagcccaacagcaacctggactttgacctgtccagcgactct
gactctgttacgtgtaaaccaccctcatcagacagtgagggggagtacagccagaccagg
aagtccaaagaggaagtggcggagcaggcggcactagaggagccatcaggcagtcctgga
ggaaaggaagaggggggtattaagcagaagcgcaccggggagaacagctccgaggtagga
ggggagacgtctgtgcttgtcctccctcctgagcaggggaacgggcgctcagaacggagg
aaggctgagccagagtcccagaacagtgaacagtcaggagtcaccatggaggaggtggac
aaggataaccacctcatctacctacaagaggtgttggagcgtatccatagggaatactac
gcccgctacaacgccttcctcgggaaggaacgcccagagacgcctgatatcaggaagatc
gtcccggagctgaaggcccggagcttggagggcaccaccattgtgttctctgggctgtac
cccaccaactaccccatggagagaaccagggagaactaccacgccaaggccctgggagca
aagatgggaaaggacctcctgctcagctcaaaagaccctggcagaaccacgcacctcatt
gctgctagagcaggtacagagaaggtgcgtcaggcccaaggctgtaaacgtctccatgtg
gtgaatcctgactggctgtggggatgtctggagcgctgggaaagggtggatgaatcactg
tatccactgaaggaggactacaccaagacccaacggagcaacagcccagccacgttccct
gaccaccaaggatccttccagaaccccctgttaccccccgcccccctccacctcccccct
ccagctgcccctgaggtgcggacgtacgacccggttacggggaagctgattcgccgcggg
cttcatgcctccagaccaccatcttacctccaggcctccatgtctgctgcccacggggac
cagacatccctgagggggggtcagaaggaccagcagggggagacgtcgggtccctccagt
cgagacgaggagcagcctggaccctcctgccgccggagggaacgccagcccagcatgtca
gagaccaaccctctctacacattctgtaaagaagacctggacagcatggataaggaggtg
gacgacatgctagatgaggagagcgacgaggagggagaaggccgggggaagaagacgatg
gaggaagtagaggggcagcggccaaagggtagtggacagagcactgaggaagagaagcac
caccaacggcaccagctgaagcagcaccatcaccagctgcagcagcagggtctggccacc
gttgaagaggagacggagaaaacacagacgccaactagtgaccagggcggtacgacgacg
gcggacagcgtgccaaggggacagaagcgcaagcttgctgaggccaaggaggaggaagag
ggggagtcggcggacgagtccaccaaggattctaatgaggaagaggaaggaagcagctca
gaggctgatgagatggccgctgccctggatgcggagctcaacgacttcatttga
DBGET
integrated database retrieval system
