Salvelinus fontinalis (brook trout): 129831254
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Entry
129831254 CDS
T11136
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129831254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129831254
03021 Transcription machinery [BR:
sfon03021
]
129831254
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129831254
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129831254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
129831254
NCBI-ProteinID:
XP_055750434
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All DBs
Position
32:37709466..37760599
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AA seq
683 aa
AA seq
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MFVPLPVPFVFQRTASDFSAWRLKSPLALRSSSDIRMSKLAEDEKPGADFPEESTDSERN
SPDANDQVQPMKTSPFSLSPSLSNTKSKSEAGPEMTSTHVPPPSQQQTPHPHTQLMLAGS
QLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQANQQQQQQQQQLTK
QEHAQPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLPQAQGQQGQQGKWDL
LSLLSTPNLISLPQHQQSQGSLLTTPPRLGLQAQRRHGDGLTSLQRDKSGDGGVTSGASA
APMTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTIS
RFEALNLSFKNMCKLKPLLEKWLNDAETMAIDNMLPSPSSLSSPMMGFEGMTGRRRKKRT
SIETNVRVALERNFISNQKPNSEEILLMGKQLNMEKEVIRVWFCNRRQKEKRINPCSATP
PLPSQSPLVTHKPPCYSPHMMSSQGLHQAATSLSTTVTSPSPSATCPLTPSGSATMSSAT
VTPPQHSTASNASAHSLNAGNTMMGVSTGMNQALVGSNPLATMQALAASGGQLPVSSLEA
GGQMILGGAGVRPSLFLNRHTLLPMASHQACVGLVGGPRGDSPPPRASGMDVDSCSASPC
SSPASFCSFSEASPPPLGGAMAE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtctttcagagaactgcttccgacttcagcgcc
tggcgtctcaagtccccgctggctctacgctccagctccgatatcaggatgtcaaaacta
gcagaggatgagaagcctggggcagactttccagaggagagcacagactccgagaggaac
agtcccgatgcaaatgatcaggttcagccaatgaaaacgagtcccttcagtctttctcct
tccttgagcaacaccaagagtaaaagtgaggctggccctgagatgacctccacccatgtg
ccgcctccctcccagcagcagacacctcaccctcacacacaactcatgttggcagggagt
cagctggcagggctggctgccctcttgcctgcgcagcagcagctgttgcttcagcaggcc
caggctcagctcctggccgctgccgtgcagcagtccaacgcggctcacgctgctcatgcc
gcccacgcagcagcccaagccaatcagcagcagcaacaacagcagcagcagctgaccaaa
caagagcatgcccagccccagctcacgctctctcagcctatccagctcaccgcccaggat
atccagcaactgttgcagctgcagcagttagtcctgatgcccggccatcacctgcagtct
cctcagttcctcctgcctcaggcccagggacaacaggggcagcagggtaagtgggaccta
ctaagtttgctctcgacaccaaatttaatttcgctacctcagcatcagcaaagccaaggg
agtcttctaactactccacccaggctgggactgcaagcacagcgtcgtcacggtgacggc
ctcacgtcgttacagagggacaagagcggggacggcggcgtgacctccggggcctcggcc
gccccaatgacctcggtgacctctggcccgcacggcgaggagccaagtgacctggaggag
ctggagcagttcgcccgcaccttcaaacagagacgcatcaaactgggcttcacacagggt
gacgttggcatggcaatggggaaactgtatgggaatgacttcagccagaccaccatctct
cgcttcgaggccctcaacctgagcttcaagaacatgtgcaagctcaagcctctgcttgag
aagtggctaaacgacgcggagaccatggcgatagacaacatgcttcccagccccagctct
ctctcctcccccatgatggggtttgagggcatgacggggcgccgcaggaagaaacgcacc
agcattgagaccaacgtccgcgtggccttagagcgcaacttcatctcgaaccagaagcct
aactcagaggagatcctcctgatgggaaagcagctcaacatggagaaggaggtgatccgg
gtctggttctgcaaccggcgccagaaagagaaacgcatcaacccctgcagtgccacccct
cccctgcccagccagtccccccttgtgacgcacaaacccccctgctacagcccacacatg
atgtctagtcaggggctgcaccaggctgccaccagcctcagcacaacagtgaccagtcca
tcgccctcggcaacctgccctctgacccccagtggctctgcaactatgagctccgcaact
gtgactccgcctcaacacagcacagccagcaacgccagtgcccacagcctgaacgctggg
aacacaatgatgggagtaagcacagggatgaaccaggctctcgtcggcagcaatcccctg
gccacaatgcaagctctggctgccagtggtgggcagctgcccgtttccagtcttgaggcc
ggaggtcagatgatcctgggcggggctggggttcgcccctccttattcctcaaccgccac
accctcctgcctatggcgtcccaccaagcctgcgtgggattggtcggcggtcccaggggc
gactctccgcccccccgcgccagcggcatggacgtcgactcctgctccgcctctccctgc
tccagccctgcctccttctgctcgttcagcgaagcctcaccgccgccgcttggcggggcc
atggccgagtga
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