Salvelinus fontinalis (brook trout): 129831287
Help
Entry
129831287 CDS
T11136
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04020
Calcium signaling pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129831287
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129831287
04082 Neuroactive ligand signaling
129831287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129831287
Ion channels [BR:
sfon04040
]
Ligand-gated channels
Glutamate (ionotropic)
129831287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129831287
NCBI-ProteinID:
XP_055750518
LinkDB
All DBs
Position
32:complement(38621137..38680131)
Genome browser
AA seq
1958 aa
AA seq
DB search
MYCGWRDEGRRECRAPEKQSLFACEPPPPLRPPNCAPPPPSPMAAKPALSLLLAVLACTG
PARSSPPLLLRPRERERDLGVVNIAVVHSGSSLLPETAAAGGTGATGGPGGPQGRGASSS
LATVSASAPLASASAALVGDSVMTQYGPANVIYLTVNESSPASLLLQLCELLATTPLQGL
VFEEERPPPHNQAPLAPMMEFVSAQTGVPVVAVGGGAGLGREPQESGSIYLQFTCSTAMQ
LDVIFEVLEEFDWTSFSVVATRHHGYEDFLAMVEGLTDGSFIGWEKKGVVMLNVTDDPGG
TRTRRLLKENEAQVRLLYCSQEEAALIFKAAWASGQAGHSHMWFAVGPALSGLGLEGLPK
ALFAVRPQGWRDEPRRRIAKGVSVLTHGAMALRKEYGWARGPHYFAGNCQTDGNQTQRVP
DRIRFFSNITLSGRDYSFNSDGYLSNPVLDVISYSEGKGWEEVGTWQNGVLDLIIQPFSR
YGSFLKPLDDTQHLKVVTLEERPFVIVEPADPGTNSCIRDSVPCRLPLNTTNVPVDEKSS
KHCCKGFCIDVLKRLAKIVGFSYDLYLVTNGRHGKRGSDGQWNGMVGEVVYKRADMAIGS
LTVNKERSEAVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAV
TVFIFEFFSPVGYNRSLQSAKKTGGSKFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMV
LVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQQPTEQYPPLRFGTVPNGSTE
ENIRSNYANMHNFMIRNNQKGVEEAIDNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIG
SGKVFATTGYGIALHKNTRWKRPVDLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSK
LDIDNMAGVFYMLLVAMGLSLLVFSWEHLVYWKIRQCLGHSGGMDFLLALSRGMYSCCKF
KDETISGGLKNTLPLYHSVPTMPPPPQSHISAAVTCNTTLAMVQQQQMHQQQQQQQAYSM
LPAASPPTTGHSAMAIGPSNSPLMEGPMPCSTFLPRHDRRLAVVDRWNRPKPSTDKPIGG
SGGIPDMAQFQQGLPPHWAGGAGGGDGSLDEYKRYYGPIDPEGLGANADPQTGGSQTPKI
NQRGTKSSGMPRLPSKGPPPWHFMSKPPLPLPSSPHRPLFWRRGSLPKRKGSGGPLYENI
LPLGRRGGGRYGARDGGGRRSRCPPPLPLPVPVSSPAHTTPTTPSHSVLYTSSSCSSTSS
SSSSSSSSVSLSRSNSTSSSITSYTSSQSFKYRAGSRDVEDIYDSDELTEESSLLLVRRK
GKSRRMSSRSLPCSPPPPPVPPRKPHLQYERERAGSQLAQLQEWWASWGERERRRGTGTR
AEGKEEKRHHKESERERKRRKKGRKKKKREEKERERERKRRKVKKKRKKEEKVKRRDRGK
RSEHEGDGEQRGHLKAITQEAYSSYPAPRRDSMRKKSESSIRSYGWDIPRDEERREREDK
ERDDGDDTRGKERNRSPHSRHRHADRPSSSSKQYQSSSKPSTSVKFWGAGNPSSETPSSA
FLPLIPFSSRRRSKGSDREALGKEGETRPLLGRNERVEVHSKEGLSFHEWESEDEDDDSK
AQRRKVEQETRHERRRRTASESERERDKVVGIYSDDDGSSGEFGKFERYWDGHEGRAVGG
IGGGGWFFGTYPAREKAGSINSRDDSLLRHGEGWGGAGEGGWGSGEAWGSRRIGGTQWPP
PPLTPPAPRRYWSVDKLPVKEEKKGKRKVKGRGDVACNCQSALEHQHAHSKWAKVSSRSQ
EELFLHCQRFGSSANSKRHSSKPDRTQNQPISGSQSNLSIQRTQRTDRIRQSSTSQTLIP
SLPPPTLPALPAPPSASHPIHVPLPTSSSSVSSPSVVSSTPGAPQPSSMASASAKLLYQR
LRSVPQPQRLQSPHLPLKAKSLCSRRGSAHFSSVESEV
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtggatggagagacgaggggagaagagagtgtcgggctcctgaaaaacagtcc
ctcttcgcctgtgaaccgccgccaccactccgcccaccaaactgcgccccccctcctccc
tcccccatggcggccaagcctgccctctccctcctgttggccgtgctggcctgcacgggg
cccgcccgctcctcccctcccctcctgctccgcccccgggagagagagagggacttgggc
gtagtcaacatcgctgtggtccactcgggctcctccctgctcccggagacggctgctgct
gggggaacgggcgcaacgggcgggccgggggggcctcagggaaggggggcctcatcgtca
ttggctacggtgtcggcgtccgcgccgctggcgtctgcatcggcggctctggtgggcgac
agcgtgatgacgcagtatggcccggccaacgtgatctacctgacggtgaacgagagcagc
ccggcgagccttcttctgcagctgtgtgagctgctggccaccacgccgctccagggcctg
gtgttcgaggaggagaggcccccgccacacaaccaggctcccctggcccccatgatggag
tttgtctcggcccagaccggagtgcccgttgtggccgtgggaggaggggccggcctgggc
agggagccacaggagagcggctccatctacctccagttcacctgctccacagccatgcag
ctggacgtgatcttcgaggtgctggaggagttcgactggacctccttttccgtggtggct
acgcgtcaccacggctacgaggacttcctggccatggtggagggcctgacggacggatcc
ttcatcggctgggagaagaagggagtggtcatgctcaacgtcaccgacgacccaggaggg
acgcgcacacgcaggctgctcaaggagaacgaggcgcaggtgcgtctcctctactgctcc
caggaggaggccgcactgatcttcaaggcggcctgggcctcgggtcaggccggacactcc
cacatgtggttcgccgtggggccagccctgtccggccttggcctggagggcctccccaag
gccctgttcgcagtgcggccgcagggctggagggacgagccccgcaggaggatcgccaaa
ggggtgtctgtgctgacccacggagccatggctttgaggaaggagtacggctgggcccga
gggccacactacttcgcaggcaactgccagacagatggcaaccagacgcagagggtgcca
gacaggatcaggtttttcagtaacattacgctgagtggccgggactactcgttcaacagc
gatggctacctgtctaatccagtgctggacgtgatttcctactccgaggggaaaggctgg
gaggaggttggcacgtggcagaacggtgttctggatctcattatccagcccttttcacgc
tacggctccttcctcaagccgctggatgacacccagcacctcaaggtggtcaccctggag
gagaggccctttgtcattgtggagccagctgacccaggcaccaactcctgcatccgggac
tcggtgccctgcagactaccgctcaacaccaccaatgtgccggtggatgagaaatcatcg
aagcactgctgcaaaggcttctgcattgacgtcctcaagcgattggccaaaatagtgggc
ttctcctatgacctctacctggtgaccaatggcagacacgggaagagggggagtgatggg
cagtggaatggcatggtcggggaggtggtttataaacgggccgacatggccattggctcc
ctgaccgtcaacaaggagaggtcagaggctgtggagttctccgtgcccttcgtggagacg
ggcatcagcgtcatggtctcccgtagcaacggcaccgtctcgccgtcggccttccttgag
ccgtacagcccagctgtgtgggtgatgatgttcgtcatgtgcctgtccgtggtcgccgtc
acagtctttattttcgagttcttcagccctgttggctacaaccgcagcctgcaaagtgca
aagaagacagggggctctaaattcaccatagggaagtctatctggctgctgtgggctctg
gtcttcaataactcagtgcctgtggagaaccccagaggaaccactagtaagatcatggtg
ctggtgtgggccttcttcgctgtcatcttcctggcctcctacacggccaacctggcagcc
ttcatgatccaggaggagtacatcgacactgtgtctggcctcagcgacaagaagttccag
cagcccactgagcagtaccccccactccgatttgggaccgtccccaacgggagcacggag
gagaacatccgcagcaactacgccaacatgcacaacttcatgatccgcaacaaccagaag
ggcgtggaggaggccatcgacaacctcaagactggcaaactagatgccttcatctatgat
gcggctgtgctaaactacatggcgcggaaggacgagggctgtaaggtgatgaccattggc
tcgggcaaggtgttcgccaccacgggctacggcatcgccctgcataagaacacccgttgg
aaacgccccgtggacttggccctactgcagctggttggagacgacgagatcgacatgctt
gagcgcctgtggctctctgggatctgtcacaacgacaagattgaggtgatgagctccaag
ttggacatcgacaacatggcgggcgtcttctacatgctgctggtggccatggggctcagt
ctgctggtgttctcctgggagcacctggtgtactggaagatcaggcaatgcctgggccac
tccgggggcatggacttcctactggccctcagcaggggtatgtacagttgctgcaagttt
aaagatgaaaccatctctggaggcctaaaaaacacacttcccctatatcatagtgttccc
acaatgccgcctccaccccaatcccacatctcagcggctgtgacctgtaacactactctt
gctatggtgcagcagcagcagatgcatcagcagcagcagcaacagcaagcatacagcatg
cttcctgctgcatctcctccgactactgggcactctgcaatggccattgggccatcaaac
agtccccttatggagggtcctatgccgtgctccacttttctgcctcgtcatgaccgcaga
ttggctgtggtagaccgctggaaccgtcccaagcccagcacggacaaacctattggtggc
agcggtgggatcccagacatggcacagtttcaacagggcttgccccctcattgggctggg
ggagccggtggaggggacgggagtctggatgaatacaagcgatactatggcccgatcgat
ccagagggcttaggggcaaatgctgacccacaaacaggtggctctcaaacccccaaaatt
aaccagaggggaacaaagtcctcaggaatgccacggctaccttctaaaggaccgccccct
tggcacttcatgtccaagccccctctaccgctcccctcatccccacatcggccgctattt
tggagaagaggcagcctccctaaaagaaaaggctccggggggcctctgtatgagaacatc
ctccccctggggagaagagggggagggcggtacggcgcaagggatggaggtggcaggcga
agccgttgccctcccccactccctttgcctgtccctgtctcgtcccctgcccacactact
cctaccactccttctcactccgtcctctacacctcgagctcctgctcctccacctcatcc
agttcatcctcgtcctcatcctccgtctccctctcccgctccaactcaacctcatcctcc
atcacctcatacacatcgtcccagagttttaagtacagggctggcagtagagatgtcgag
gacatctatgactctgatgagctgacagaggagtctagcctcctgctagtacggagaaag
ggcaaatctcgacgcatgtcctctcgctcactgccttgcagtccaccccctccgcctgtg
ccaccccgcaagcctcatctacagtatgagagagagagggcagggagccagctagcccag
ctgcaggagtggtgggcctcctggggcgagagagaaagacgtagaggaacaggaaccagg
gctgaggggaaggaggagaaacggcatcacaaagagagtgaaagggagagaaagaggagg
aagaaagggcggaagaaaaaaaagagagaggagaaggagagagagcgggagcgcaagcgg
cgtaaagtgaagaagaagaggaagaaagaggagaaggtgaagagaagagaccggggcaag
cgatcagagcacgagggagatggtgagcagagagggcacctcaaagcgataacgcaagag
gcctactcctcctaccctgctccgaggcgtgactccatgcggaaaaagagtgaaagttct
atcagaagttacggatgggatattccaagggatgaagagaggagagagagagaggataag
gaaagagatgatggagacgacactagaggcaaggaaaggaacagaagtcctcactctcgc
cacaggcatgcagataggccttccagttccagcaagcagtaccagagctccagtaaaccc
tcaacctctgtcaaattctggggagcaggaaacccatcctcagagactccttcatctgca
tttctaccactgatccctttctcatccaggcgcaggagtaagggttcagatagagaggcc
ctagggaaagaaggggagacgcgccccctgttgggcaggaacgaaagagtggaggttcac
tccaaagaaggtctgtcgtttcatgagtgggagtccgaagatgaggatgacgattccaag
gcgcaaaggagaaaagtggagcaagagacgagacacgaaagaagaagaaggaccgcatca
gagtccgaaagggaacgcgataaggtggtgggcatctactccgacgacgacggctcctcg
ggagaattcggaaagttcgaaaggtactgggatggtcatgagggtagggcggttgggggc
ataggagggggaggttggtttttcggcacttatcccgccagagaaaaagctggcagcata
aacagtagggatgactcgttactgaggcatggggagggatgggggggagcaggggaaggt
ggctggggatcaggtgaagcctggggttcaaggaggataggtggtacacagtggcctcca
cctccattgacaccaccagctcctcgaagatactggtccgtggacaagcttcccgtgaag
gaggagaagaaagggaaaaggaaggtcaaagggcgcggtgatgtggcttgcaactgccaa
tctgccctcgagcatcaacacgctcactctaaatgggccaaggtgagctctcgtagccag
gaggagctatttctacactgtcaacgtttcgggagcagcgccaattccaaacggcattcc
tccaaacccgaccggacccagaatcaacccatatcgggaagccagtccaacctcagcatc
cagcgaacacagcggacggaccgcattcggcagtcctctacatcgcaaaccctcatcccc
tccctccctccaccaacactcccagcccttcctgcccctccttctgcatcccatcccatc
cacgtccctcttcccacctcgtcctcttcggtctcatctccctctgtagtatcctccacc
ccaggcgccccccagccgtcttctatggcttctgctagtgccaaactcctgtaccagaga
ctgcgctcagtgccccagccccaaaggttacagtcacctcacctgcccctcaaggccaag
agcctctgttcacggagggggtctgcacacttctccagtgtggagagtgaggtgtga
DBGET
integrated database retrieval system
