Salvelinus fontinalis (brook trout): 129831405
Help
Entry
129831405 CDS
T11136
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129831405 (rnf115b)
04121 Ubiquitin system [BR:
sfon04121
]
129831405 (rnf115b)
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129831405 (rnf115b)
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129831405 (rnf115b)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129831405 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
Zn_ribbon_19
zf-C3HC4_3
HypA
C1_2
U-box_ZFPL1
DUF7560
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
129831405
NCBI-ProteinID:
XP_055750755
LinkDB
All DBs
Position
32:43281746..43287240
Genome browser
AA seq
290 aa
AA seq
DB search
MAEAAAAQHRFFCHCCKGEIDPKFPEFTCPRCESDFIEELTEDYSLLENSSTAEANDDAG
TLFSELWQLLFMERSALLSDPSAYESDQSQLQAAPASDAVEDELGGTEPLEPEPERTSRP
PSQGRRQSRVPAVEGIVQQFLAGLFANNGNPGVAPAALSGMFHSNPGDYAWGQGGLDAVI
TELLGQFESTGPPPAEKEMISSLPTVNISQEQTDSRLECPVCREEYSVGESVKQLPCLHY
FHSDCIVPWLKLHDTCPVCRKSLDGVDQSIQPPPEPPSIRTDPQEERRAI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggcacaacaccgctttttctgtcactgctgtaaaggtgaaatc
gaccctaaattcccagaattcacgtgccccaggtgtgagtccgatttcattgaggagttg
acagaagactacagtctcttggagaacagcagcactgcagaggccaatgatgatgcaggc
acactcttttcagagctgtggcagctgctgtttatggaacgctctgctcttctctcggac
ccctccgcctatgagtctgaccagagccaactacaggctgccccagccagtgatgcagtg
gaggacgaactgggaggcacagagcctttggagcctgaaccggaacgcacctctcgcccg
cctagccaggggaggcgacagtcccgcgtgccagcagtggagggtattgtgcagcagttt
ttggctggtctgtttgccaacaatggaaatccaggcgtcgcaccagctgcactgtctggc
atgttccattcaaatccaggggactatgcctggggtcagggaggtctagacgcagttatc
acagagttgttaggtcagtttgagagcacaggtccacctcctgcagagaaggagatgatc
tcatccctccccacagtcaacatctctcaagaacagacagacagcagactggagtgtcca
gtatgtagggaggagtactccgtgggagagtctgtcaaacagctgccctgcctccattat
ttccacagtgactgcatagtgccatggctcaaactgcacgatacctgtcctgtgtgtcgt
aaaagtcttgacggcgtcgaccagagcatccagcccccaccagagcccccctccatcagg
acggaccctcaggaggagagacgggctatttga
DBGET
integrated database retrieval system
