Salvelinus fontinalis (brook trout): 129831616
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Entry
129831616 CDS
T11136
Name
(RefSeq) cell adhesion molecule DSCAML1-like
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129831616
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
Other
129831616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Interfer-bind
fn3_2
DUF1461
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
129831616
NCBI-ProteinID:
XP_055750933
LinkDB
All DBs
Position
33:45261083..45375210
Genome browser
AA seq
1916 aa
AA seq
DB search
LFLLLLFSSPGNRFFLTSFGALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMD
PTESTPSVLDSFQSGEVQVGRNVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLT
VSDLRLGDSGNYICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQG
SPHFTLSWYRNTEPVLSDQHFSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSI
ILLEDGTPRIVSSFSERVVVPGEPFSLMCAAKGAPPPTITWTLDDEAVARDPSRVRASQY
TLSDGSTVSHVNVSSPEIRDGGVYRCAARNSAGSAEYQARINVRGSPRIRDMRNITAVAG
RNTFINCRVIGYPYYSIKWYKEGLLLPDNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLI
QPQIFISQTVYVQVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEIVP
SSGVNIETKEYMSSLQIGKVSLKHNGNYTCIASNDAATVSSERQLTVTVPPQFVVQPNNQ
DGIYGKAGVLNCSVDGYPPPKVMWKHAKGTGNPQQYHPVPLTGRIQIMGNGSLLIRHVLE
EDRGYYLCQASNGVGSDISKSMVLTVKIPAMITSHPNTTMAIKGQIKELNCTARGEWPII
IRWERGDTVIDPDRNPRYAITTSPNEKSDEVLSTLKLKPAERGDSVFFSCHAINSYGEGR
GLIQLTVQEPPDPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDPWELKHAT
RKISPTNNQANIVDLHPAQVYSIRMFSYNKIGHSQASKELTISTEEAQPDGPPMEVFLQP
MTSQSIRVTWKAPRKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLK
KFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRL
TLHGVLKGYRVVFWSLFPDGEWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGV
RSNVLYIQTREDHPGPPAGIKAVPSSTSSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPA
PSEYEANPELLFYRVTHLNRGQQYLIWAAAVTTAGRGNISDKVTVEPAGKAPAKILSFGG
TVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTLDGQRLIMANGTLVLRSVKAED
SGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSSTSITLAWIPGDNGGSSIRGFV
LQYSVDNIEGWRDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGR
EPQFNKDHPVFTHVNSTHARLNLQGWASGGCPITAVLLEFRPKGNWAWQSVRTNATADVF
LAELREATWYELKMKACNSAGCGNQSSQFATLDYDGSTIPPIKSARPEGDDVKKLFSIGC
PVILVTLVVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHI
DIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQNVNPQSFCTGVSVHHPALIQNTGPLI
DMSDIRPGTNPVSRKSVKSTHSTRNRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITV
TESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFIS
DSSSDQMTTGTNDNADSMTSMSTPSETGLCRFTASPPKPQDYDRGRPTNVAVPIPHRANK
SEWTGKSDYCNLPLYMKTDPFFRKQSELRDPCPVVPPREASIRSLAQRAYHSQGRHMTLD
SSKQQQALTVGHAGLAGLSASGGASGGGSGGAVGGATGGPSGGSSTSSLPQRTLTMPGSS
SSSAQSAAAATDAASGGATGGDSRDSLLESSSSGLGRLDRQKQAAGGAYSKSYTLV
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
ctcttcctcctcctcctcttctcatctccagggaaccgtttcttcctgacgtcgttcggg
gccctgtacatatcagaggtccagaaggaagatgccctgtccacctaccgctgcatcacc
aagcacaaatacagtggagagactcgccagagcaatggagccaggctgtctgttatggac
cctacggagtccaccccctcagtgttggacagtttccagtccggggaggtccaggtgggg
cgtaatgtggagcttccctgcattgcctcggggtatcccaaccccaccatccgctggctg
aaggacggacgcccgttgcccgccgactcccgctggacgcgccgtctcacgggcctgacg
gtcagcgacctgcgtctgggcgacagcggcaactacatctgcgaggtcaccaacagcttc
ggctctaaagaggtgaccggtcatctcaacgtcatcgagccgttgagagtgactctatct
cctaagaacctgaagactggcatcagcagcacggtgatcctgtcgtgtgccgtgcagggt
tctccccacttcaccctgtcctggtaccgcaacacagaacccgtcctctccgaccagcac
ttctccatccagggggcccacaatgagaccctgttcatctccgctgcccagaagagacat
tcgggagcctaccagtgcttcgccacccgaaagggccagaccgcacaggacttctccatc
atactgctggaggatggtacgccccgcatcgtgtcctccttcagtgagcgtgtggtggtc
ccgggggaacccttctccctcatgtgcgctgccaaaggcgcccctccccccaccatcacc
tggactctggatgatgaggctgtggccagggacccgtcccgggtgagggccagccagtac
acgctgtcggacggctccaccgtgtcccacgtcaacgtcagcagcccggagatccgcgac
ggaggggtgtatcgctgcgccgcacgcaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggttctcccaggatcagggatatgcgtaacatcacggcggtggctggg
aggaacacctttataaactgccgtgtgattggctatccctactactcaatcaagtggtac
aaggagggacttctgctgcccgacaaccatcgtcaggtggtgtatgagaacggtactctg
aagctaagtgacgtccagaaggtcttggacgagggggcgtacctctgcagcgtgctcatt
caaccacagatcttcatcagccagaccgtctacgtccaggtcaaagtgccccctctgatc
caaccctttgacttcccccccacctccattgggaagctcatgtacatcgcctgcgtggtg
tcgtctggcgacatgcccatccacatcacctggcgtaaggacggccaggagatcgtgccc
tcgtccggcgtcaacatcgagaccaaggagtacatgagctcgttgcagatcggcaaggtg
tcgctcaagcacaacggcaactacacctgcatcgctagcaacgacgccgccaccgtcagc
tctgagaggcagctcactgtcacagtgccgcctcagtttgtggtccagcccaataaccag
gatggtatctacggcaaggcgggggtcctcaactgctccgtggacggatacccgcctccc
aaagtcatgtggaagcacgccaaaggtacagggaacccccagcagtaccacccagtgcct
ctgaccggtcggatccagatcatggggaacggctccctgctgatccgtcacgtcctggag
gaggaccggggctactacctctgtcaggcctccaacggcgtgggctccgacatcagcaag
agcatggtcctgaccgtcaagatcccagcaatgatcacgtcgcatcccaacaccaccatg
gccattaagggccagattaaggagctgaactgcacagcaaggggggaatggcctatcatc
atccgttgggagcgtggtgacacggtcatcgaccctgaccgtaaccctcgctacgccatc
accaccagccccaacgagaagagtgacgaagtattgtctacgctgaagctgaagccagca
gagcgaggtgactcggtcttcttctcctgccatgccatcaactcatatggagagggccgg
ggcctcatccagctcactgtgcaagagcccccagaccctccagagttggaggtgagggag
gtgaaggatcggagtatgaacctgcgctggacccagagatttgacggcaacagcatcatc
accagctacgacattgagtacaagaacaagaccgatccgtgggagttgaagcatgccacc
cgtaagatctctcccaccaataatcaggccaacatcgtggatctgcaccctgcccaagtc
tacagcatccgtatgttctcctacaacaagatcggacacagtcaagccagcaaggagctc
accatcagcacagaggaagcacagccggatggtcctcctatggaggttttcctccagcct
atgacctcacagagcatccgcgtcacctggaaggcccccaggaaggagcttcagaacggg
gtgatccggggttaccagatcggttaccgtgagaacgggccgggcagtaacggccagtat
agcatcgtggagatgaaggctacgggggacagcgaggtgtacaccctggacaacctgaag
aagtttgcccaatatggagtggtggtccaggccttcaacagggccggcacaggcccgtcc
agctctgagatcaacgctaccacactggaagatgtgcccagccagccgccccagaacgtg
cgggccatctcggtgacatcagacgaggcggtaatcacgtgggcggagcccccgcgtctg
acactacacggcgtgctgaagggttaccgtgtggtcttctggtccctcttccccgacgga
gaatggggcgagatgcagaacatcacgacaactcgtgagcaggtggagctgagagggctg
gagaagttcactaactacagtgtgcaggtgctggcctacacacaggctggggacggggtc
aggagtaatgtcctgtacatccagacccgcgaggaccaccctggccccccggctggcatc
aaagctgtgccttcttccaccagcagtgtggtggtttcctggctacccccgcacaagccc
aatggaatcatccgcaagtacaccatctactgctctagccccggatcaggccaaccggcc
cccagtgagtacgaggccaaccccgagctgctgttctaccgggtcacccacctgaaccgg
ggacagcagtacctcatctgggccgccgccgtcaccaccgccggacgggggaacatcagc
gacaaggtcactgtggagcctgctgggaaggccccagctaagatcctatcgttcggaggt
acagtgaccactccctggatgaaggaggtgaggctaccctgcagctcagtgggcgaaccc
acccccaccatcaaatggaccaaagacagtgaggacacagccatcccggtaactctggac
ggtcagaggctcatcatggccaatggcacgctggtcctgcgctcggtgaaagctgaggat
tctgggtactacacgtgcacggccaccaacacgctgggctttgacaccatcattgtcaac
ctgctggtgcaagttcctccagaccagccccgtctgactgtctccaccacctcctccacc
tctatcaccctggcctggatccccggggacaacggaggatcctccatcagaggtttcgtg
ctgcagtactcggtggacaacatagaggggtggagggatgtgttcatcagttccagtgag
aggtccttcaagctggacaacctacgctgtggcacctggtacaaggtcaaactggccgcc
aagaacagcgtgggagcgggacgcatcagtgaaatcatcgaggctaagacccacggacga
gagccccagttcaataaggaccatccggtgttcacccacgtcaactctacccacgcccgg
ctcaacctgcagggctgggcgagcggtggctgccccatcacggccgtgctgctggagttc
agacctaaggggaactgggcgtggcagagcgtgcgcaccaacgccacggccgacgtgttc
ctggctgagctccgcgaggccacctggtacgagctgaagatgaaggcgtgtaacagcgcc
ggctgtgggaaccagagctctcagttcgccacgctggactacgacggcagtaccatccct
cccatcaagtcagcgcggcccgaaggcgacgacgtcaagaagctcttctccatcggctgc
cccgtcatcctggtcactctggtcgtcgccctgctcttcatcatccgcaagaaacgcaaa
gagaagagactgaagagactgagagatgccaaaagcctggctgagatgctgatcagtaag
aataaccggagctttgacacccctgtgaaggggccccctcagggcccacgacttcacatc
gacatccccagagtccagctgctcatcgaggataaggaaggcatcaaacagatcggtgaa
gacaaagccaccatcccagtgacggacacagagttcagccagaacgtgaatccacagagc
ttctgtacgggcgtgtctgtgcatcaccccgccctcatccagaacaccggccctctgatt
gacatgtctgacatcagaccagggacaaacccggtgtcgaggaagagcgtgaagtcgacc
cacagtacgaggaaccgctactctagccagtggaccctgaccaagtgccagtcgtccaca
cccgcccgtaccctcacctccgactggcgcaccgtgggctcccagcatggcatcaccgtc
accgagagcgacagctacagcgccagcctctcacaggacacggataaggggcgtaacagc
atggtgtccacagagagcgcgtcctccacctatgaggagctggcgcgggcctacgaacac
gccaagcttgaggagcacctgcagcacgccaagtttgagatcaccgagtgcttcatctcc
gacagttcctcagaccagatgaccacgggcaccaacgacaacgccgacagcatgacctcc
atgagcacgccgtccgagacgggcctgtgtcgcttcaccgcctcgccacccaaaccccag
gactacgaccgcggcagacctaccaacgtggccgtgcccatcccccaccgcgccaacaag
agcgagtggactggcaaaagtgactactgtaaccttcccctctacatgaagacagaccca
ttcttccggaagcagtcggagctgcgtgacccctgcccggtggttccgccccgcgaggcc
tccatccgcagcctggcccagcgggcgtaccactcccagggccgccacatgactctggac
tcctccaagcagcagcaggctctgactgtgggccacgctggcctggccggcctcagcgcc
tcaggaggagcatcagggggtggaagcggtggtgctgtaggaggggcaactggagggccg
tctggtggttccagcacctcctccctgccccagaggactctcaccatgcccggctcctcc
tcttcctctgcccagagcgctgcagccgctaccgacgcagccagcgggggagccacgggg
ggagactccagagactctctgctggagagcagctcgtcaggcctgggcagactagacaga
cagaagcaggcggctggcggggcctactccaaatcttatacactggtgtag
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