Salvelinus fontinalis (brook trout): 129831933
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Entry
129831933 CDS
T11136
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129831933
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
129831933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
129831933
NCBI-ProteinID:
XP_055751535
LinkDB
All DBs
Position
33:27927028..27958092
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AA seq
2116 aa
AA seq
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MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHHELSSEEDGEWESGLSYECRTLLF
KAVHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGDSNVCTSVEI
AQHQPVQRLGEEHLSLAQQNASPLQVILSPYGLNGTVTGQSFKMSDHPTQKLIEEWRQFY
PISPSAKDRPEDKMEDADWEDDSLAAVEVLVAGVRMVYPACLVLVPQSDLPALAPQGSAN
PSPVLCEGQGAHRDPAMSSVTLTPPTSPEEAQTDSQAAQRWLKLCSTVDGFSSNSSGIHG
SKIPRRLAAQVVESVWQECTTNRAQNKRKFATLTNGTCEEEEGDKTGVWDFVEFSHRAHC
NCSRHKNQKQRSGSTSGNPPSVGQPSQPLPKHKLGEKLEKGEKQQKRPQTPFHHRSYVFE
EQAMEPQRLCMRTQDEGPYPSLHHVDTAPSKAPMLHPHRPLQDLAGSPQPPPLSPHPCER
GEEDPGAMKSSSTPIHQHFYPPSSEPCLLPQKTSSDEPHLEPLPLPFPPAYPDSLEPTVY
VGSAINPNEDSAHNPWKYFNLPRKKTSDFFTPLLPVDKLQDDSGEGGGQENIVSVTELMS
GSGRPLKVSEDLVRTYTQRRNSHLAAAMADEDQEEEPDPYAFVEGDEEFTFTDKKDKPGS
DRETSKRHKGDDGSGTSADDGQGAAGGKPVPSTSLIHETDLAVSINDLDNLFNSDEDELA
PGSRRAGVNGDKFGSKEHKTSNLDPLSCISSADLHKMFPTPPSLEQHIMGYSPMNTGGKD
YGGLEAGVGLTLLDGSQFSSHYKMEVEEGFCSPKPSEIKDFSFVYKSEACKAFTGCSMFA
PLKMLPSQCMMPIKLPEDCVYTPSWNMGKLELIPPVPTMGLLTKDGNIPSVEPDYQSYTP
QTHTPFMSNSAPPSNSGTGILPSPATPRFSAPTPRTPRTPRTPRGPASVQGSLKYDNSDL
YSPASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNMN
IRGADVGVYLNDNGEAQYPCTCGFSAVVNRRYGSSAGLFLEDELDVVGRGSDAGRDSERR
FQELRAASLHRIGNPTERPPDELILLLQDQCTNPFSRMAGVEYPKALSSGPSHSSLRVEE
RDCYNDCYMALEHGRQFMDNMSGGKVDEALVKSTCLHNWPKRKTAEVSRLFSQDILRVLL
SLQPVLQDAIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYD
FVVLSPFGLPYWEKLLLDPFGSHRDVGYVVICPENEALLRGAKSFFKDLTATYEACRLGQ
HRPICKTHADGILRVGTAEGRNRAEQPLSDWFLKMASSNGNSEAFSKLKLYAQVCRHDLA
PYLAGQSLDSSLLNQRGPTVASPQFSSSQSPTTPFSGPQSATSSSTAQPANTNSTPPSST
GPQAMGGIGGVGMPSAKPSSYTPYGTSGLQGSVSQNGPQSGAQTAGENGPTANQPQASTE
PVETTLERDKVGVPTDGESHAVTFPPSIVVYIVDPFSYGEMDTHSSVWTLGLLRCYVEML
QFLPPHIRNSVSVQIIPCQYLLQPVRIEERHLYGQHLKSLAFSVFTQCRRPLPGNTNIKA
LTGFGPGLAIDMALRSTERPECLRLYTPPFILAPIKDKQTELGETFGEASQKYNVLFVGY
CLSHDQRWLLASCTDQSGELLETCIISIDVPNRARRKKGSARRLGLQKLWEWCLGLVQVT
SLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRMCGISAADTPSILSACL
VAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQVNNG
TTEQNLDIAFNPINPDGSDGMGIFDLFDNDMVDPDLINILPNSPTTSPVHSPGGHYHQGG
DGSKGQSTDRMESHEEALNILQQPMALGYFISTAKAGPLPDWFWSACPQAQNQCPLFLKA
SLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPV
HFVVLNQMYNFIMNML
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgttttgtaccaaacggggccagtttggaggactgccactccaacctattt
tgcctggctgacctgactgggataaaatggcgacgttttgtgtggcaggggcccacttcc
tcgcccatcctgttccccgtgacggaggaggaccccatcctgtgcagcttcagtcggtgc
ctggcggccgatgtgctaagcgtgtggcgaaggcaccacaccccgggtcgccgcgagctc
tggctcttctggtggggggatgaccccagcttcgccgagctcatccaccacgagctgtca
agtgaggaggacggcgagtgggagagtggcttgtcctatgagtgccgcacactcctgttc
aaagctgtccataacctgttggagcgttgcctcatgaatcgcagctttgtccgtattggc
aagtggtttgtcaagccctacgagaaggatgagaagcccatcaataagagtgagcacttg
tcgtgtgcgttcacctttttcctgcatggggacagtaacgtgtgcaccagcgtggagatt
gcccagcaccagcctgttcagaggctaggtgaagaacatctgagcctggcacaacaaaat
gccagccccctgcaagtcatcttgagtccatacggtctgaacgggacggtcacgggccag
tccttcaaaatgtctgaccaccccacccagaaacttattgaggagtggaggcagttctat
cccattagccccagcgccaaggaccgccccgaggacaagatggaggatgcagactgggag
gacgactcactagcagccgtggaggtccttgttgctggagtgaggatggtgtaccctgcc
tgtctagtactggttccccagtcagacctacctgccctggccccacagggatcagccaac
ccctcacccgtcctgtgtgagggccagggggcccacagagaccctgccatgtcctctgtc
acccttacccctcccacatcaccggaggaggcccaaacagattctcaggcagcacagagg
tggttgaagctctgctcgacagtggatggtttcagctccaacagcagcggtatccacggc
agcaagatcccccgcaggctggctgcccaggtggtggagagcgtgtggcaggagtgtact
accaaccgggcccagaacaagaggaagtttgctacattgaccaacggtacctgtgaggag
gaggagggggacaaaacaggagtgtgggattttgtggagttctcgcatagggcacactgc
aactgctcaaggcataaaaaccagaagcaacgatcaggcagcacctcaggaaaccccccg
tcggtgggccagccctcacagccgctgcccaaacacaagctgggcgagaagctggagaag
ggggagaagcagcagaagaggccccagacacccttccaccaccgcagctatgtgtttgag
gagcaggccatggagccccagaggctgtgtatgagaacccaggatgagggcccctacccc
agcctgcaccacgtggacacggccccttccaaagcccccatgttgcacccccacaggccc
ctccaagacctggccggctccccccagccccctcctctcagcccccacccctgcgagcgc
ggggaggaagaccctggggccatgaagagctcctccacacccatccaccaacacttttac
cccccctcctccgagccctgcctgctgccccaaaagacctcgtctgacgagccccacctg
gagcccctgcctctgcctttcccccctgcctaccctgattccctggaacccactgtctat
gtgggatcagccatcaaccccaacgaagactcggcccacaacccctggaagtacttcaac
ctgccacggaagaagacctcagacttcttcacaccactgttgcctgtggacaaactacag
gatgactccggggaaggaggagggcaggagaacattgtctctgtcacagaattgatgtct
ggctctggcaggcctctgaaggtgtctgaagacctggtgaggacctacacccagaggagg
aacagccacctggcggctgccatggctgacgaggaccaggaggaggaaccagacccctac
gccttcgtggagggagacgaggagttcactttcactgacaagaaggacaaacctggttca
gacagagagaccagcaagagacacaagggtgacgatggcagtgggacctcagcagatgat
ggtcagggtgcagctggtggaaagcctgtaccctccaccagcctcatccatgagacagac
ctggctgtgtccatcaacgacctggacaacctcttcaactcagacgaagatgagctagcg
cctggatccaggagagcaggagttaatggagacaagtttggcagtaaggaacacaaaaca
tcaaatctggaccctctgtcctgcataagctcagctgacctgcacaagatgttccccacc
cctccctccctggagcagcacatcatgggctactcccccatgaacactggggggaaggac
tacggtggcctggaggctggggtgggcctcactctgctggatgggagccagtttagcagc
cactacaagatggaggtggaggaaggcttttgcagccccaagccttctgagatcaaggac
ttctcatttgtttataagtcagaggcgtgcaaggcattcacgggctgctccatgtttgct
ccgctgaagatgctgcccagtcagtgtatgatgcccatcaagctgccagaggactgtgtt
tacacacccagctggaacatgggcaaactggagctcataccccctgtgccaaccatgggc
ctcctcaccaaagacggtaacatccccagtgtggagccagactaccagagttacacaccg
cagacccacactcccttcatgtccaacagtgccccacccagcaacagcggcacgggcatc
ctgccctccccggccacaccccgcttctccgcccccaccccacgcactccccgtaccccg
cgcaccccaagaggtcctgccagtgtccagggatcgctcaaatacgacaactctgacctc
tactcgcccgcctccaccccttccacttgccgacctctcagctcagtggagccagccact
gtgccctccatccctgaggcccacagcctctacgtcaccctcatcctctctgagtccgtc
atgaacctcttcaaggactgtaactttgacagctgctgcgtgtgtgtgtgcaacatgaac
attcgtggcgctgatgtgggcgtgtatcttaacgacaacggcgaggcccagtacccctgc
acttgtggtttcagcgccgtggtcaaccgtcgctacggcagctcggccggtctcttcctg
gaggatgagctggacgtggtggggcgtggctcggacgccggccgggactctgagaggcgt
ttccaggagctgcgcgctgcctcccttcacaggatcggcaaccccacagagaggccccca
gacgagctcatcctgttgctgcaggaccagtgcaccaacccattctcccgcatggctggg
gtggagtaccccaaagcgttgtcctccggtccctctcactcttctctacgggtagaggag
agggactgctataacgactgctacatggctctggagcatggccggcagttcatggacaac
atgtcaggaggcaaggtggacgaggcgctggttaagagcacgtgtctacacaactggcct
aaacgcaaaactgcagaagtgagcaggctgttctctcaggatatactgcgggtgctgctc
tccctccagcctgtactccaagatgccatccagaagaagagaagcgtacgttcctggggc
gttcagggacctctcacctggcagcagtttcacaagatggccggcaggggatcctacggc
actgacgagtctccagagcccctccccatccctaccttcctggtgggctatgagtatgac
tttgtggtgctgtcgcccttcggcctgccttactgggaaaagttgctgctggaccccttc
ggctcccacagggacgtgggatatgttgtcatctgtcctgagaatgaggctctgctccgt
ggggctaagagcttcttcaaggaccttacggccacgtacgaggcctgtcgactgggtcag
cacagaccaatctgtaagactcatgcagatggaatattgcgggttggtacagcagagggc
aggaaccgggcagagcagcctctcagtgactggttcctcaagatggccagcagtaacggg
aacagcgaagccttcagcaaactcaaactgtacgctcaagtgtgccggcatgacctggct
ccatacctggctggacagtctctggatagctctctgttgaaccagcgtggccccactgtg
gcctccccccagttctcctcctcccagtcccccacgacccccttctcaggtccccagagc
gccaccagcagcagcactgcccagcctgccaacaccaacagcaccccaccctcctccaca
ggcccccaggcaatgggagggatagggggggtaggaatgccgtcggccaagcccagctcc
tacacaccatatgggacatcaggcctgcagggcagcgtctcccagaatgggccccagtcg
ggtgctcagactgcaggggagaatggccccactgccaaccagccccaggccagcactgag
cccgtagagaccacattagagagagacaaggtgggcgtccctacagacggagagtcccac
gctgtgacgtttcccccgtccattgtggtttacattgtggaccccttcagctacggggag
atggacacccactccagtgtgtggacgctgggtctgctgcgctgctatgtggagatgctc
cagttcctgccgcctcacatcagaaactctgtgtctgtgcagatcattccctgtcagtac
ctgttgcagcctgtgcgcattgaggagcgccatctgtacggtcagcacctcaagtccctg
gccttctcggtgttcacccagtgcagacgacccctccccggcaacaccaacatcaaggct
ctgacgggcttcggcccaggcctggccatcgacatggcactgaggagcacagagaggcca
gaatgtctgcgtctgtacacaccaccgttcatcctggcacccatcaaggacaagcagaca
gagctaggggagacgttcggtgaggcctctcagaagtacaatgtgctgtttgtgggctac
tgcctgtcgcatgaccaacgctggctcctagcctcctgtactgaccaatcaggagagctt
ctggagacatgcatcatcagcatcgacgtgcctaacagggctcggaggaaaaagggttca
gccagacgactgggcctgcagaagctgtgggagtggtgtctaggcttggtgcaagtgaca
tcactgccctggagggtggtgattggccgcctgggcagaatgggccacggagagttacga
gattggagtattctgctgagcagaaggaacctgcagtctctcagcaagcgcctcaaggag
acctgcaggatgtgtggcatctctgccgcagacactcccagcatcctcagcgcctgcctg
gtcgccatggagcctcaaggctcctttgtcatcatgccagactctgtgtcgacaggctca
gtgttcggccgcagcaccactctgaacatgcagacgtcccagctgagcactcctcaggat
acgtcctgcacccacatcctggtgttccccacctcggccatggtgcaggtgaacaacggc
accaccgaacagaacctagacatcgccttcaaccccataaaccctgatggttcagatggg
atgggcatctttgacctgtttgataacgacatggtggaccctgacctcatcaacatcctg
cctaactcccccaccacctcccctgttcactccccgggtggacactatcaccagggggga
gatggcagcaagggccaaagcacagaccgtatggagtcccatgaagaggccctgaacatc
ctacagcagcctatggctctgggctacttcatctccacagccaaggctggccccctgcct
gactggttctggtcagcctgcccccaggcacagaaccagtgcccactgttcctcaaggcc
tccctgcacctccacgtgtcctcggtccaatcagacgagctcctccacagcaaacactcc
caccctctggactccaaccacacctcagatgtgctcaggtttgtgctggagcagtacaac
gccctctcctggctgacgtgtgaccctgccactcaggaccggcgctcctgtctgcctgtt
cactttgtggtgctcaaccagatgtacaactttatcatgaacatgctctga
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